Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
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Accession | NC_010475 |
Length | 3,008,047 |
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The map label for this gene is 170077452
Identifier: 170077452
GI number: 170077452
Start: 858218
End: 858433
Strand: Reverse
Name: 170077452
Synonym: SYNPCC7002_A0830
Alternate gene names: NA
Gene position: 858433-858218 (Counterclockwise)
Preceding gene: 170077453
Following gene: 170077451
Centisome position: 28.54
GC content: 32.87
Gene sequence:
>216_bases ATGAAGATTCAATATTTTCAAGATACAGATACTCTATATTTAGAATTCAATCAAAATCCGATTGTAGAAACGAAAGATAT TAACGAAAATACCCTCGTCGATTTAGATCAAGATGGCAAAGTCTGCGCAATCACTATCGAGCATGCTCAAAACCTAACAA ATTTAAATACTTTTTCTTTTGAAACTATCGCCCCAGATATAATTCTGGCCTCTTGA
Upstream 100 bases:
>100_bases GGGCAAGAATTCATGAAATGGATAACCGGGCATTGAGGGTTGTTTTGCTTCAGGATGGAGAAACGATTCACAATGCCTTT TTTGATCGGAGTTTTAAAAA
Downstream 100 bases:
>100_bases CAAGTTATTGTTTTTATATTGATCGCAGTATTTTCAGATGTCTATTGACAAAAATCTTTTTAGTAAATGTGTTAAATTCG ATGATCGTAGACGGAAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MKIQYFQDTDTLYLEFNQNPIVETKDINENTLVDLDQDGKVCAITIEHAQNLTNLNTFSFETIAPDIILAS
Sequences:
>Translated_71_residues MKIQYFQDTDTLYLEFNQNPIVETKDINENTLVDLDQDGKVCAITIEHAQNLTNLNTFSFETIAPDIILAS >Mature_71_residues MKIQYFQDTDTLYLEFNQNPIVETKDINENTLVDLDQDGKVCAITIEHAQNLTNLNTFSFETIAPDIILAS
Specific function: Unknown
COG id: COG5428
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8093; Mature: 8093
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQYFQDTDTLYLEFNQNPIVETKDINENTLVDLDQDGKVCAITIEHAQNLTNLNTFSF CEEEEEECCCEEEEEECCCCCEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEE ETIAPDIILAS CCCCCEEEEEC >Mature Secondary Structure MKIQYFQDTDTLYLEFNQNPIVETKDINENTLVDLDQDGKVCAITIEHAQNLTNLNTFSF CEEEEEECCCEEEEEECCCCCEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEE ETIAPDIILAS CCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA