| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is cysJ [H]
Identifier: 170748716
GI number: 170748716
Start: 2429517
End: 2431121
Strand: Reverse
Name: cysJ [H]
Synonym: Mrad2831_2298
Alternate gene names: 170748716
Gene position: 2431121-2429517 (Counterclockwise)
Preceding gene: 170748717
Following gene: 170748715
Centisome position: 40.0
GC content: 70.78
Gene sequence:
>1605_bases ATGACCCAGCACGTCTCGCCCCCCCTCGTCCTGATCCCCGAGACCGCGCCCTTCAACGAGGACCAGCGCGCCTGGCTCTC GGGCTACTTCGCGGCCCTGCTCGGCCCCTCCGCCGCGGGTGCCACGGCGCTGGCGCCGGGCGATGCTCCCGCGAGCGGCC CGAAGCTCGCCGACAACGACGACGCCCCCTGGCACGACCCCTCCGTGCCGATCGGCGAGCGGATGGAGATGGCCAAGGAT CGGCCCGAGCCGCAGAAGCTGATGGCCGCCATGGCCCAGCAGGATTGCGGCCAGTGCGGCTACAACTGCGCCGACTACGC CAACGCGATCTTCCTGAAGAACGAGGCGCGCCTGAACCTTTGCCAGCCCGGCGGCAAAGAGACCCTGCGCATGCTCAAGA AGCTCGACGAGGAGTTCGGCGCCGCCGGAGGCGCCCCGGCTGCCCCGAAGGTGGACGACGACGCCCCGAAGGCGGCGGCC GATCTGGGCCCGCTCGGCTACTGCCGCGAGAACCCGGTCGAGGCGCTGTTCCTGTCCCGCCGCCGCCTCAACGATCCGGG CGGCGAGAAGGAGACGTGGCACATCGAGATCGGCCTGGACGGCACGCCGATCCAGTACGAGGTCGGCGACTCCCTCGGCC TGTTCCCCGCCAACGCCCCGGCGCTGGTGGACGCCGTGATCGCGGAGCTCGGCGCCCGGCCCGAGCGGGTGATCGGCGAG AAGACCCTGCGCGAGCACCTGCTGATGAACTACGCGCTCGGCGCGGCGCCCGACAACCTCTACCAGCTCCTGTCGCTGCT CACCTCCGGAGCGGCGCGCAAGAAGGCGCAGGCGCTCGCCTCCGGCGAGGATCCGGACGGCGACGCCGCCTATCTCGACG TGCTCGGCGCGCTCCACAAGTTCCCGGGCGCGCGGCCCGACGCCGAGGTCTTCCTCGAGGCCCTGGACGAGCTCCAGCCG CGGCTCTACTCGATCTCGTCCTCGCCGAAAATGGATGTCGGCCGGGTGTCGCTGACGGTGGACGCGGTGCGCTACAATCA CCGCTCGCGGCTGCGGCTCGGCGTCGCTTCGACCCATCTCGGCGAGCGCCTGCCCGAGCAGACCAAGGTGAAGGTCTATC TGCAGAAGGCGCACGGCTTCGGCCTGCCGGCCGACCTGGCGAAGGACGTGATCATGTGCGGTCCCGGCACCGGCATCGCG CCGTTCCGGGCCTTCCTGCGCGAGCGCGCCGCCACGCGGGCGCCGGGCCGCAACTGGCTGTTCTACGGCCACCAGCGGCA GGCCAGCGACTTCTTCTACAAGGACGAGCTGAACAGCCTGAAGGACGACAAGGTGCTCACCCGCCTGTCCCTGGCGTGGT CGCGCGACGGCACGGAGAAGACCTACGTCCAGGACCGGATGCGCGAGAACGGCGCCGAGCTGTGGAAGTGGCTCGAGGGC GGCGCGCATTTCTACGTCTGCGGCGACGCCAAGCGCATGGCCAAGGACGTCGAGCGGGCGATCATCGACGTGGCGGCGCA GTTCGGCGGCAAGAGCCCCGAGGACGCGGTGGCCTACCTCGCGGCGCTCAAGAAGGCCGGGCGGTATCAGGCTGACGTCT ACTGA
Upstream 100 bases:
>100_bases GCCAGGGCCCCGAGGAGAGCTTCCAGGCCTTCACCAGCCGCACCGGCGCGGAGGCGCTCCGCGACGCCGCCGAGGACCAG CCCGCCCTGAAGGCCGCCGC
Downstream 100 bases:
>100_bases GCACCGGTAACCCTCCCCCCTGTGCCGGGGGAGGGCGATGCGGCGCGGCGCTTGCTCCCGCCCAGGACGACCCTTCGAGG ATCCAGCCATGACCCAGCCA
Product: sulfite reductase
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MTQHVSPPLVLIPETAPFNEDQRAWLSGYFAALLGPSAAGATALAPGDAPASGPKLADNDDAPWHDPSVPIGERMEMAKD RPEPQKLMAAMAQQDCGQCGYNCADYANAIFLKNEARLNLCQPGGKETLRMLKKLDEEFGAAGGAPAAPKVDDDAPKAAA DLGPLGYCRENPVEALFLSRRRLNDPGGEKETWHIEIGLDGTPIQYEVGDSLGLFPANAPALVDAVIAELGARPERVIGE KTLREHLLMNYALGAAPDNLYQLLSLLTSGAARKKAQALASGEDPDGDAAYLDVLGALHKFPGARPDAEVFLEALDELQP RLYSISSSPKMDVGRVSLTVDAVRYNHRSRLRLGVASTHLGERLPEQTKVKVYLQKAHGFGLPADLAKDVIMCGPGTGIA PFRAFLRERAATRAPGRNWLFYGHQRQASDFFYKDELNSLKDDKVLTRLSLAWSRDGTEKTYVQDRMRENGAELWKWLEG GAHFYVCGDAKRMAKDVERAIIDVAAQFGGKSPEDAVAYLAALKKAGRYQADVY
Sequences:
>Translated_534_residues MTQHVSPPLVLIPETAPFNEDQRAWLSGYFAALLGPSAAGATALAPGDAPASGPKLADNDDAPWHDPSVPIGERMEMAKD RPEPQKLMAAMAQQDCGQCGYNCADYANAIFLKNEARLNLCQPGGKETLRMLKKLDEEFGAAGGAPAAPKVDDDAPKAAA DLGPLGYCRENPVEALFLSRRRLNDPGGEKETWHIEIGLDGTPIQYEVGDSLGLFPANAPALVDAVIAELGARPERVIGE KTLREHLLMNYALGAAPDNLYQLLSLLTSGAARKKAQALASGEDPDGDAAYLDVLGALHKFPGARPDAEVFLEALDELQP RLYSISSSPKMDVGRVSLTVDAVRYNHRSRLRLGVASTHLGERLPEQTKVKVYLQKAHGFGLPADLAKDVIMCGPGTGIA PFRAFLRERAATRAPGRNWLFYGHQRQASDFFYKDELNSLKDDKVLTRLSLAWSRDGTEKTYVQDRMRENGAELWKWLEG GAHFYVCGDAKRMAKDVERAIIDVAAQFGGKSPEDAVAYLAALKKAGRYQADVY >Mature_533_residues TQHVSPPLVLIPETAPFNEDQRAWLSGYFAALLGPSAAGATALAPGDAPASGPKLADNDDAPWHDPSVPIGERMEMAKDR PEPQKLMAAMAQQDCGQCGYNCADYANAIFLKNEARLNLCQPGGKETLRMLKKLDEEFGAAGGAPAAPKVDDDAPKAAAD LGPLGYCRENPVEALFLSRRRLNDPGGEKETWHIEIGLDGTPIQYEVGDSLGLFPANAPALVDAVIAELGARPERVIGEK TLREHLLMNYALGAAPDNLYQLLSLLTSGAARKKAQALASGEDPDGDAAYLDVLGALHKFPGARPDAEVFLEALDELQPR LYSISSSPKMDVGRVSLTVDAVRYNHRSRLRLGVASTHLGERLPEQTKVKVYLQKAHGFGLPADLAKDVIMCGPGTGIAP FRAFLRERAATRAPGRNWLFYGHQRQASDFFYKDELNSLKDDKVLTRLSLAWSRDGTEKTYVQDRMRENGAELWKWLEGG AHFYVCGDAKRMAKDVERAIIDVAAQFGGKSPEDAVAYLAALKKAGRYQADVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI127139033, Length=401, Percent_Identity=33.1670822942643, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI7657393, Length=392, Percent_Identity=30.1020408163265, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI10835173, Length=406, Percent_Identity=32.2660098522167, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI221316709, Length=392, Percent_Identity=29.8469387755102, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI221316705, Length=401, Percent_Identity=29.426433915212, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI24041029, Length=395, Percent_Identity=31.3924050632911, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI169790958, Length=410, Percent_Identity=28.0487804878049, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI169790956, Length=410, Percent_Identity=28.0487804878049, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI40254422, Length=375, Percent_Identity=31.4666666666667, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI221316707, Length=437, Percent_Identity=26.7734553775744, Blast_Score=120, Evalue=3e-27, Organism=Escherichia coli, GI1789123, Length=400, Percent_Identity=41.25, Blast_Score=281, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17554134, Length=394, Percent_Identity=32.48730964467, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17531441, Length=416, Percent_Identity=25, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17566446, Length=374, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321832, Length=438, Percent_Identity=28.310502283105, Blast_Score=134, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6321143, Length=385, Percent_Identity=27.2727272727273, Blast_Score=127, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6325305, Length=382, Percent_Identity=24.3455497382199, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI24582192, Length=400, Percent_Identity=31.5, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI17137192, Length=400, Percent_Identity=31.5, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI24583543, Length=389, Percent_Identity=33.1619537275064, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI78706876, Length=389, Percent_Identity=33.1619537275064, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI78706872, Length=389, Percent_Identity=33.1619537275064, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24660907, Length=277, Percent_Identity=28.158844765343, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24660903, Length=277, Percent_Identity=28.158844765343, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24647438, Length=384, Percent_Identity=24.21875, Blast_Score=83, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 58011; Mature: 57880
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHVSPPLVLIPETAPFNEDQRAWLSGYFAALLGPSAAGATALAPGDAPASGPKLADND CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCC DAPWHDPSVPIGERMEMAKDRPEPQKLMAAMAQQDCGQCGYNCADYANAIFLKNEARLNL CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCEEE CQPGGKETLRMLKKLDEEFGAAGGAPAAPKVDDDAPKAAADLGPLGYCRENPVEALFLSR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHH RRLNDPGGEKETWHIEIGLDGTPIQYEVGDSLGLFPANAPALVDAVIAELGARPERVIGE HHCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH KTLREHLLMNYALGAAPDNLYQLLSLLTSGAARKKAQALASGEDPDGDAAYLDVLGALHK HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FPGARPDAEVFLEALDELQPRLYSISSSPKMDVGRVSLTVDAVRYNHRSRLRLGVASTHL CCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEEHHHHCCCHHEEECHHHHHH GERLPEQTKVKVYLQKAHGFGLPADLAKDVIMCGPGTGIAPFRAFLRERAATRAPGRNWL HHHCCCCHHEEEEEEHHCCCCCCHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCEE FYGHQRQASDFFYKDELNSLKDDKVLTRLSLAWSRDGTEKTYVQDRMRENGAELWKWLEG EECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC GAHFYVCGDAKRMAKDVERAIIDVAAQFGGKSPEDAVAYLAALKKAGRYQADVY CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TQHVSPPLVLIPETAPFNEDQRAWLSGYFAALLGPSAAGATALAPGDAPASGPKLADND CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCC DAPWHDPSVPIGERMEMAKDRPEPQKLMAAMAQQDCGQCGYNCADYANAIFLKNEARLNL CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCEEE CQPGGKETLRMLKKLDEEFGAAGGAPAAPKVDDDAPKAAADLGPLGYCRENPVEALFLSR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHH RRLNDPGGEKETWHIEIGLDGTPIQYEVGDSLGLFPANAPALVDAVIAELGARPERVIGE HHCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH KTLREHLLMNYALGAAPDNLYQLLSLLTSGAARKKAQALASGEDPDGDAAYLDVLGALHK HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FPGARPDAEVFLEALDELQPRLYSISSSPKMDVGRVSLTVDAVRYNHRSRLRLGVASTHL CCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEEHHHHCCCHHEEECHHHHHH GERLPEQTKVKVYLQKAHGFGLPADLAKDVIMCGPGTGIAPFRAFLRERAATRAPGRNWL HHHCCCCHHEEEEEEHHCCCCCCHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCEE FYGHQRQASDFFYKDELNSLKDDKVLTRLSLAWSRDGTEKTYVQDRMRENGAELWKWLEG EECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC GAHFYVCGDAKRMAKDVERAIIDVAAQFGGKSPEDAVAYLAALKKAGRYQADVY CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA