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The map label for this gene is gidB

Identifier: 170762322

GI number: 170762322

Start: 43662

End: 44372

Strand: Direct

Name: gidB

Synonym: UPA3_0039

Alternate gene names: 170762322

Gene position: 43662-44372 (Clockwise)

Preceding gene: 170762033

Following gene: 170762242

Centisome position: 5.81

GC content: 24.05

Gene sequence:

>711_bases
ATGACTAGAAAAGATTTTTTTAATGTTTTAACTAGATATTTTCCTTGAGTTGATGAACAAACTTTTATGAGTTTTGAAAA
GTATAAAACAATTATTCAAAAATATAATCAAATTTTTAATTTGACAAGACTTGATAGTGATGATAAGATTTACCAAAATT
TCTTTTTAGATTCACTTGCACCTTATAAAGAACTAGATTTTTTTACACAAAATACTAATCTTAAATTAATTGATATTGGT
TCTGGTTCTGGAATTCCAGGGGTTGTTTTAAAGATTATTTTTAAAAATTTAAATTTAACATTATTAGAAGCTAATCAAAA
ACGATGTGAATTTCTTAAAATATTAACTCAAGAATTAGGTTTAAATGATGTCTTAATTTGAAATATGCGTGCTGAAGATT
TAACACAATCGATGCGTGAATCTTTTGATATTGCAACTTCAAGAGCTGTTGCATCATTAGATAAAATTTTAGAAATTTCA
GCCGCATTTGTTAAAGTTAATGGTTATTTAATTCAACCAAAATCAATAAAATTTTATGAAGAAGAACTAAAAGCAAAAAA
TATTATAAAAACTTTGTATTTAGAAAGAATCGCTTTAAAAGATTTTTGAGAAAATGATTATCATCATTTAGTTGGTGTTT
ATTTAAAAAAACAAATCACTCCACTACAATTTCCTCGTCCTTGAAATCTAATTCTTAAAAAACCACTCTAA

Upstream 100 bases:

>100_bases
AATAAGATTAAACCTCTTGATCTTGAACAAGCAAGTCGGATTAGTGGGGTTAATTTAACAGACATTGCAATGATTAAATA
TTATTTAGAAAGAATTAAAA

Downstream 100 bases:

>100_bases
TTATTTATAAAGGAGTTATATTATGAGTTCATTACCAGTTATTATTTTAGTAATTGGCATTTTTGGGTCTATTTTTCTAG
TAATAGGATATATTCCCCAA

Product: methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTRKDFFNVLTRYFPWVDEQTFMSFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKLIDIG
SGSGIPGVVLKIIFKNLNLTLLEANQKRCEFLKILTQELGLNDVLIWNMRAEDLTQSMRESFDIATSRAVASLDKILEIS
AAFVKVNGYLIQPKSIKFYEEELKAKNIIKTLYLERIALKDFWENDYHHLVGVYLKKQITPLQFPRPWNLILKKPL

Sequences:

>Translated_236_residues
MTRKDFFNVLTRYFP*VDEQTFMSFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKLIDIG
SGSGIPGVVLKIIFKNLNLTLLEANQKRCEFLKILTQELGLNDVLI*NMRAEDLTQSMRESFDIATSRAVASLDKILEIS
AAFVKVNGYLIQPKSIKFYEEELKAKNIIKTLYLERIALKDF*ENDYHHLVGVYLKKQITPLQFPRP*NLILKKPL
>Mature_235_residues
TRKDFFNVLTRYFP*VDEQTFMSFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKLIDIGS
GSGIPGVVLKIIFKNLNLTLLEANQKRCEFLKILTQELGLNDVLI*NMRAEDLTQSMRESFDIATSRAVASLDKILEISA
AFVKVNGYLIQPKSIKFYEEELKAKNIIKTLYLERIALKDF*ENDYHHLVGVYLKKQITPLQFPRP*NLILKKPL

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=172, Percent_Identity=27.906976744186, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: 2.1.-.-

Molecular weight: Translated: 27024; Mature: 26893

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKDFFNVLTRYFPVDEQTFMSFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAP
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
YKELDFFTQNTNLKLIDIGSGSGIPGVVLKIIFKNLNLTLLEANQKRCEFLKILTQELGL
HHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCC
NDVLINMRAEDLTQSMRESFDIATSRAVASLDKILEISAAFVKVNGYLIQPKSIKFYEEE
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEECCCCCHHHHHH
LKAKNIIKTLYLERIALKDFENDYHHLVGVYLKKQITPLQFPRPNLILKKPL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
>Mature Secondary Structure 
TRKDFFNVLTRYFPVDEQTFMSFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAP
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
YKELDFFTQNTNLKLIDIGSGSGIPGVVLKIIFKNLNLTLLEANQKRCEFLKILTQELGL
HHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCC
NDVLINMRAEDLTQSMRESFDIATSRAVASLDKILEISAAFVKVNGYLIQPKSIKFYEEE
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEECCCCCHHHHHH
LKAKNIIKTLYLERIALKDFENDYHHLVGVYLKKQITPLQFPRPNLILKKPL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA