Click here to switch to the map view.

The map label for this gene is yjcH [H]

Identifier: 170026135

GI number: 170026135

Start: 4323271

End: 4323582

Strand: Direct

Name: yjcH [H]

Synonym: YPK_3922

Alternate gene names: 170026135

Gene position: 4323271-4323582 (Clockwise)

Preceding gene: 170026134

Following gene: 170026136

Centisome position: 92.19

GC content: 41.67

Gene sequence:

>312_bases
ATGAATGACAGCATTTATCAAGAGATTGAAGATAATCCACGTTTCCAAGAATTGGTGAAAAAACGCAGCCGCTTTGCCTG
GCTGTTGTCATTAATCACCTTAACGATGTATGTCGCTTTCATTTTTCTTATTGCTTTCGAACCACAATGGCTCGGTACTC
CGATATATACCGGCTCGAGTGTCACTCGTGGTATTCCTGTGGGCGTGGGATTAATTGTTACTTCTTTTATTCTTACAGGT
ATTTATGTTATCCGCGCTAATGGCGAATTTGACCGTCTGACGGCAGAAATTATTCGTGAGGTGAAGCAATGA

Upstream 100 bases:

>100_bases
AAAAATTACTAGAAGAAAAACAATCAATGCAGACACCGTCGTAAATTGTGCCGCCTATATAGGCGGCAAACTTAATTGAT
GCCTCAAAGGAGAGACTCTG

Downstream 100 bases:

>100_bases
AGATCCGCCATTGGTCTGCACTTTCTTTATTCGTTTTGCCTGCGCTAGCACAGGCGGAAGCACTTACCGGCGAGGTCCAC
CGCCAACCCCTCAATATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNDSIYQEIEDNPRFQELVKKRSRFAWLLSLITLTMYVAFIFLIAFEPQWLGTPIYTGSSVTRGIPVGVGLIVTSFILTG
IYVIRANGEFDRLTAEIIREVKQ

Sequences:

>Translated_103_residues
MNDSIYQEIEDNPRFQELVKKRSRFAWLLSLITLTMYVAFIFLIAFEPQWLGTPIYTGSSVTRGIPVGVGLIVTSFILTG
IYVIRANGEFDRLTAEIIREVKQ
>Mature_103_residues
MNDSIYQEIEDNPRFQELVKKRSRFAWLLSLITLTMYVAFIFLIAFEPQWLGTPIYTGSSVTRGIPVGVGLIVTSFILTG
IYVIRANGEFDRLTAEIIREVKQ

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=102, Percent_Identity=64.7058823529412, Blast_Score=142, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 11788; Mature: 11788

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSIYQEIEDNPRFQELVKKRSRFAWLLSLITLTMYVAFIFLIAFEPQWLGTPIYTGSS
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VTRGIPVGVGLIVTSFILTGIYVIRANGEFDRLTAEIIREVKQ
CCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDSIYQEIEDNPRFQELVKKRSRFAWLLSLITLTMYVAFIFLIAFEPQWLGTPIYTGSS
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VTRGIPVGVGLIVTSFILTGIYVIRANGEFDRLTAEIIREVKQ
CCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]