| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is pgl [H]
Identifier: 170077550
GI number: 170077550
Start: 959175
End: 959933
Strand: Reverse
Name: pgl [H]
Synonym: SYNPCC7002_A0928
Alternate gene names: 170077550
Gene position: 959933-959175 (Counterclockwise)
Preceding gene: 170077554
Following gene: 170077549
Centisome position: 31.91
GC content: 55.2
Gene sequence:
>759_bases ATGACAAAATACCTGGAAATCCTGGATGACAAACCGGAACTCATTAAACGGGCGCTGCGTATTGTCATGGGCCGGATTGA GGAGGCGATCGCCCGTCGTGGTGTCTGTACCATTGCCCTTGCCGGCGGCAGTACCCCCAAACCTTTATACGAAAAATTAG CAGAGCAATCCCTCCCCTGGGCGCAACTCCACATTTTCTGGGGAGATGAACGCTATGTACCTGCCGAGCACCCCGATAGT AATCAACGGATGGCCCGGCTCGCCTGGCTGGATCAGGTGCCGATTCCGGAGGGCAATATTCACCCGATGCCGACCGCAGC CGCAGACCCCCAGCAAGATGCAGCGGCCTATGACGCAACGTTGAGAAATTTTTTTGGCGATCGCCCCTGGCCCAGTTTCG ATATTGTGCTGTTGGGCATGGGGGACGATGGTCATACTGCTTCGTTATTTCCCCAAACGGCGGCCCTAACCGTTGGCGAT CGCCTCATCACCGTTGGCGAGAAACAGGGAGAACCCAGGCTGACCTTTACCGTGCCCCTGATTAATGCCGCCCAGAACAT TCTTTTCCTAGTCGCTGGGGAAAATAAACAGGAGGCGCTCCAGAAAATTTTCCATAGCGATGCCGATGGGTTTGCCTATC CCAGTAAATTGATCAACCCAGACCACGGTGTCCTCTGGTGGCTCCTGGATGCTGCTGCTGGCGATCGCCTCGCCCCCGAT CAAGCAATCTATCAAACGAAATCTCGCCCAGAGCCTTAA
Upstream 100 bases:
>100_bases TTCATACTTTATGTATCAGTCAATGGGCGTTTATGGGTGTCACCACTAGAATGACGAGTAACGCTATTTTAGGGGGCATG GTTCGTCCTCTGTAAAGTTT
Downstream 100 bases:
>100_bases AATAAAACCATTCTTTTCCCTTTGACCACCCACTGTCATGATTAGTTGTCCCAACTGTAACCACCAAAATCCTGACGGCG CCGTCCAATGCGAAGCCTGT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTKYLEILDDKPELIKRALRIVMGRIEEAIARRGVCTIALAGGSTPKPLYEKLAEQSLPWAQLHIFWGDERYVPAEHPDS NQRMARLAWLDQVPIPEGNIHPMPTAAADPQQDAAAYDATLRNFFGDRPWPSFDIVLLGMGDDGHTASLFPQTAALTVGD RLITVGEKQGEPRLTFTVPLINAAQNILFLVAGENKQEALQKIFHSDADGFAYPSKLINPDHGVLWWLLDAAAGDRLAPD QAIYQTKSRPEP
Sequences:
>Translated_252_residues MTKYLEILDDKPELIKRALRIVMGRIEEAIARRGVCTIALAGGSTPKPLYEKLAEQSLPWAQLHIFWGDERYVPAEHPDS NQRMARLAWLDQVPIPEGNIHPMPTAAADPQQDAAAYDATLRNFFGDRPWPSFDIVLLGMGDDGHTASLFPQTAALTVGD RLITVGEKQGEPRLTFTVPLINAAQNILFLVAGENKQEALQKIFHSDADGFAYPSKLINPDHGVLWWLLDAAAGDRLAPD QAIYQTKSRPEP >Mature_251_residues TKYLEILDDKPELIKRALRIVMGRIEEAIARRGVCTIALAGGSTPKPLYEKLAEQSLPWAQLHIFWGDERYVPAEHPDSN QRMARLAWLDQVPIPEGNIHPMPTAAADPQQDAAAYDATLRNFFGDRPWPSFDIVLLGMGDDGHTASLFPQTAALTVGDR LITVGEKQGEPRLTFTVPLINAAQNILFLVAGENKQEALQKIFHSDADGFAYPSKLINPDHGVLWWLLDAAAGDRLAPDQ AIYQTKSRPEP
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=227, Percent_Identity=35.2422907488987, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI6912586, Length=230, Percent_Identity=31.304347826087, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI115533058, Length=245, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI115533060, Length=245, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6321957, Length=247, Percent_Identity=28.7449392712551, Blast_Score=96, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6321687, Length=248, Percent_Identity=29.0322580645161, Blast_Score=89, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6324362, Length=207, Percent_Identity=29.951690821256, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6319918, Length=216, Percent_Identity=30.0925925925926, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI24641119, Length=234, Percent_Identity=36.7521367521368, Blast_Score=115, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 27928; Mature: 27797
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYLEILDDKPELIKRALRIVMGRIEEAIARRGVCTIALAGGSTPKPLYEKLAEQSLPW CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCCE AQLHIFWGDERYVPAEHPDSNQRMARLAWLDQVPIPEGNIHPMPTAAADPQQDAAAYDAT EEEEEEECCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LRNFFGDRPWPSFDIVLLGMGDDGHTASLFPQTAALTVGDRLITVGEKQGEPRLTFTVPL HHHHCCCCCCCCEEEEEEEECCCCCEEECCCCHHEEEECCEEEEECCCCCCCEEEEEEEC INAAQNILFLVAGENKQEALQKIFHSDADGFAYPSKLINPDHGVLWWLLDAAAGDRLAPD HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCH QAIYQTKSRPEP HHHHHCCCCCCC >Mature Secondary Structure TKYLEILDDKPELIKRALRIVMGRIEEAIARRGVCTIALAGGSTPKPLYEKLAEQSLPW CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCCE AQLHIFWGDERYVPAEHPDSNQRMARLAWLDQVPIPEGNIHPMPTAAADPQQDAAAYDAT EEEEEEECCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LRNFFGDRPWPSFDIVLLGMGDDGHTASLFPQTAALTVGDRLITVGEKQGEPRLTFTVPL HHHHCCCCCCCCEEEEEEEECCCCCEEECCCCHHEEEECCEEEEECCCCCCCEEEEEEEC INAAQNILFLVAGENKQEALQKIFHSDADGFAYPSKLINPDHGVLWWLLDAAAGDRLAPD HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCH QAIYQTKSRPEP HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231; 9298645 [H]