| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077558
Identifier: 170077558
GI number: 170077558
Start: 966311
End: 966703
Strand: Reverse
Name: 170077558
Synonym: SYNPCC7002_A0936
Alternate gene names: NA
Gene position: 966703-966311 (Counterclockwise)
Preceding gene: 170077563
Following gene: 170077554
Centisome position: 32.14
GC content: 36.13
Gene sequence:
>393_bases ATGAATAAACTGTTTACAGCAGCCCTTAGTGGTCTATCATTTATCGTTGTTCAACAGGCAAAAAGTGAACCTGTATTTAT TGATTTTGATTACCAGTATCGGTATGGTTATGAATATAATTACGACTATGATGACTATACCTATTACTACCACGCCAATG TCTACACCTATAGCGATGATTCGGTTGTATTCCCAGTCAAAGTACTCGTTAATGCTGCATGTCAACAACCACAATACCCC ATTGTATTAGGCTCTGAAGCAGATATAAGCAACGGTACAGATGTCTTGATCGAAGAATCTAATGTCATTATTGATAATGA TTTCAGTACAAATTGCTCTGCTTTTACAGAAAAAAATGTCCTGCTACTCTGGGAAGAAAACGAGATAAAATAG
Upstream 100 bases:
>100_bases CCAAGAGATGTGCTTTCAGCAAAAGTTCTTTTACAAAAAATTTTACTCAAACTGATCGCTCCAATATTGATCAATTAAGT CAAGGGATGGAGAAAGCAAA
Downstream 100 bases:
>100_bases GCGTCCCTTCTGGTTTTTCTTTCTGTAAAGCTGTACTGTTTAAAAATAGATCTTAAATTATAGAAGCACTTTGACTTTAT TTTCTTAAGTTATTGATACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MNKLFTAALSGLSFIVVQQAKSEPVFIDFDYQYRYGYEYNYDYDDYTYYYHANVYTYSDDSVVFPVKVLVNAACQQPQYP IVLGSEADISNGTDVLIEESNVIIDNDFSTNCSAFTEKNVLLLWEENEIK
Sequences:
>Translated_130_residues MNKLFTAALSGLSFIVVQQAKSEPVFIDFDYQYRYGYEYNYDYDDYTYYYHANVYTYSDDSVVFPVKVLVNAACQQPQYP IVLGSEADISNGTDVLIEESNVIIDNDFSTNCSAFTEKNVLLLWEENEIK >Mature_130_residues MNKLFTAALSGLSFIVVQQAKSEPVFIDFDYQYRYGYEYNYDYDDYTYYYHANVYTYSDDSVVFPVKVLVNAACQQPQYP IVLGSEADISNGTDVLIEESNVIIDNDFSTNCSAFTEKNVLLLWEENEIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15004; Mature: 15004
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLFTAALSGLSFIVVQQAKSEPVFIDFDYQYRYGYEYNYDYDDYTYYYHANVYTYSDD CCCHHHHHHCCEEEEEEEECCCCCEEEEEECEEEECEEECCCCCCEEEEEEEEEEEECCC SVVFPVKVLVNAACQQPQYPIVLGSEADISNGTDVLIEESNVIIDNDFSTNCSAFTEKNV CEEEEHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEECCCEEEECCCCCCCCEEECCCE LLLWEENEIK EEEEECCCCC >Mature Secondary Structure MNKLFTAALSGLSFIVVQQAKSEPVFIDFDYQYRYGYEYNYDYDDYTYYYHANVYTYSDD CCCHHHHHHCCEEEEEEEECCCCCEEEEEECEEEECEEECCCCCCEEEEEEEEEEEECCC SVVFPVKVLVNAACQQPQYPIVLGSEADISNGTDVLIEESNVIIDNDFSTNCSAFTEKNV CEEEEHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEECCCEEEECCCCCCCCEEECCCE LLLWEENEIK EEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA