| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077509
Identifier: 170077509
GI number: 170077509
Start: 916690
End: 917523
Strand: Reverse
Name: 170077509
Synonym: SYNPCC7002_A0887
Alternate gene names: NA
Gene position: 917523-916690 (Counterclockwise)
Preceding gene: 170077510
Following gene: 170077508
Centisome position: 30.5
GC content: 42.93
Gene sequence:
>834_bases ATGACTGATCGCTTGCTGTTATGTACTGATCTAGATCGCACTTTGATTCCCAATGGTGCCGCCCCAGAATCTCCCCAGGC AAGGGCTTATTTCCGTCAATTTGTTGCCCAGCCCCAAGTAACTTTAGCCTATGTCACGGGACGCCATTTAGCTTTAATTG ATCAGGCGATTTTAGACTATCAACTGCCTCACCCCCAATTTGCGATCGCCGATGTGGGTAGCAGTATTTATACTTGGCAA AATTCCCAATGGCACCGCTGGCAAACCTGGGATGATCACCTTGCGACGGACTGGCCAAAACAGGGGGCGATCGCCATCTA TCACCGCCTTGCCAATCACCCGGCTCTCCAACTCCAGGAATCAGCCAAACAAAGCCACTATAAACTGAGTTATTACGTCG ATCTTCAAGCAGATACTCAACAATTATTAATTGAAATCAAAACACTTTTAGAAAAACATGATTTTTCCACCCATTTAATC TGGAGCGTTGATGAAGAAAAGCAAATAGGCTTATTAGATATCTTGCCTTCCCAAGCGAATAAATATCAAGCTATTTCTTT TTTGATGGCTACCCAAAAATTTTCTTTGGCACAAACGATTTTTGCTGGGGATAGCGGCAATGATGAGGCAGTTTTAAGCA GTCCCATTCCTGCGGTGCTTGTGGCCAATGCCCACCAAGAATTAAGAAAAAAACTTCAAGATGCCCATGATCAAGCCTCA CTTTATTTTGCTCAGGGTAATTGTTTAGGTATGAATGGCAATTATAGTGCTGGAATTTTAGAGGGCATTTTTTACTACTT TCCTGAATATCAACAATGGCTTAATTCCACCTAA
Upstream 100 bases:
>100_bases CAACCAATTTATTTTTCTGAAAAAGAATTTGCGGCTGGCATTTTAGATGGTTTAGCCCACTATAATTTCTTAGAATTATG TCGTGCGACGGGACAAAATC
Downstream 100 bases:
>100_bases GGAAACATTTGACTATGGCAAAAAATATTGTAATTTTTGGTGAAGTGTTGTGGGATATTTTTCCCGACAATGATAGAAAG CTGGGGGGAGCTCCCTTCAA
Product: HAD family hydrolase
Products: D-glucose; cholesterol
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTDRLLLCTDLDRTLIPNGAAPESPQARAYFRQFVAQPQVTLAYVTGRHLALIDQAILDYQLPHPQFAIADVGSSIYTWQ NSQWHRWQTWDDHLATDWPKQGAIAIYHRLANHPALQLQESAKQSHYKLSYYVDLQADTQQLLIEIKTLLEKHDFSTHLI WSVDEEKQIGLLDILPSQANKYQAISFLMATQKFSLAQTIFAGDSGNDEAVLSSPIPAVLVANAHQELRKKLQDAHDQAS LYFAQGNCLGMNGNYSAGILEGIFYYFPEYQQWLNST
Sequences:
>Translated_277_residues MTDRLLLCTDLDRTLIPNGAAPESPQARAYFRQFVAQPQVTLAYVTGRHLALIDQAILDYQLPHPQFAIADVGSSIYTWQ NSQWHRWQTWDDHLATDWPKQGAIAIYHRLANHPALQLQESAKQSHYKLSYYVDLQADTQQLLIEIKTLLEKHDFSTHLI WSVDEEKQIGLLDILPSQANKYQAISFLMATQKFSLAQTIFAGDSGNDEAVLSSPIPAVLVANAHQELRKKLQDAHDQAS LYFAQGNCLGMNGNYSAGILEGIFYYFPEYQQWLNST >Mature_276_residues TDRLLLCTDLDRTLIPNGAAPESPQARAYFRQFVAQPQVTLAYVTGRHLALIDQAILDYQLPHPQFAIADVGSSIYTWQN SQWHRWQTWDDHLATDWPKQGAIAIYHRLANHPALQLQESAKQSHYKLSYYVDLQADTQQLLIEIKTLLEKHDFSTHLIW SVDEEKQIGLLDILPSQANKYQAISFLMATQKFSLAQTIFAGDSGNDEAVLSSPIPAVLVANAHQELRKKLQDAHDQASL YFAQGNCLGMNGNYSAGILEGIFYYFPEYQQWLNST
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the UPF0745 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR006380 - InterPro: IPR007840 - ProDom: PD030374 [H]
Pfam domain/function: PF05116 S6PP; PF05166 YcgL [H]
EC number: 3.2.1.1
Molecular weight: Translated: 31438; Mature: 31306
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRLLLCTDLDRTLIPNGAAPESPQARAYFRQFVAQPQVTLAYVTGRHLALIDQAILDY CCCCEEEEECCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHC QLPHPQFAIADVGSSIYTWQNSQWHRWQTWDDHLATDWPKQGAIAIYHRLANHPALQLQE CCCCCCEEHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHH SAKQSHYKLSYYVDLQADTQQLLIEIKTLLEKHDFSTHLIWSVDEEKQIGLLDILPSQAN HHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCCC KYQAISFLMATQKFSLAQTIFAGDSGNDEAVLSSPIPAVLVANAHQELRKKLQDAHDQAS HHHHHHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCEEEEECCHHHHHHHHHCCCCCCE LYFAQGNCLGMNGNYSAGILEGIFYYFPEYQQWLNST EEEECCCEEECCCCCCHHHHHHHHHHCHHHHHHHCCC >Mature Secondary Structure TDRLLLCTDLDRTLIPNGAAPESPQARAYFRQFVAQPQVTLAYVTGRHLALIDQAILDY CCCEEEEECCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHC QLPHPQFAIADVGSSIYTWQNSQWHRWQTWDDHLATDWPKQGAIAIYHRLANHPALQLQE CCCCCCEEHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHH SAKQSHYKLSYYVDLQADTQQLLIEIKTLLEKHDFSTHLIWSVDEEKQIGLLDILPSQAN HHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCCC KYQAISFLMATQKFSLAQTIFAGDSGNDEAVLSSPIPAVLVANAHQELRKKLQDAHDQAS HHHHHHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCEEEEECCHHHHHHHHHCCCCCCE LYFAQGNCLGMNGNYSAGILEGIFYYFPEYQQWLNST EEEECCCEEECCCCCCHHHHHHHHHHCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; cholesteryl-beta-D-glucoside
Specific reaction: H2O + cholesteryl-beta-D-glucoside = D-glucose + cholesterol
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA