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The map label for this gene is fraH [H]

Identifier: 170077549

GI number: 170077549

Start: 958334

End: 959137

Strand: Reverse

Name: fraH [H]

Synonym: SYNPCC7002_A0927

Alternate gene names: 170077549

Gene position: 959137-958334 (Counterclockwise)

Preceding gene: 170077550

Following gene: 170077548

Centisome position: 31.89

GC content: 53.73

Gene sequence:

>804_bases
ATGATTAGTTGTCCCAACTGTAACCACCAAAATCCTGACGGCGCCGTCCAATGCGAAGCCTGTTATACCCCTCTCCCCCA
AGCATCGGCTTGTCCCCAATGTGGCGCTAGCGTCCAAAGTAATGCCGCCTTCTGTGGTCAATGTGGCTTTAACCTGCAAC
AGGCCGCTCCCATGGCAGTAACAGAGGAGTTACCCAAAACTGTGGTTCCCAATGCCCCTAGTGCCAGCGCTCCCCCCACA
GCGCCCCCTGAGCCCACCCTGGATTTCCCAGAGATTCCCGAAGCAGATTTCCCTGATTTTCCTGATTTTTTCGAGGAAGA
AGAAGCCGCCGCCCCTGCCGTTGCCAAATCTCCAGAATTGCCTGATCCTTTCACATTTGATTTTGAAGAACCAACCCCTG
CCCCAGAGGTGCCGCCAACGCCTGCTCCTGCCCCAACCACTGTCCAGGGATCAATGCAGGCAACCCAAATTCAAGTGCAG
ACCGCCAGCTTGCTCCATGTGCAAACCCAGGTGGCCTTAGAAATTCCTGAACACCTCGATGTGATTCACATCGGCAAACC
GAATGAGACCGTCCCACCAGATATTGATGTTTCTGGTTTTCCGAGTTCTGAAGTGGTATCACGGGTACACGCTGACCTGC
GCCAAGAAGCGGGCCTCTACTATATCGAAGACACCGGTAGTTCCAATGGCACCTATATCAACCATGTGCCCCTCCCCGTC
GGTAATCGACATCGACTCCGGGCCGGCGATCGCATTGGTCTAGGCAAAGGCGATAAGGTGACGTTTATTTTCCAAATCAG
TTAA

Upstream 100 bases:

>100_bases
GCTGGCGATCGCCTCGCCCCCGATCAAGCAATCTATCAAACGAAATCTCGCCCAGAGCCTTAAAATAAAACCATTCTTTT
CCCTTTGACCACCCACTGTC

Downstream 100 bases:

>100_bases
GGGCGATTTTCCAATCCTGGCGTTTTGCCGTGGCCATTGACGCACCTTGGTTTAGAAAAACTTATCAATAGCCCCTAAAA
TTCCCTAAGAGGTTCTGATA

Product: FHA-domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MISCPNCNHQNPDGAVQCEACYTPLPQASACPQCGASVQSNAAFCGQCGFNLQQAAPMAVTEELPKTVVPNAPSASAPPT
APPEPTLDFPEIPEADFPDFPDFFEEEEAAAPAVAKSPELPDPFTFDFEEPTPAPEVPPTPAPAPTTVQGSMQATQIQVQ
TASLLHVQTQVALEIPEHLDVIHIGKPNETVPPDIDVSGFPSSEVVSRVHADLRQEAGLYYIEDTGSSNGTYINHVPLPV
GNRHRLRAGDRIGLGKGDKVTFIFQIS

Sequences:

>Translated_267_residues
MISCPNCNHQNPDGAVQCEACYTPLPQASACPQCGASVQSNAAFCGQCGFNLQQAAPMAVTEELPKTVVPNAPSASAPPT
APPEPTLDFPEIPEADFPDFPDFFEEEEAAAPAVAKSPELPDPFTFDFEEPTPAPEVPPTPAPAPTTVQGSMQATQIQVQ
TASLLHVQTQVALEIPEHLDVIHIGKPNETVPPDIDVSGFPSSEVVSRVHADLRQEAGLYYIEDTGSSNGTYINHVPLPV
GNRHRLRAGDRIGLGKGDKVTFIFQIS
>Mature_267_residues
MISCPNCNHQNPDGAVQCEACYTPLPQASACPQCGASVQSNAAFCGQCGFNLQQAAPMAVTEELPKTVVPNAPSASAPPT
APPEPTLDFPEIPEADFPDFPDFFEEEEAAAPAVAKSPELPDPFTFDFEEPTPAPEVPPTPAPAPTTVQGSMQATQIQVQ
TASLLHVQTQVALEIPEHLDVIHIGKPNETVPPDIDVSGFPSSEVVSRVHADLRQEAGLYYIEDTGSSNGTYINHVPLPV
GNRHRLRAGDRIGLGKGDKVTFIFQIS

Specific function: Putative heterocyst to vegetative cell connection [H]

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000253
- InterPro:   IPR008984 [H]

Pfam domain/function: PF00498 FHA [H]

EC number: NA

Molecular weight: Translated: 28401; Mature: 28401

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISCPNCNHQNPDGAVQCEACYTPLPQASACPQCGASVQSNAAFCGQCGFNLQQAAPMAV
CCCCCCCCCCCCCCCEEEHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHH
TEELPKTVVPNAPSASAPPTAPPEPTLDFPEIPEADFPDFPDFFEEEEAAAPAVAKSPEL
HHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCC
PDPFTFDFEEPTPAPEVPPTPAPAPTTVQGSMQATQIQVQTASLLHVQTQVALEIPEHLD
CCCEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEHHEEEEEEHHHEEECCCCCC
VIHIGKPNETVPPDIDVSGFPSSEVVSRVHADLRQEAGLYYIEDTGSSNGTYINHVPLPV
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCC
GNRHRLRAGDRIGLGKGDKVTFIFQIS
CCCCEECCCCEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MISCPNCNHQNPDGAVQCEACYTPLPQASACPQCGASVQSNAAFCGQCGFNLQQAAPMAV
CCCCCCCCCCCCCCCEEEHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHH
TEELPKTVVPNAPSASAPPTAPPEPTLDFPEIPEADFPDFPDFFEEEEAAAPAVAKSPEL
HHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCC
PDPFTFDFEEPTPAPEVPPTPAPAPTTVQGSMQATQIQVQTASLLHVQTQVALEIPEHLD
CCCEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEHHEEEEEEHHHEEECCCCCC
VIHIGKPNETVPPDIDVSGFPSSEVVSRVHADLRQEAGLYYIEDTGSSNGTYINHVPLPV
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCC
GNRHRLRAGDRIGLGKGDKVTFIFQIS
CCCCEECCCCEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]