| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077554
Identifier: 170077554
GI number: 170077554
Start: 962596
End: 963216
Strand: Reverse
Name: 170077554
Synonym: SYNPCC7002_A0932
Alternate gene names: NA
Gene position: 963216-962596 (Counterclockwise)
Preceding gene: 170077558
Following gene: 170077550
Centisome position: 32.02
GC content: 50.4
Gene sequence:
>621_bases ATGAGCGAACAAAATCCCTACGAAACCCTTGGGCTTGCAAAAACGGCTTCATTTGAAGAGATCCAAGCAGCCAAACAAAA ACTAAGCGCCCAATACGAAGGCGATCGCGCCGTAGTGGACAAACTCGAAGCGGCCTACGATGCGATTATTATGGACCGCC TTAGACAACGACAACAGGGCACCCTCGATGTTCCGGATAAAATTCGCTTTGCAGAAACTTCTCAGAAGAAGGCGCAGGCG TCTCAACCGTTGGTGAAGTCTCCCGAACTGCCCCAGTGGTTGGTCAATTTACGGGATACACCAGAAACCAACACTCTATA TACTGCCCTCGGTGTCAATGGGGCGATCGCCATTGCCGGAATATTCCTCGCAACGGATCTCACCTCAACTCTTTTGACTG TGGCATTGATCGCGAATATTTATTTGCTCTACCGTAAAGAACAACGCTTTGGGCGAGCCGCTCTGATTGGGATTGTTGCC CTGGTCGCAGGCATTGCCCTCGGTAGTGGTGTGAATGCCATCCTCAATAGCACTGGCGTCACCGTGGCGATCGCCCCCGA ACATCTCCTATTAGTGCTCACCAGTATTGTTTTTGGCTTAGGGACGAGTTTCTTAAGATAA
Upstream 100 bases:
>100_bases CCGGAAAACGCTCATAATAATAAACTGTATGATGATTGGGTTACATTAAGAATCTAAGGATGTTCCAATAACCCAGTGGC ATGCTCACAGGAGGAGGAGA
Downstream 100 bases:
>100_bases TAATGACCTAGAGGGCATCTATTTGAGGCTGTCCTCAGCCCGGAGGCGATCGCTAACCCGGCGCAGAACACCGTTAATAA AACGATGGCCGTCTTCGTCA
Product: DnaJ domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSEQNPYETLGLAKTASFEEIQAAKQKLSAQYEGDRAVVDKLEAAYDAIIMDRLRQRQQGTLDVPDKIRFAETSQKKAQA SQPLVKSPELPQWLVNLRDTPETNTLYTALGVNGAIAIAGIFLATDLTSTLLTVALIANIYLLYRKEQRFGRAALIGIVA LVAGIALGSGVNAILNSTGVTVAIAPEHLLLVLTSIVFGLGTSFLR
Sequences:
>Translated_206_residues MSEQNPYETLGLAKTASFEEIQAAKQKLSAQYEGDRAVVDKLEAAYDAIIMDRLRQRQQGTLDVPDKIRFAETSQKKAQA SQPLVKSPELPQWLVNLRDTPETNTLYTALGVNGAIAIAGIFLATDLTSTLLTVALIANIYLLYRKEQRFGRAALIGIVA LVAGIALGSGVNAILNSTGVTVAIAPEHLLLVLTSIVFGLGTSFLR >Mature_205_residues SEQNPYETLGLAKTASFEEIQAAKQKLSAQYEGDRAVVDKLEAAYDAIIMDRLRQRQQGTLDVPDKIRFAETSQKKAQAS QPLVKSPELPQWLVNLRDTPETNTLYTALGVNGAIAIAGIFLATDLTSTLLTVALIANIYLLYRKEQRFGRAALIGIVAL VAGIALGSGVNAILNSTGVTVAIAPEHLLLVLTSIVFGLGTSFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22199; Mature: 22068
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQNPYETLGLAKTASFEEIQAAKQKLSAQYEGDRAVVDKLEAAYDAIIMDRLRQRQQG CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC TLDVPDKIRFAETSQKKAQASQPLVKSPELPQWLVNLRDTPETNTLYTALGVNGAIAIAG CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCHHHHHH IFLATDLTSTLLTVALIANIYLLYRKEQRFGRAALIGIVALVAGIALGSGVNAILNSTGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC TVAIAPEHLLLVLTSIVFGLGTSFLR EEEECHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEQNPYETLGLAKTASFEEIQAAKQKLSAQYEGDRAVVDKLEAAYDAIIMDRLRQRQQG CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC TLDVPDKIRFAETSQKKAQASQPLVKSPELPQWLVNLRDTPETNTLYTALGVNGAIAIAG CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCHHHHHH IFLATDLTSTLLTVALIANIYLLYRKEQRFGRAALIGIVALVAGIALGSGVNAILNSTGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC TVAIAPEHLLLVLTSIVFGLGTSFLR EEEECHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA