| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is cscK [H]
Identifier: 170077508
GI number: 170077508
Start: 915800
End: 916675
Strand: Reverse
Name: cscK [H]
Synonym: SYNPCC7002_A0886
Alternate gene names: 170077508
Gene position: 916675-915800 (Counterclockwise)
Preceding gene: 170077509
Following gene: 170077507
Centisome position: 30.47
GC content: 43.84
Gene sequence:
>876_bases ATGGCAAAAAATATTGTAATTTTTGGTGAAGTGTTGTGGGATATTTTTCCCGACAATGATAGAAAGCTGGGGGGAGCTCC CTTCAATGTGGCCTGGCATCTAAAGGCGTTTGGGGCCAATCCTTTGTTAATTTCTCGGATTGGAACCGATGATCTTGGGG CAACAATTCAAACCAAAATGCAGGCTTGGCAGATGACCCTTGCTGGTCTTCAAATAGATAAAATTCACCCCACCGGAACC GTTAAAGTCACCCTGGAAAAGGGTCAACCCCAATATGAAATCACTGCCGACTGCGCCTATGATTTTATTAATAGTCAACA GTTTCCCATATTAGAAGATAAATTTTGGCTTTACCATGGCAGTCTTGCCCTTAGAAATGCTGTTTCTCAAGCCAGTTTTA GGGCACTACAGCAACGAGCAGACCAGATTTTTTTTGATGTGAATTTACGTCAACCCTGGTGGACATTAGAAACTATTGCT TCTGCCCTAGCTGCCAGTCAATATGTGAAATTAAATACCGAAGAATTAAGGTTATTAACACCTGAGTTTTCCTCAACTAA CCTTGCCATCGATCATTTATTGAATCAGAATTCGCTACGGCATATTATCCTAACAGCGGGAGAAGCCGGTGCGAGTCTCT ACACCCAAGGCGATCGCCAACAAATTTCTCCTCTCCAAAATACCACTGTGGTTGATACGGTTGGAGCTGGGGATGCTTTT TGTAGTATTTGCTTATTGGGGCTTATGAATGATTGGCCATCTGTCCTAACCCTAGAACGGGCGCAAGCCTTTGCCAGCGC TATTGTGGGGATTCGTGGTGCGGTAAGTGAAGATCCCCGATTTTATCAACCTTTTATTCAGGCCTGGCGGTTATAA
Upstream 100 bases:
>100_bases GTATGAATGGCAATTATAGTGCTGGAATTTTAGAGGGCATTTTTTACTACTTTCCTGAATATCAACAATGGCTTAATTCC ACCTAAGGAAACATTTGACT
Downstream 100 bases:
>100_bases TTGCTTGGAGTTAACCCAGTACTCATTTAATTTTCTGCAAACGGTTTTTTGCAAGCACCTTTGCTTTACTATAAATACGG TTCAATTTTCTAAACTTTAG
Product: PfkB family of carbohydrate kinases; fructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MAKNIVIFGEVLWDIFPDNDRKLGGAPFNVAWHLKAFGANPLLISRIGTDDLGATIQTKMQAWQMTLAGLQIDKIHPTGT VKVTLEKGQPQYEITADCAYDFINSQQFPILEDKFWLYHGSLALRNAVSQASFRALQQRADQIFFDVNLRQPWWTLETIA SALAASQYVKLNTEELRLLTPEFSSTNLAIDHLLNQNSLRHIILTAGEAGASLYTQGDRQQISPLQNTTVVDTVGAGDAF CSICLLGLMNDWPSVLTLERAQAFASAIVGIRGAVSEDPRFYQPFIQAWRL
Sequences:
>Translated_291_residues MAKNIVIFGEVLWDIFPDNDRKLGGAPFNVAWHLKAFGANPLLISRIGTDDLGATIQTKMQAWQMTLAGLQIDKIHPTGT VKVTLEKGQPQYEITADCAYDFINSQQFPILEDKFWLYHGSLALRNAVSQASFRALQQRADQIFFDVNLRQPWWTLETIA SALAASQYVKLNTEELRLLTPEFSSTNLAIDHLLNQNSLRHIILTAGEAGASLYTQGDRQQISPLQNTTVVDTVGAGDAF CSICLLGLMNDWPSVLTLERAQAFASAIVGIRGAVSEDPRFYQPFIQAWRL >Mature_290_residues AKNIVIFGEVLWDIFPDNDRKLGGAPFNVAWHLKAFGANPLLISRIGTDDLGATIQTKMQAWQMTLAGLQIDKIHPTGTV KVTLEKGQPQYEITADCAYDFINSQQFPILEDKFWLYHGSLALRNAVSQASFRALQQRADQIFFDVNLRQPWWTLETIAS ALAASQYVKLNTEELRLLTPEFSSTNLAIDHLLNQNSLRHIILTAGEAGASLYTQGDRQQISPLQNTTVVDTVGAGDAFC SICLLGLMNDWPSVLTLERAQAFASAIVGIRGAVSEDPRFYQPFIQAWRL
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32399; Mature: 32268
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNIVIFGEVLWDIFPDNDRKLGGAPFNVAWHLKAFGANPLLISRIGTDDLGATIQTKM CCCCEEEEEEHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHHH QAWQMTLAGLQIDKIHPTGTVKVTLEKGQPQYEITADCAYDFINSQQFPILEDKFWLYHG HHHHHHHHCEEEEEECCCCEEEEEEECCCCCEEEEHHHHHHHHCCCCCCEECCCEEEEEC SLALRNAVSQASFRALQQRADQIFFDVNLRQPWWTLETIASALAASQYVKLNTEELRLLT CHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHEEECHHHEEEEC PEFSSTNLAIDHLLNQNSLRHIILTAGEAGASLYTQGDRQQISPLQNTTVVDTVGAGDAF CCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEECCCHHHCCCCCCCEEEEECCCCHHH CSICLLGLMNDWPSVLTLERAQAFASAIVGIRGAVSEDPRFYQPFIQAWRL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure AKNIVIFGEVLWDIFPDNDRKLGGAPFNVAWHLKAFGANPLLISRIGTDDLGATIQTKM CCCEEEEEEHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHHH QAWQMTLAGLQIDKIHPTGTVKVTLEKGQPQYEITADCAYDFINSQQFPILEDKFWLYHG HHHHHHHHCEEEEEECCCCEEEEEEECCCCCEEEEHHHHHHHHCCCCCCEECCCEEEEEC SLALRNAVSQASFRALQQRADQIFFDVNLRQPWWTLETIASALAASQYVKLNTEELRLLT CHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHEEECHHHEEEEC PEFSSTNLAIDHLLNQNSLRHIILTAGEAGASLYTQGDRQQISPLQNTTVVDTVGAGDAF CCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEECCCHHHCCCCCCCEEEEECCCCHHH CSICLLGLMNDWPSVLTLERAQAFASAIVGIRGAVSEDPRFYQPFIQAWRL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA