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The map label for this gene is fanC [H]

Identifier: 170680375

GI number: 170680375

Start: 4002933

End: 4003460

Strand: Reverse

Name: fanC [H]

Synonym: EcSMS35_3927

Alternate gene names: 170680375

Gene position: 4003460-4002933 (Counterclockwise)

Preceding gene: 170682468

Following gene: 170681449

Centisome position: 78.99

GC content: 39.58

Gene sequence:

>528_bases
ATGAAAAAATTGGTTTTAGGTTCAGCTATTCTTGCTGTACTTGGGATGACTTCTACTGCAATGGCTGCAAACAGTGGTAC
TGTTAATTTTACAGGGGCTGTATCCAGCGCAACGTGTGATCTTAAAGTTACAAATGCTTCTGGAGCTGAGATACCTACAG
TTGATTTAGGTACTGTATCAACGACGGGAACACCTGCTTCAGTTCAATTTAAGCTTGTTCCTTCAGATAATGCTTGCTTG
GCAAAAAATGGAGCCCAGATTAGCTGGACATCAAATAATTTAACAACCCAAGGTTTTAGCAATGCAACTACGGGGGGAAC
AAATGCATATATGGCATTACTTACTTCTAATGCCCAAGAAACTGGTGCGAGCTCATATGTTAAATCCGGTCAAACTACTT
TTAACTATCAAGTAACTAGTGGCGGTATTCGATCTTTTGATTACAGTGCTTCGTTAGTTAAACCTACTGGTACTGTGACT
CCAGGCGCATTTTCAACTTCAGCAAGTTATGTTGTTGCTTATAAATAA

Upstream 100 bases:

>100_bases
AGGTAATTTTTGCGACGTTCATGAACTTCTGGGCATGAACAAATATAGGACTAACCGAATTTGGGGCTAACAATTCTTTA
AAGGCTTTAAGGAGCATTAA

Downstream 100 bases:

>100_bases
TATATGAGCGAAGGAAGGGAGGATTAATCTCCTCCCTTCTTATTACCTGATGTTTATGGCAAGGGAAAATAATGAAAAAA
GAAATATTTATTGCCGCTAT

Product: putative fimbrial protein FanC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKKLVLGSAILAVLGMTSTAMAANSGTVNFTGAVSSATCDLKVTNASGAEIPTVDLGTVSTTGTPASVQFKLVPSDNACL
AKNGAQISWTSNNLTTQGFSNATTGGTNAYMALLTSNAQETGASSYVKSGQTTFNYQVTSGGIRSFDYSASLVKPTGTVT
PGAFSTSASYVVAYK

Sequences:

>Translated_175_residues
MKKLVLGSAILAVLGMTSTAMAANSGTVNFTGAVSSATCDLKVTNASGAEIPTVDLGTVSTTGTPASVQFKLVPSDNACL
AKNGAQISWTSNNLTTQGFSNATTGGTNAYMALLTSNAQETGASSYVKSGQTTFNYQVTSGGIRSFDYSASLVKPTGTVT
PGAFSTSASYVVAYK
>Mature_175_residues
MKKLVLGSAILAVLGMTSTAMAANSGTVNFTGAVSSATCDLKVTNASGAEIPTVDLGTVSTTGTPASVQFKLVPSDNACL
AKNGAQISWTSNNLTTQGFSNATTGGTNAYMALLTSNAQETGASSYVKSGQTTFNYQVTSGGIRSFDYSASLVKPTGTVT
PGAFSTSASYVVAYK

Specific function: FanC is the main component of the K99 fimbriae [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17670; Mature: 17670

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVLGSAILAVLGMTSTAMAANSGTVNFTGAVSSATCDLKVTNASGAEIPTVDLGTVS
CCCEEHHHHHHHHHCCCCHHEECCCCEEEEEECCCCEEEEEEEECCCCCCCCEEECCCEE
TTGTPASVQFKLVPSDNACLAKNGAQISWTSNNLTTQGFSNATTGGTNAYMALLTSNAQE
CCCCCCEEEEEEECCCCCEEECCCCEEEEECCCCEECCCCCCCCCCCCEEEEEEECCCCC
TGASSYVKSGQTTFNYQVTSGGIRSFDYSASLVKPTGTVTPGAFSTSASYVVAYK
CCCHHHHHCCCEEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKKLVLGSAILAVLGMTSTAMAANSGTVNFTGAVSSATCDLKVTNASGAEIPTVDLGTVS
CCCEEHHHHHHHHHCCCCHHEECCCCEEEEEECCCCEEEEEEEECCCCCCCCEEECCCEE
TTGTPASVQFKLVPSDNACLAKNGAQISWTSNNLTTQGFSNATTGGTNAYMALLTSNAQE
CCCCCCEEEEEEECCCCCEEECCCCEEEEECCCCEECCCCCCCCCCCCEEEEEEECCCCC
TGASSYVKSGQTTFNYQVTSGGIRSFDYSASLVKPTGTVTPGAFSTSASYVVAYK
CCCHHHHHCCCEEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1970318; 2886335 [H]