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The map label for this gene is rhaM

Identifier: 170026062

GI number: 170026062

Start: 4238695

End: 4239009

Strand: Direct

Name: rhaM

Synonym: YPK_3849

Alternate gene names: 170026062

Gene position: 4238695-4239009 (Clockwise)

Preceding gene: 170026061

Following gene: 170026064

Centisome position: 90.39

GC content: 50.48

Gene sequence:

>315_bases
ATGATACGTAAAGCGTTTGTTATGGCAGTAAATCCGGATGCCCATGCTGAATATCAGCGACGGCACACGCCAATCTGGCC
AGAGCTGGAAAGCGTGCTGAAAGCGCATGGCGCTCACCACTATTCCATTTTCCTTGATGAGACTCGCAATTTACTGTTTG
GCGTTGTCGAAATTGAATCAGAAGAACGCTGGAATGCGGTGGCTCAAACCGCCGAGTGTCAACGCTGGTGGCAACATATG
GCTGATGTCATGCCAAGCCACCCGGATAACAGCCCTGTGAGTCAGGCTCTGCGCGAAGTATTTTATCTGGAATGA

Upstream 100 bases:

>100_bases
AAAGCGCTGGCTGACCCTTGTGCTCCTTGTAACCCACGTTCTGCAGATCGGGAACAAATTCGCACACTGTACTTACAGGC
ACTTTAAGCGAGGGAATATG

Downstream 100 bases:

>100_bases
AATGTTTTACCTGAAATGAAGTTCTTACCTGAAATGAAGTTTCTTGCCTGGAACAGAAATAACAACGTTAATGACGAAGC
GCCCGCCACGGAGAGAACAG

Product: L-rhamnose 1-epimerase

Products: NA

Alternate protein names: Rhamnose 1-epimerase; Type-3 mutarotase

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MIRKAFVMAVNPDAHAEYQRRHTPIWPELESVLKAHGAHHYSIFLDETRNLLFGVVEIESEERWNAVAQTAECQRWWQHM
ADVMPSHPDNSPVSQALREVFYLE

Sequences:

>Translated_104_residues
MIRKAFVMAVNPDAHAEYQRRHTPIWPELESVLKAHGAHHYSIFLDETRNLLFGVVEIESEERWNAVAQTAECQRWWQHM
ADVMPSHPDNSPVSQALREVFYLE
>Mature_104_residues
MIRKAFVMAVNPDAHAEYQRRHTPIWPELESVLKAHGAHHYSIFLDETRNLLFGVVEIESEERWNAVAQTAECQRWWQHM
ADVMPSHPDNSPVSQALREVFYLE

Specific function: Involved in the anomeric conversion of L-rhamnose

COG id: COG3254

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose mutarotase family

Homologues:

Organism=Escherichia coli, GI1790335, Length=103, Percent_Identity=77.6699029126214, Blast_Score=177, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHAM_YERP3 (A7FN85)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001402713.1
- ProteinModelPortal:   A7FN85
- SMR:   A7FN85
- STRING:   A7FN85
- GeneID:   5386897
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_3759
- eggNOG:   COG3254
- HOGENOM:   HBG649684
- OMA:   KDHGAHH
- ProtClustDB:   CLSK2519544
- BioCyc:   YPSE349747:YPSIP31758_3759-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01663
- InterPro:   IPR013448
- InterPro:   IPR008000
- TIGRFAMs:   TIGR02625

Pfam domain/function: PF05336 DUF718

EC number: NA

Molecular weight: Translated: 12198; Mature: 12198

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: ACT_SITE 22-22 BINDING 18-18 BINDING 41-41

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKAFVMAVNPDAHAEYQRRHTPIWPELESVLKAHGAHHYSIFLDETRNLLFGVVEIES
CCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHCCCCEEEEEHCCHHHHHHHHEEECC
EERWNAVAQTAECQRWWQHMADVMPSHPDNSPVSQALREVFYLE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIRKAFVMAVNPDAHAEYQRRHTPIWPELESVLKAHGAHHYSIFLDETRNLLFGVVEIES
CCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHCCCCEEEEEHCCHHHHHHHHEEECC
EERWNAVAQTAECQRWWQHMADVMPSHPDNSPVSQALREVFYLE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA