| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is kbl [C]
Identifier: 170026352
GI number: 170026352
Start: 4577441
End: 4578652
Strand: Reverse
Name: kbl [C]
Synonym: YPK_4145
Alternate gene names: 170026352
Gene position: 4578652-4577441 (Counterclockwise)
Preceding gene: 170026359
Following gene: 170026351
Centisome position: 97.64
GC content: 50.08
Gene sequence:
>1212_bases ATGTCCCTACCTTGTAACAAGCACCCCTTTTATCAGCAATTAGAACAACAACTCGACACGACTCGTACCGAAGGGTTGTA TAAAAACGAACGCGTTATTACTTCCGCACAGCAAGCGAATATCGCTGTTGCTGATGGCAGCCGGGTGATTAACTTTTGCG CCAATAACTATCTAGGGCTGGCAAATCATCCAAAACTTATTGCAGCCGCTAAAGCCGGCATGGATTCCCATGGGTTTGGC ATGGCTTCAGTCCGCTTTATCTGTGGTACCCAAGACATACATAAAGAGCTCGAACATAAGCTCGCCAGTTTCCTCGGGAT GGAAGACGCTATCCTGTACTCCTCTTGCTTTGATGCTAACGGCGGCCTATTTGAAACCCTGTTAGGGCCTGAAGATGCCA TTATTTCCGATGCGTTGAATCATGCCTCAATCATTGATGGCGTACGGTTATGTAAAGCCAAGCGTTATCGTTATGCCAAC AATGATATGACAGAGCTGGAAGCGCAGCTAAAACAAGCGAAAGCGGAGGGGGCTCGCCATATCATGATTGCCACCGATGG CGTGTTCTCCATGGATGGTGTGATTGCTAACTTAAAAAGGGTGTGTGACCTTGCTGATGAATATCAGGCGCTGGTTATGG TCGATGATTCACATGCGGTGGGGGTGATTGGTGCGAATGGGCGGGGGACTCATGAATACTGCGAAGTGATGGATCGCGTT GATATCATCACTGGTACCTTGGGCAAAGCACTCGGCGGTGCATCTGGCGGTTATACTGCCGGGCGCAAAGAGTTGGTCGA GTGGCTGCGCCAGCGTTCACGGCCTTATCTATTTTCAAACTCACTGGCTCCAGCGATTGTCGCCGCGTCCATTGAAGTCT TGTCACTGCTGGAAGAGGGAGGCGCATTGCGTGATCGTCTATGGGCGAATGCGCGTTTATTCCGTGAGAAAATGAGTGCT GCTGGTTTCACTTTGGCGGGTGCTGATCATGCCATTATTCCTGTCATGTTGGGTGAGGCTAAACTGGCGCAGGATTTTGC CAATGCCTTGCTGAAAGAAGGCATTTATGTCACTGGCTTCTTCTTCCCTGTCGTGCCGAAGGGCCAGGCCCGTATTCGTA CCCAGATGTCTGCAGGCCATACCACTGAGCAAGTTGAACGTGCCATCGAGGCATTTGTGCGTATTGGTAAGCAACTTAAC GTTATTGCGTAA
Upstream 100 bases:
>100_bases ATATGCTACATTTTCGACAATATAAGATAAGGTTTCTCGTCAGTTTGCCCACCAAGCAGTAAAATATTGTGTGCAATTGC CAATCCTGGAGATAACCGAA
Downstream 100 bases:
>100_bases GGGATTTTCATGAAAGCACTTTCTAAACTGAAAGCAGAAGAAGGCATTTGGATGACCGATGTGCCACAGCCAGAGCTGGG TCACAACGATATCATGATCA
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSLPCNKHPFYQQLEQQLDTTRTEGLYKNERVITSAQQANIAVADGSRVINFCANNYLGLANHPKLIAAAKAGMDSHGFG MASVRFICGTQDIHKELEHKLASFLGMEDAILYSSCFDANGGLFETLLGPEDAIISDALNHASIIDGVRLCKAKRYRYAN NDMTELEAQLKQAKAEGARHIMIATDGVFSMDGVIANLKRVCDLADEYQALVMVDDSHAVGVIGANGRGTHEYCEVMDRV DIITGTLGKALGGASGGYTAGRKELVEWLRQRSRPYLFSNSLAPAIVAASIEVLSLLEEGGALRDRLWANARLFREKMSA AGFTLAGADHAIIPVMLGEAKLAQDFANALLKEGIYVTGFFFPVVPKGQARIRTQMSAGHTTEQVERAIEAFVRIGKQLN VIA
Sequences:
>Translated_403_residues MSLPCNKHPFYQQLEQQLDTTRTEGLYKNERVITSAQQANIAVADGSRVINFCANNYLGLANHPKLIAAAKAGMDSHGFG MASVRFICGTQDIHKELEHKLASFLGMEDAILYSSCFDANGGLFETLLGPEDAIISDALNHASIIDGVRLCKAKRYRYAN NDMTELEAQLKQAKAEGARHIMIATDGVFSMDGVIANLKRVCDLADEYQALVMVDDSHAVGVIGANGRGTHEYCEVMDRV DIITGTLGKALGGASGGYTAGRKELVEWLRQRSRPYLFSNSLAPAIVAASIEVLSLLEEGGALRDRLWANARLFREKMSA AGFTLAGADHAIIPVMLGEAKLAQDFANALLKEGIYVTGFFFPVVPKGQARIRTQMSAGHTTEQVERAIEAFVRIGKQLN VIA >Mature_402_residues SLPCNKHPFYQQLEQQLDTTRTEGLYKNERVITSAQQANIAVADGSRVINFCANNYLGLANHPKLIAAAKAGMDSHGFGM ASVRFICGTQDIHKELEHKLASFLGMEDAILYSSCFDANGGLFETLLGPEDAIISDALNHASIIDGVRLCKAKRYRYANN DMTELEAQLKQAKAEGARHIMIATDGVFSMDGVIANLKRVCDLADEYQALVMVDDSHAVGVIGANGRGTHEYCEVMDRVD IITGTLGKALGGASGGYTAGRKELVEWLRQRSRPYLFSNSLAPAIVAASIEVLSLLEEGGALRDRLWANARLFREKMSAA GFTLAGADHAIIPVMLGEAKLAQDFANALLKEGIYVTGFFFPVVPKGQARIRTQMSAGHTTEQVERAIEAFVRIGKQLNV IA
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=386, Percent_Identity=56.9948186528497, Blast_Score=439, Evalue=1e-123, Organism=Homo sapiens, GI284448556, Length=412, Percent_Identity=53.6407766990291, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI83977442, Length=361, Percent_Identity=36.2880886426593, Blast_Score=228, Evalue=7e-60, Organism=Homo sapiens, GI83977440, Length=361, Percent_Identity=36.2880886426593, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI83977444, Length=361, Percent_Identity=36.2880886426593, Blast_Score=227, Evalue=1e-59, Organism=Homo sapiens, GI4502025, Length=398, Percent_Identity=32.4120603015075, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI40316939, Length=398, Percent_Identity=32.4120603015075, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI119220554, Length=369, Percent_Identity=34.1463414634146, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI4758668, Length=369, Percent_Identity=34.6883468834688, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI5454084, Length=380, Percent_Identity=27.1052631578947, Blast_Score=128, Evalue=1e-29, Organism=Escherichia coli, GI1790046, Length=394, Percent_Identity=84.7715736040609, Blast_Score=695, Evalue=0.0, Organism=Escherichia coli, GI1786993, Length=352, Percent_Identity=34.375, Blast_Score=196, Evalue=3e-51, Organism=Caenorhabditis elegans, GI71994529, Length=396, Percent_Identity=55.8080808080808, Blast_Score=441, Evalue=1e-124, Organism=Caenorhabditis elegans, GI32566772, Length=426, Percent_Identity=29.1079812206573, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17560912, Length=399, Percent_Identity=32.0802005012531, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17560914, Length=399, Percent_Identity=32.0802005012531, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI71982617, Length=372, Percent_Identity=25.8064516129032, Blast_Score=117, Evalue=9e-27, Organism=Caenorhabditis elegans, GI71982625, Length=372, Percent_Identity=25.8064516129032, Blast_Score=117, Evalue=9e-27, Organism=Saccharomyces cerevisiae, GI6320438, Length=383, Percent_Identity=32.6370757180157, Blast_Score=212, Evalue=8e-56, Organism=Saccharomyces cerevisiae, GI6320267, Length=371, Percent_Identity=30.188679245283, Blast_Score=175, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6323954, Length=265, Percent_Identity=29.811320754717, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI24662918, Length=390, Percent_Identity=57.1794871794872, Blast_Score=467, Evalue=1e-132, Organism=Drosophila melanogaster, GI17137420, Length=355, Percent_Identity=33.2394366197183, Blast_Score=201, Evalue=6e-52, Organism=Drosophila melanogaster, GI17136286, Length=372, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24653280, Length=332, Percent_Identity=27.4096385542169, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24653276, Length=332, Percent_Identity=27.4096385542169, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24653278, Length=332, Percent_Identity=27.4096385542169, Blast_Score=113, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011282 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 43770; Mature: 43638
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPCNKHPFYQQLEQQLDTTRTEGLYKNERVITSAQQANIAVADGSRVINFCANNYLGL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHCEEEEECCHHHHHHHHCCCCCC ANHPKLIAAAKAGMDSHGFGMASVRFICGTQDIHKELEHKLASFLGMEDAILYSSCFDAN CCCCCCHHHHHCCCCCCCCCHHHHEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC GGLFETLLGPEDAIISDALNHASIIDGVRLCKAKRYRYANNDMTELEAQLKQAKAEGARH CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCE IMIATDGVFSMDGVIANLKRVCDLADEYQALVMVDDSHAVGVIGANGRGTHEYCEVMDRV EEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHH DIITGTLGKALGGASGGYTAGRKELVEWLRQRSRPYLFSNSLAPAIVAASIEVLSLLEEG HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHC GALRDRLWANARLFREKMSAAGFTLAGADHAIIPVMLGEAKLAQDFANALLKEGIYVTGF CHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEE FFPVVPKGQARIRTQMSAGHTTEQVERAIEAFVRIGKQLNVIA EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLPCNKHPFYQQLEQQLDTTRTEGLYKNERVITSAQQANIAVADGSRVINFCANNYLGL CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHCEEEEECCHHHHHHHHCCCCCC ANHPKLIAAAKAGMDSHGFGMASVRFICGTQDIHKELEHKLASFLGMEDAILYSSCFDAN CCCCCCHHHHHCCCCCCCCCHHHHEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC GGLFETLLGPEDAIISDALNHASIIDGVRLCKAKRYRYANNDMTELEAQLKQAKAEGARH CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCE IMIATDGVFSMDGVIANLKRVCDLADEYQALVMVDDSHAVGVIGANGRGTHEYCEVMDRV EEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHH DIITGTLGKALGGASGGYTAGRKELVEWLRQRSRPYLFSNSLAPAIVAASIEVLSLLEEG HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHC GALRDRLWANARLFREKMSAAGFTLAGADHAIIPVMLGEAKLAQDFANALLKEGIYVTGF CHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEE FFPVVPKGQARIRTQMSAGHTTEQVERAIEAFVRIGKQLNVIA EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]