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The map label for this gene is ams [H]

Identifier: 170077507

GI number: 170077507

Start: 913704

End: 915689

Strand: Reverse

Name: ams [H]

Synonym: SYNPCC7002_A0885

Alternate gene names: 170077507

Gene position: 915689-913704 (Counterclockwise)

Preceding gene: 170077508

Following gene: 170077503

Centisome position: 30.44

GC content: 41.99

Gene sequence:

>1986_bases
ATGTACGAACAGTTTTCTCACTCGATTTTAAATGAGATTTTAGATCAATTAAGGCCCGAACTCAAAGAACAAGAATTAAG
TCATTTTTATACCCGTTTAGGAGCAAACTTCTATAGCCTTTTCTCTCTCTTTTATAAACTCTATGGTCGCCGCTCAGACT
TTAAGGCGCAACTGCTGAGACTGGTCGAAGTGATGGCCTATCAATACATTGGGCGATCGCCAGAATTTAAACAGACTGAT
TTAGTACGGGAAAAAAACTTTAACTGGTTTCTTGAATCCCAATGGGTCGGTATGACTTTGTATGCCGATGGCTTTGCCGA
CGATCTCCAAGACCTAGGCGATCGCGTTGCCTATTTCAGCGAATTAGGGGTTAATTTCATCCACATTATGCCGATTTTAG
AATGTCCCCGCCATGCCAGTGACGGCGGCTATGCGATTAGTAATTATCGACAAATTAACCCCAAAATTGGCACCCTCCAG
GATCTCCAACACCTCGTAGAAATCTTTCGCCAAAAAGAAATTTTGTTGGCCCTCGATATTGTAATTAATCACACTTCAAA
CGAACACGAATGGGCACAAAAAGCACGTAAAGGGGACAAAAAATATCAAAAATATTATTATATGTTCGACACGCGGGATA
TTCCCGACATGTTTGAAAAAAATCTTCCAGAAATTTTTCCAGAAACGGCTCCGGGTAATTTTACCTGGGATGAAGAATTA
CAAAAATGGGTGATGACTGTTTTTAATAACTACCAATGGGATCTTAATTATCAAAACCCGGCGGTGCTCATTGAAATGGT
CGATATTATTCTTTTTTGGGCCAACCAAGGCGTTGATGTGCTGCGGCTCGATGCGGTCGCTTTTCTATGGAAAAAGATCG
GCAGCCAGAGTCAAAACGAAAAAGAAGCCCACATGATTTTGCAGATCTTCAAAGACTGCTGCCAAATTACCGCCCCAGGG
GTCATTTTCATTGCCGAGGCGATCGTTGCCCCCGTAGAAATTGTGCGGTATTTCGGGGAAGATGCGATCAACGCCAAGGA
ATGTGAAATTGCCTACAATGCCACGCTCATGGCCCTCCTGTGGGATGCCGCCGCCACCAAGAATGCCAAACTTTTAATCC
AAGGACTCAAAAATATTCCGGCAAAGCTGGACCGCGCCACCTGGCTCAATTATATCCGCTGCCATGATGACATTGGCCTG
GGGTTTACCGATGCAGACATCGCTCAGGCAGGCTATGACCCAAAATCCCACCGACGGTTTCTCATTGACTATTTTTGTGG
CCAATTTGAAGGCACCGATGCGAGGGGTTTACTGTTTGGTCAAAATTCTAAAAATGACGATGCCCGTATTTCAGGTACTC
TGACGTCTTTAATGGGCTTAGAAACAGCTATTGAGGCCAACGACCAGCAAAAAATAGCGATCATTATCAAACATATTTTA
TTGCTCTACAGTATTATTTTTTCCTTTGGGGGCATTCCACTAATCTATTATGGCGATGAAATTGGCACTTTAAATGATTA
TTCCTACATGGGAAATTTGAGTAAAGCCAATGATACTCGCTGGGCTCATCGGCCTAAAATCAACTGGAAAAAAGCAGAAC
TACGACATATTGAAGGCACCATTGAACACCGTATTTTTTCTGCTTTACAACACATGATTGTGGTACGTAAAGCAATTCCT
GCTTTTGCTGATTTTAATAATCGTCAACTGTTATCCATTGATAATCCGCACCTATTTGGGTTTGTGCGCATTAGTCCCAA
TAAACGGGATCATATTTTAGTCATTGGAAATTTTTCACCGGACTATCAAAATTTAGATCTTAGTCACTTAGCCTGTCATC
CTTTTGATTGCCATGACCAGGATTTATTGATTGATTTATACAGTCAAAATGCACCGGAAATTTTTGAAAAACAACTTGTG
CTGGCACCGTTCCAGTTTTATTGGTTGAGTAAAATGCAGCCGAGTCTGACCACAACTTTGCTATAG

Upstream 100 bases:

>100_bases
TTAACCCAGTACTCATTTAATTTTCTGCAAACGGTTTTTTGCAAGCACCTTTGCTTTACTATAAATACGGTTCAATTTTC
TAAACTTTAGGTTTCGGGCT

Downstream 100 bases:

>100_bases
GTTATTGCGCCAATGCTTAATTGAGAGAACCATTGGCCTTACTGCTACCGATGAGATAAAGCAACGCCATCCGTACAGCG
ACGCCATTGGTCACCTGCTC

Product: alpha amylase subunit A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MYEQFSHSILNEILDQLRPELKEQELSHFYTRLGANFYSLFSLFYKLYGRRSDFKAQLLRLVEVMAYQYIGRSPEFKQTD
LVREKNFNWFLESQWVGMTLYADGFADDLQDLGDRVAYFSELGVNFIHIMPILECPRHASDGGYAISNYRQINPKIGTLQ
DLQHLVEIFRQKEILLALDIVINHTSNEHEWAQKARKGDKKYQKYYYMFDTRDIPDMFEKNLPEIFPETAPGNFTWDEEL
QKWVMTVFNNYQWDLNYQNPAVLIEMVDIILFWANQGVDVLRLDAVAFLWKKIGSQSQNEKEAHMILQIFKDCCQITAPG
VIFIAEAIVAPVEIVRYFGEDAINAKECEIAYNATLMALLWDAAATKNAKLLIQGLKNIPAKLDRATWLNYIRCHDDIGL
GFTDADIAQAGYDPKSHRRFLIDYFCGQFEGTDARGLLFGQNSKNDDARISGTLTSLMGLETAIEANDQQKIAIIIKHIL
LLYSIIFSFGGIPLIYYGDEIGTLNDYSYMGNLSKANDTRWAHRPKINWKKAELRHIEGTIEHRIFSALQHMIVVRKAIP
AFADFNNRQLLSIDNPHLFGFVRISPNKRDHILVIGNFSPDYQNLDLSHLACHPFDCHDQDLLIDLYSQNAPEIFEKQLV
LAPFQFYWLSKMQPSLTTTLL

Sequences:

>Translated_661_residues
MYEQFSHSILNEILDQLRPELKEQELSHFYTRLGANFYSLFSLFYKLYGRRSDFKAQLLRLVEVMAYQYIGRSPEFKQTD
LVREKNFNWFLESQWVGMTLYADGFADDLQDLGDRVAYFSELGVNFIHIMPILECPRHASDGGYAISNYRQINPKIGTLQ
DLQHLVEIFRQKEILLALDIVINHTSNEHEWAQKARKGDKKYQKYYYMFDTRDIPDMFEKNLPEIFPETAPGNFTWDEEL
QKWVMTVFNNYQWDLNYQNPAVLIEMVDIILFWANQGVDVLRLDAVAFLWKKIGSQSQNEKEAHMILQIFKDCCQITAPG
VIFIAEAIVAPVEIVRYFGEDAINAKECEIAYNATLMALLWDAAATKNAKLLIQGLKNIPAKLDRATWLNYIRCHDDIGL
GFTDADIAQAGYDPKSHRRFLIDYFCGQFEGTDARGLLFGQNSKNDDARISGTLTSLMGLETAIEANDQQKIAIIIKHIL
LLYSIIFSFGGIPLIYYGDEIGTLNDYSYMGNLSKANDTRWAHRPKINWKKAELRHIEGTIEHRIFSALQHMIVVRKAIP
AFADFNNRQLLSIDNPHLFGFVRISPNKRDHILVIGNFSPDYQNLDLSHLACHPFDCHDQDLLIDLYSQNAPEIFEKQLV
LAPFQFYWLSKMQPSLTTTLL
>Mature_661_residues
MYEQFSHSILNEILDQLRPELKEQELSHFYTRLGANFYSLFSLFYKLYGRRSDFKAQLLRLVEVMAYQYIGRSPEFKQTD
LVREKNFNWFLESQWVGMTLYADGFADDLQDLGDRVAYFSELGVNFIHIMPILECPRHASDGGYAISNYRQINPKIGTLQ
DLQHLVEIFRQKEILLALDIVINHTSNEHEWAQKARKGDKKYQKYYYMFDTRDIPDMFEKNLPEIFPETAPGNFTWDEEL
QKWVMTVFNNYQWDLNYQNPAVLIEMVDIILFWANQGVDVLRLDAVAFLWKKIGSQSQNEKEAHMILQIFKDCCQITAPG
VIFIAEAIVAPVEIVRYFGEDAINAKECEIAYNATLMALLWDAAATKNAKLLIQGLKNIPAKLDRATWLNYIRCHDDIGL
GFTDADIAQAGYDPKSHRRFLIDYFCGQFEGTDARGLLFGQNSKNDDARISGTLTSLMGLETAIEANDQQKIAIIIKHIL
LLYSIIFSFGGIPLIYYGDEIGTLNDYSYMGNLSKANDTRWAHRPKINWKKAELRHIEGTIEHRIFSALQHMIVVRKAIP
AFADFNNRQLLSIDNPHLFGFVRISPNKRDHILVIGNFSPDYQNLDLSHLACHPFDCHDQDLLIDLYSQNAPEIFEKQLV
LAPFQFYWLSKMQPSLTTTLL

Specific function: Catalyzes the synthesis of alpha-glucan from sucrose. Catalyzes, in addition, sucrose hydrolysis, maltose and maltotriose synthesis by successive transfers of the glucosyl moiety of sucrose onto the released glucose, and finally turanose and trehalulose s

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=415, Percent_Identity=22.6506024096386, Blast_Score=99, Evalue=2e-20,
Organism=Escherichia coli, GI87081873, Length=567, Percent_Identity=25.3968253968254, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1790687, Length=184, Percent_Identity=34.7826086956522, Blast_Score=109, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6321726, Length=195, Percent_Identity=28.7179487179487, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6321731, Length=195, Percent_Identity=28.7179487179487, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6319776, Length=195, Percent_Identity=28.7179487179487, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322241, Length=195, Percent_Identity=29.2307692307692, Blast_Score=88, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322021, Length=195, Percent_Identity=29.2307692307692, Blast_Score=88, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6324416, Length=195, Percent_Identity=29.2307692307692, Blast_Score=88, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322245, Length=194, Percent_Identity=28.3505154639175, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24583745, Length=197, Percent_Identity=35.0253807106599, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24583747, Length=197, Percent_Identity=34.010152284264, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583749, Length=197, Percent_Identity=34.010152284264, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI221330053, Length=191, Percent_Identity=33.5078534031414, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI45549022, Length=191, Percent_Identity=32.9842931937173, Blast_Score=110, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24586587, Length=191, Percent_Identity=32.4607329842932, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24586599, Length=193, Percent_Identity=32.6424870466321, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24586593, Length=201, Percent_Identity=31.8407960199005, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24586591, Length=182, Percent_Identity=30.7692307692308, Blast_Score=103, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24586597, Length=191, Percent_Identity=31.9371727748691, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24586589, Length=191, Percent_Identity=29.3193717277487, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI281360393, Length=163, Percent_Identity=32.5153374233129, Blast_Score=89, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =2.4.1.4 [H]

Molecular weight: Translated: 76500; Mature: 76500

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEQFSHSILNEILDQLRPELKEQELSHFYTRLGANFYSLFSLFYKLYGRRSDFKAQLLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH
LVEVMAYQYIGRSPEFKQTDLVREKNFNWFLESQWVGMTLYADGFADDLQDLGDRVAYFS
HHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEECCEEEEEEEECCCHHHHHHHHHHHHHHH
ELGVNFIHIMPILECPRHASDGGYAISNYRQINPKIGTLQDLQHLVEIFRQKEILLALDI
HHCCCCEEEHHHHHCCCCCCCCCEEECCCEECCCCCCCHHHHHHHHHHHHCCHHEEEEEE
VINHTSNEHEWAQKARKGDKKYQKYYYMFDTRDIPDMFEKNLPEIFPETAPGNFTWDEEL
HEECCCCHHHHHHHHHCCCHHHHEEEEEEECCCCHHHHHCCCHHHCCCCCCCCCCHHHHH
QKWVMTVFNNYQWDLNYQNPAVLIEMVDIILFWANQGVDVLRLDAVAFLWKKIGSQSQNE
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCH
KEAHMILQIFKDCCQITAPGVIFIAEAIVAPVEIVRYFGEDAINAKECEIAYNATLMALL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHH
WDAAATKNAKLLIQGLKNIPAKLDRATWLNYIRCHDDIGLGFTDADIAQAGYDPKSHRRF
HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCCCCHHHHHH
LIDYFCGQFEGTDARGLLFGQNSKNDDARISGTLTSLMGLETAIEANDQQKIAIIIKHIL
HHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LLYSIIFSFGGIPLIYYGDEIGTLNDYSYMGNLSKANDTRWAHRPKINWKKAELRHIEGT
HHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
IEHRIFSALQHMIVVRKAIPAFADFNNRQLLSIDNPHLFGFVRISPNKRDHILVIGNFSP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCC
DYQNLDLSHLACHPFDCHDQDLLIDLYSQNAPEIFEKQLVLAPFQFYWLSKMQPSLTTTL
CCCCCCHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHC
L
C
>Mature Secondary Structure
MYEQFSHSILNEILDQLRPELKEQELSHFYTRLGANFYSLFSLFYKLYGRRSDFKAQLLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH
LVEVMAYQYIGRSPEFKQTDLVREKNFNWFLESQWVGMTLYADGFADDLQDLGDRVAYFS
HHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEECCEEEEEEEECCCHHHHHHHHHHHHHHH
ELGVNFIHIMPILECPRHASDGGYAISNYRQINPKIGTLQDLQHLVEIFRQKEILLALDI
HHCCCCEEEHHHHHCCCCCCCCCEEECCCEECCCCCCCHHHHHHHHHHHHCCHHEEEEEE
VINHTSNEHEWAQKARKGDKKYQKYYYMFDTRDIPDMFEKNLPEIFPETAPGNFTWDEEL
HEECCCCHHHHHHHHHCCCHHHHEEEEEEECCCCHHHHHCCCHHHCCCCCCCCCCHHHHH
QKWVMTVFNNYQWDLNYQNPAVLIEMVDIILFWANQGVDVLRLDAVAFLWKKIGSQSQNE
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCH
KEAHMILQIFKDCCQITAPGVIFIAEAIVAPVEIVRYFGEDAINAKECEIAYNATLMALL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHH
WDAAATKNAKLLIQGLKNIPAKLDRATWLNYIRCHDDIGLGFTDADIAQAGYDPKSHRRF
HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCCCCHHHHHH
LIDYFCGQFEGTDARGLLFGQNSKNDDARISGTLTSLMGLETAIEANDQQKIAIIIKHIL
HHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LLYSIIFSFGGIPLIYYGDEIGTLNDYSYMGNLSKANDTRWAHRPKINWKKAELRHIEGT
HHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
IEHRIFSALQHMIVVRKAIPAFADFNNRQLLSIDNPHLFGFVRISPNKRDHILVIGNFSP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCC
DYQNLDLSHLACHPFDCHDQDLLIDLYSQNAPEIFEKQLVLAPFQFYWLSKMQPSLTTTL
CCCCCCHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12517860 [H]