| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751363
Identifier: 170751363
GI number: 170751363
Start: 5304971
End: 5305531
Strand: Reverse
Name: 170751363
Synonym: Mrad2831_4982
Alternate gene names: NA
Gene position: 5305531-5304971 (Counterclockwise)
Preceding gene: 170751381
Following gene: 170751357
Centisome position: 87.29
GC content: 75.94
Gene sequence:
>561_bases GTGGGACGCGGACAGGACCGGCCGCTCGTGTTCATCGGCGACTCGATCACCGCCGCCTGGGGCGCGGTGCGGGCCGAGAC CTTCGCGCGCCACGGCTTCGTGGCCCGGGGCGTCCCGGGCGAGACGAGCGGGCAGATCCGGGCGCGCTTCCTGCGCGACG CGGCCGGGGCCCGGGGCGTTCACCTGATGTGCGGGATCAACGACATCGCGGAGATCGGCGGCCCGGTCCCGGACCGGGCG ATCGCCGGGAACATCATGGCCATGGGGCGGATGGCCTTCGCGGCCGGGCTGCCGCTCACGATCGGCACCGTGATGCCGAG CGACTTCTGGGGCTGGCGCCCCGAGCTGCGGCCGGTGGCGCGGATCCGCGCCCTGAATGGGTGGCTGCGCGCCTACTGCG CGGCGGGTGCGGCCCGCCTCGTCGATTACGGGCCGCCGCTCGCCACGGAGGCGGGCGCGCTCCGGCGCGAGTTCACCGAC GACGGCATCCACCTCAACGGCGCGGGCTACGCGGCGGTGGAGCCGGCGATGCTCCGGGCCCTCGGCGCAGGCCCGGAATG A
Upstream 100 bases:
>100_bases TTCGGGCCTGGGTTCGGGCATGGGCGTGCTCCGGAAACTGGCCTCCCCGGTCGCGCCGGGCTAAGGCGGCCCGCGCCGTG GGCAGCGCCGAGGGGGATGC
Downstream 100 bases:
>100_bases CGGCGGCCGCGGGGTCGGGCGCTCACGCGCCCAGCGCCAGCCAGTAGGTCGGCACCGACCCGACGCCCGCCACCGAGCCG GCCGCCGCGCGGCGGGTGCG
Product: G-D-S-L family lipolytic protein
Products: NA
Alternate protein names: Acylhydrolase; Lipolytic Protein G-D-S-L Family; Lipolytic G-D-S-L; Gdsl-Family Lipolytic Protein; Lipase/Acylhydrolase GDSL Family; Capsular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MGRGQDRPLVFIGDSITAAWGAVRAETFARHGFVARGVPGETSGQIRARFLRDAAGARGVHLMCGINDIAEIGGPVPDRA IAGNIMAMGRMAFAAGLPLTIGTVMPSDFWGWRPELRPVARIRALNGWLRAYCAAGAARLVDYGPPLATEAGALRREFTD DGIHLNGAGYAAVEPAMLRALGAGPE
Sequences:
>Translated_186_residues MGRGQDRPLVFIGDSITAAWGAVRAETFARHGFVARGVPGETSGQIRARFLRDAAGARGVHLMCGINDIAEIGGPVPDRA IAGNIMAMGRMAFAAGLPLTIGTVMPSDFWGWRPELRPVARIRALNGWLRAYCAAGAARLVDYGPPLATEAGALRREFTD DGIHLNGAGYAAVEPAMLRALGAGPE >Mature_185_residues GRGQDRPLVFIGDSITAAWGAVRAETFARHGFVARGVPGETSGQIRARFLRDAAGARGVHLMCGINDIAEIGGPVPDRAI AGNIMAMGRMAFAAGLPLTIGTVMPSDFWGWRPELRPVARIRALNGWLRAYCAAGAARLVDYGPPLATEAGALRREFTDD GIHLNGAGYAAVEPAMLRALGAGPE
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19565; Mature: 19434
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGQDRPLVFIGDSITAAWGAVRAETFARHGFVARGVPGETSGQIRARFLRDAAGARGV CCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCE HLMCGINDIAEIGGPVPDRAIAGNIMAMGRMAFAAGLPLTIGTVMPSDFWGWRPELRPVA EEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHH RIRALNGWLRAYCAAGAARLVDYGPPLATEAGALRREFTDDGIHLNGAGYAAVEPAMLRA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH LGAGPE HCCCCC >Mature Secondary Structure GRGQDRPLVFIGDSITAAWGAVRAETFARHGFVARGVPGETSGQIRARFLRDAAGARGV CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCE HLMCGINDIAEIGGPVPDRAIAGNIMAMGRMAFAAGLPLTIGTVMPSDFWGWRPELRPVA EEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHH RIRALNGWLRAYCAAGAARLVDYGPPLATEAGALRREFTDDGIHLNGAGYAAVEPAMLRA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH LGAGPE HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA