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The map label for this gene is glnM [H]

Identifier: 170025545

GI number: 170025545

Start: 3648834

End: 3649502

Strand: Reverse

Name: glnM [H]

Synonym: YPK_3328

Alternate gene names: 170025545

Gene position: 3649502-3648834 (Counterclockwise)

Preceding gene: 170025546

Following gene: 170025544

Centisome position: 77.82

GC content: 54.71

Gene sequence:

>669_bases
ATGACCTATCAGCTAAATTTTGCTGCTCTGTGGCCTTATTTGCCCGAATTACTGTCGGGTCTGCTGACCACCATTGAGCT
GACGGTTATGGCGACCATCGGGGGCATTGCATTGGGGATCTGCGGGGCTGCGATCCGCTGTGGCAACACCGTGATATTGC
GGCGTCTCTGGGGAGGTTATGTGGAAATTGTCCGTAACACCCCGTTTGTCGTGCAACTATTTTTCATCGTTTTTGGTCTA
CCGGCGCTGGGGCTAAAGTTAAGTGCCGGGCAGGCCGCCCTGCTGGCGATGACAATCAATCTGGGCGCTTACAGCACGGA
GATTATCCGTTCGGGCATTCAGGCCAGTGCCAAAGGCCAATGGGAGGCCGCGCGGGTTCTGGGCTTGAGCCGTAGCCAGA
CCTTTTTCCGCGTGATCCTGCCGCCGTCATTGCAGCGGATTTATCCGGCGCTGGTCAGTCAATGCATCATTGTTATGCTC
GGTTCAGCCGTGGTGTCACAAGTTTCATTTGAAGAACTGACCTTCGCCGCCAATCTTATTCAGTCGCGGACTTTCCTCAG
TTTTGAGGTCTATCTGGTGACCACCTTGCTGTATTTGTTGTTCGCTATCGTGATGCGCCAGCTATTGCTGGCGGCCGGGC
GTCGATACTTTGGGAGCCATGCCTCATGA

Upstream 100 bases:

>100_bases
GATTGGTGACGCGTTGCAGGACAATACGCTGAATGGCTTATCGGAGAAATGGTTGAAAGCGCCGTTACCTGCTGATCTTG
GTGCATAACGGGAGCCGGCT

Downstream 100 bases:

>100_bases
CATTTACTGACTGGGATATCATCCGCAACCTGCTATTGGCGGCCCGCTGGACGCTGTTACTGTCACTCACGGCCTTCTTC
GGTGGCACGTTGGTGACATT

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTYQLNFAALWPYLPELLSGLLTTIELTVMATIGGIALGICGAAIRCGNTVILRRLWGGYVEIVRNTPFVVQLFFIVFGL
PALGLKLSAGQAALLAMTINLGAYSTEIIRSGIQASAKGQWEAARVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVML
GSAVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLLYLLFAIVMRQLLLAAGRRYFGSHAS

Sequences:

>Translated_222_residues
MTYQLNFAALWPYLPELLSGLLTTIELTVMATIGGIALGICGAAIRCGNTVILRRLWGGYVEIVRNTPFVVQLFFIVFGL
PALGLKLSAGQAALLAMTINLGAYSTEIIRSGIQASAKGQWEAARVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVML
GSAVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLLYLLFAIVMRQLLLAAGRRYFGSHAS
>Mature_221_residues
TYQLNFAALWPYLPELLSGLLTTIELTVMATIGGIALGICGAAIRCGNTVILRRLWGGYVEIVRNTPFVVQLFFIVFGLP
ALGLKLSAGQAALLAMTINLGAYSTEIIRSGIQASAKGQWEAARVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLG
SAVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLLYLLFAIVMRQLLLAAGRRYFGSHAS

Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=195, Percent_Identity=34.8717948717949, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=32.7102803738318, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1786873, Length=221, Percent_Identity=29.4117647058824, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787086, Length=186, Percent_Identity=29.5698924731183, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1788646, Length=218, Percent_Identity=26.605504587156, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1787087, Length=216, Percent_Identity=28.2407407407407, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI48994930, Length=215, Percent_Identity=30.2325581395349, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788645, Length=210, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI87082239, Length=194, Percent_Identity=29.3814432989691, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786874, Length=201, Percent_Identity=26.865671641791, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24215; Mature: 24084

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYQLNFAALWPYLPELLSGLLTTIELTVMATIGGIALGICGAAIRCGNTVILRRLWGGY
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VEIVRNTPFVVQLFFIVFGLPALGLKLSAGQAALLAMTINLGAYSTEIIRSGIQASAKGQ
HHHHHCCCHHHHHHHHHHCCHHHCEEECCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCC
WEAARVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSFEELTFAANLI
HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSRTFLSFEVYLVTTLLYLLFAIVMRQLLLAAGRRYFGSHAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC
>Mature Secondary Structure 
TYQLNFAALWPYLPELLSGLLTTIELTVMATIGGIALGICGAAIRCGNTVILRRLWGGY
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VEIVRNTPFVVQLFFIVFGLPALGLKLSAGQAALLAMTINLGAYSTEIIRSGIQASAKGQ
HHHHHCCCHHHHHHHHHHCCHHHCEEECCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCC
WEAARVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSFEELTFAANLI
HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSRTFLSFEVYLVTTLLYLLFAIVMRQLLLAAGRRYFGSHAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]