Click here to switch to the map view.

The map label for this gene is fliY [H]

Identifier: 170025546

GI number: 170025546

Start: 3649515

End: 3650303

Strand: Reverse

Name: fliY [H]

Synonym: YPK_3329

Alternate gene names: 170025546

Gene position: 3650303-3649515 (Counterclockwise)

Preceding gene: 170025547

Following gene: 170025545

Centisome position: 77.84

GC content: 49.81

Gene sequence:

>789_bases
ATGAACATAAAAAAGCGGATGTTGTGGCTGTGGGCAGTACTGGTATTGGTTCAGGCCCCTGCGGTATTAGCGGATCAATT
AGAGAAAATACAACAGCGTGGAGTCTTGCGTGTGGCAGTACCTCAAGATTTTCCGCCTTTTGGTTCAGTAGGAACCGATC
TTCAGCCACAGGGCTATGATATCGATATGGCTCAGTACCTGGCCGATAAAATGAAACTAAAGTTGCAATTAGTGCCAGTG
ACCAGTGCCAATCGGGTGCCTTATCTGCAAACCGATAAAGTGGATTTGGTGATTTCCAGTCTGGGTAAAAATCCGGAGCG
GGAAAAAGCCATCGCCTTTAGCCGTGCTTATGCGCCGTTTTTCCTCGGCGTATTTGGGGCTAAAGATGATGAACTGAAGC
AACCGGAACAACTGGCGGGTAAAACCATTGGTGTCACTCGTGGGGCGGTGGAAGACATGGTATTAAGCGAGATCGCGCCG
AAAGCGGCTCAGATCAGACGCTATGAGGATAACAACACCACGCTGTCGGCCTATCTATCCGGTCAGGTTAATTATCTGGC
AACCGGCAATCTGGTTATCAGCGCCTTGGCCCGCCAGAATCCTAAGCAGGCACCCGTCGCAAAATTTATGCTGAAAGATT
CACCGTGTTATATCGGCCTGCGTCAGGGAGAACCGGCACTGAAAGCTAAAGTGGACGCCTTGATTGGTGACGCGTTGCAG
GACAATACGCTGAATGGCTTATCGGAGAAATGGTTGAAAGCGCCGTTACCTGCTGATCTTGGTGCATAA

Upstream 100 bases:

>100_bases
TTTTTGCCTTGTTCCTGGTTGGCATGGTACTTGCAACGATAATTTCAATTCTGTTTTTTAAGAATCCATTGTTTCATTGT
TGAGTTATCGGAGATAGGCT

Downstream 100 bases:

>100_bases
CGGGAGCCGGCTATGACCTATCAGCTAAATTTTGCTGCTCTGTGGCCTTATTTGCCCGAATTACTGTCGGGTCTGCTGAC
CACCATTGAGCTGACGGTTA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNIKKRMLWLWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAQYLADKMKLKLQLVPV
TSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAP
KAAQIRRYEDNNTTLSAYLSGQVNYLATGNLVISALARQNPKQAPVAKFMLKDSPCYIGLRQGEPALKAKVDALIGDALQ
DNTLNGLSEKWLKAPLPADLGA

Sequences:

>Translated_262_residues
MNIKKRMLWLWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAQYLADKMKLKLQLVPV
TSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAP
KAAQIRRYEDNNTTLSAYLSGQVNYLATGNLVISALARQNPKQAPVAKFMLKDSPCYIGLRQGEPALKAKVDALIGDALQ
DNTLNGLSEKWLKAPLPADLGA
>Mature_262_residues
MNIKKRMLWLWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAQYLADKMKLKLQLVPV
TSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAP
KAAQIRRYEDNNTTLSAYLSGQVNYLATGNLVISALARQNPKQAPVAKFMLKDSPCYIGLRQGEPALKAKVDALIGDALQ
DNTLNGLSEKWLKAPLPADLGA

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=233, Percent_Identity=26.1802575107296, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787088, Length=226, Percent_Identity=25.2212389380531, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787085, Length=225, Percent_Identity=25.7777777777778, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1786876, Length=243, Percent_Identity=24.2798353909465, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788649, Length=235, Percent_Identity=23.8297872340426, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788648, Length=226, Percent_Identity=23.8938053097345, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28646; Mature: 28646

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKKRMLWLWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCC
IDMAQYLADKMKLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPF
CHHHHHHHHHHEEEEEEEEECCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
FLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKAAQIRRYEDNNTTLSAYLS
HHHHHCCCCHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHEEECCCCCEEEEEEC
GQVNYLATGNLVISALARQNPKQAPVAKFMLKDSPCYIGLRQGEPALKAKVDALIGDALQ
CCEEEEEECHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
DNTLNGLSEKWLKAPLPADLGA
CCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNIKKRMLWLWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCC
IDMAQYLADKMKLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPF
CHHHHHHHHHHEEEEEEEEECCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
FLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKAAQIRRYEDNNTTLSAYLS
HHHHHCCCCHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHEEECCCCCEEEEEEC
GQVNYLATGNLVISALARQNPKQAPVAKFMLKDSPCYIGLRQGEPALKAKVDALIGDALQ
CCEEEEEECHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
DNTLNGLSEKWLKAPLPADLGA
CCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]