Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
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Accession | NC_010475 |
Length | 3,008,047 |
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The map label for this gene is 170077451
Identifier: 170077451
GI number: 170077451
Start: 856966
End: 858180
Strand: Reverse
Name: 170077451
Synonym: SYNPCC7002_A0829
Alternate gene names: NA
Gene position: 858180-856966 (Counterclockwise)
Preceding gene: 170077452
Following gene: 170077450
Centisome position: 28.53
GC content: 31.93
Gene sequence:
>1215_bases ATGTCTATTGACAAAAATCTTTTTAGTAAATGTGTTAAATTCGATGATCGTAGACGGAAATACTGCCTTGACTTTTCATC ATTAATTAATAAATTAATACTATTCGACAAAGTTATTTTAGATTCTCCTAATTTTTATGAGGTCAATGGTCTCGTAGAAG AATTGGGTTTTGAACAAACTTTATCTTTGCTCTCATCTGGGATCTTGAAGTTTTCGTGTGATCTTCGTATAACTTCTCAG GTTGCACAAAATCAACACATTATTTCAAGTAAGAAAACTTATCCACAGGGATTTTATCAAATTCAATATGCTTTTGCTGC TGAACAAAAAATATGGATTAGTGACAATCTTAAGAATATCAGGCACTCTGAACTCAGCAAAAGTAAAGTAAAGAAGCTTA AGCTGACAGTAGTTGAATCCCTTGACAAAAACTATTTAAAAGACAATATCGATCTACTAAAACAGACAGATGAGGACTTG CAATTTAACCGTGGCGTTAAAGTTGCGACCTTAAATGTTTTAAAAAAAGAATATAGCATGGAATTAGATTCAGAAATTTT TGATATTAAACTACATCAAGTAGACAAATCTATTTTCAAAGTCGAGACTAACTTGAGTGATCTGTGCTCTCTAAACGAAA CAGAAATATATAAAATTGTTGAAAAGGCGGTGTTGGGAATCGGGAATTTCAATCTGCGTATGGCAGAAATGAACATGCAC AATGCTTTATCTTGTTTTATGCGAGACGAAATAGATCTGTTGAAAAATAGGTTGGAGTATATTTTCTTTAAAAAGGATGA CCCCAATAAGCTCGAAGCAAATTTCGATTCTATTTTAAACCTAAAAAGACACCCTAAAATAATTGCAGAATCCAATCCCA AGATTGATATTAATAAATTAATGAAGGTTAGACAAAGTGACGAACTTAAACTTTTTCGAAATTGGTTAAAAGATATTGAA GAAGTTAAAGAGAAAGAGATCCTTCAAGAATTGAATAGTATTCGGGCAAAACTTGGAGTCAACTTAAATACTAATACAGG CAAATTTTTACGACTAGGTATGTCTACCCTTGCCGGATTAATTCCTAATATTGGAATGCAGGCAAGTATACCTTTAAGTG TACTGGATAATTTTCTCTTAGATAAAGTTTTGCCAGCTTCTCCTATAGTCACTTTTGTTGATGATCTATACCCATCTATA TTTAAACAACATTGA
Upstream 100 bases:
>100_bases CTAACAAATTTAAATACTTTTTCTTTTGAAACTATCGCCCCAGATATAATTCTGGCCTCTTGACAAGTTATTGTTTTTAT ATTGATCGCAGTATTTTCAG
Downstream 100 bases:
>100_bases TCACAACATAGCCGCTAATTTTTTCAAGGTTTTTTCCTCGCTTATCTGGCTCGATTGTAATAATGTTTTGGTAACTCATG ACTGCAAGCCTGCCAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSIDKNLFSKCVKFDDRRRKYCLDFSSLINKLILFDKVILDSPNFYEVNGLVEELGFEQTLSLLSSGILKFSCDLRITSQ VAQNQHIISSKKTYPQGFYQIQYAFAAEQKIWISDNLKNIRHSELSKSKVKKLKLTVVESLDKNYLKDNIDLLKQTDEDL QFNRGVKVATLNVLKKEYSMELDSEIFDIKLHQVDKSIFKVETNLSDLCSLNETEIYKIVEKAVLGIGNFNLRMAEMNMH NALSCFMRDEIDLLKNRLEYIFFKKDDPNKLEANFDSILNLKRHPKIIAESNPKIDINKLMKVRQSDELKLFRNWLKDIE EVKEKEILQELNSIRAKLGVNLNTNTGKFLRLGMSTLAGLIPNIGMQASIPLSVLDNFLLDKVLPASPIVTFVDDLYPSI FKQH
Sequences:
>Translated_404_residues MSIDKNLFSKCVKFDDRRRKYCLDFSSLINKLILFDKVILDSPNFYEVNGLVEELGFEQTLSLLSSGILKFSCDLRITSQ VAQNQHIISSKKTYPQGFYQIQYAFAAEQKIWISDNLKNIRHSELSKSKVKKLKLTVVESLDKNYLKDNIDLLKQTDEDL QFNRGVKVATLNVLKKEYSMELDSEIFDIKLHQVDKSIFKVETNLSDLCSLNETEIYKIVEKAVLGIGNFNLRMAEMNMH NALSCFMRDEIDLLKNRLEYIFFKKDDPNKLEANFDSILNLKRHPKIIAESNPKIDINKLMKVRQSDELKLFRNWLKDIE EVKEKEILQELNSIRAKLGVNLNTNTGKFLRLGMSTLAGLIPNIGMQASIPLSVLDNFLLDKVLPASPIVTFVDDLYPSI FKQH >Mature_403_residues SIDKNLFSKCVKFDDRRRKYCLDFSSLINKLILFDKVILDSPNFYEVNGLVEELGFEQTLSLLSSGILKFSCDLRITSQV AQNQHIISSKKTYPQGFYQIQYAFAAEQKIWISDNLKNIRHSELSKSKVKKLKLTVVESLDKNYLKDNIDLLKQTDEDLQ FNRGVKVATLNVLKKEYSMELDSEIFDIKLHQVDKSIFKVETNLSDLCSLNETEIYKIVEKAVLGIGNFNLRMAEMNMHN ALSCFMRDEIDLLKNRLEYIFFKKDDPNKLEANFDSILNLKRHPKIIAESNPKIDINKLMKVRQSDELKLFRNWLKDIEE VKEKEILQELNSIRAKLGVNLNTNTGKFLRLGMSTLAGLIPNIGMQASIPLSVLDNFLLDKVLPASPIVTFVDDLYPSIF KQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46662; Mature: 46531
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDKNLFSKCVKFDDRRRKYCLDFSSLINKLILFDKVILDSPNFYEVNGLVEELGFEQT CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCHHHH LSLLSSGILKFSCDLRITSQVAQNQHIISSKKTYPQGFYQIQYAFAAEQKIWISDNLKNI HHHHHCCCEEEEECEEEHHHHHCCCHHHCCCCCCCCCCEEEEEEECCCCEEEECCCHHHH RHSELSKSKVKKLKLTVVESLDKNYLKDNIDLLKQTDEDLQFNRGVKVATLNVLKKEYSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEHHHHHHHHHHCC ELDSEIFDIKLHQVDKSIFKVETNLSDLCSLNETEIYKIVEKAVLGIGNFNLRMAEMNMH CCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCHH NALSCFMRDEIDLLKNRLEYIFFKKDDPNKLEANFDSILNLKRHPKIIAESNPKIDINKL HHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCHHHHHHHHHCCCEEECCCCCEEHHHH MKVRQSDELKLFRNWLKDIEEVKEKEILQELNSIRAKLGVNLNTNTGKFLRLGMSTLAGL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IPNIGMQASIPLSVLDNFLLDKVLPASPIVTFVDDLYPSIFKQH HCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIDKNLFSKCVKFDDRRRKYCLDFSSLINKLILFDKVILDSPNFYEVNGLVEELGFEQT CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCHHHH LSLLSSGILKFSCDLRITSQVAQNQHIISSKKTYPQGFYQIQYAFAAEQKIWISDNLKNI HHHHHCCCEEEEECEEEHHHHHCCCHHHCCCCCCCCCCEEEEEEECCCCEEEECCCHHHH RHSELSKSKVKKLKLTVVESLDKNYLKDNIDLLKQTDEDLQFNRGVKVATLNVLKKEYSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEHHHHHHHHHHCC ELDSEIFDIKLHQVDKSIFKVETNLSDLCSLNETEIYKIVEKAVLGIGNFNLRMAEMNMH CCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCHH NALSCFMRDEIDLLKNRLEYIFFKKDDPNKLEANFDSILNLKRHPKIIAESNPKIDINKL HHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCHHHHHHHHHCCCEEECCCCCEEHHHH MKVRQSDELKLFRNWLKDIEEVKEKEILQELNSIRAKLGVNLNTNTGKFLRLGMSTLAGL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IPNIGMQASIPLSVLDNFLLDKVLPASPIVTFVDDLYPSIFKQH HCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA