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The map label for this gene is mtnB [H]

Identifier: 170025538

GI number: 170025538

Start: 3641370

End: 3642038

Strand: Reverse

Name: mtnB [H]

Synonym: YPK_3321

Alternate gene names: 170025538

Gene position: 3642038-3641370 (Counterclockwise)

Preceding gene: 170025541

Following gene: 170025537

Centisome position: 77.66

GC content: 52.77

Gene sequence:

>669_bases
ATGACCGAAAATAGACAACTTGGCGCGCTGTTAGCCGCCTGCCACTGGATCGGCGAAAAGGGCTGGTGCCCGGCGACTGG
CGGTAATATGTCCCTGAGGCTGGATTTGGCCCACTGTTTAATCACTGAATCTGGTAAAGATAAAGGCAGCCTGGCCGCAG
AAGATTTCCTGCTGGTAGAAACCGCCAATAACCATGTGCCGAGTGGCCGCACGCCGTCGGCAGAGACCGGCCTGCATACC
TTGCTGTATCGTCTGTATCCTGAAATCCAGGCGGTGCTACACACACACTCGGTGAATGCCACGGTGCTGTCACGGGTTGA
GCGCAGTAATGCGTTAGTGTTGCAAGGCTATGAGATGCAAAAGTCGTTGTCAGGTCAGCGAAGCCATCTGGACGCGGTGG
TGATCCCCATTTTTGATAACGACCAGGATATTCCTGTGTTGGCGCAGCGGGTGGCGGCTTATGCTGATAACCGCCCGCTA
CAGTATGGATTTTTGGTGCGTGGTCATGGTTTGTACTGTTGGGGTAATAGCGTGGTTGAAGCCCGTCGCCATCTGGAAGG
GCTGGAGTTTTTGTTCCAGTGCGAGCTACAACGCCGTTTATTTGATGTGAATTCTAACGTTGATGTAAAACCTAACGTTG
ACGTAAATCCTAACGTGGAGGCCAAATGA

Upstream 100 bases:

>100_bases
ATAACACGATGTTAAGATTTGGCAATCAAGACGCTTAGATGTTTAAACGGCTAAAACAGCACAAATACTGGCAGTACAAA
CACCACAACAGGGATATGCA

Downstream 100 bases:

>100_bases
TTCAGGCGATTGTTACCGATATTGAAGGCACCACCACTGACATCCGTTTTGTCCATCAAGTGCTGTTTCCTTATGCCCGT
GAGCGGTTGACACCTTTCTT

Product: methylthioribulose-1-phosphate dehydratase

Products: NA

Alternate protein names: MTRu-1-P dehydratase [H]

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTENRQLGALLAACHWIGEKGWCPATGGNMSLRLDLAHCLITESGKDKGSLAAEDFLLVETANNHVPSGRTPSAETGLHT
LLYRLYPEIQAVLHTHSVNATVLSRVERSNALVLQGYEMQKSLSGQRSHLDAVVIPIFDNDQDIPVLAQRVAAYADNRPL
QYGFLVRGHGLYCWGNSVVEARRHLEGLEFLFQCELQRRLFDVNSNVDVKPNVDVNPNVEAK

Sequences:

>Translated_222_residues
MTENRQLGALLAACHWIGEKGWCPATGGNMSLRLDLAHCLITESGKDKGSLAAEDFLLVETANNHVPSGRTPSAETGLHT
LLYRLYPEIQAVLHTHSVNATVLSRVERSNALVLQGYEMQKSLSGQRSHLDAVVIPIFDNDQDIPVLAQRVAAYADNRPL
QYGFLVRGHGLYCWGNSVVEARRHLEGLEFLFQCELQRRLFDVNSNVDVKPNVDVNPNVEAK
>Mature_221_residues
TENRQLGALLAACHWIGEKGWCPATGGNMSLRLDLAHCLITESGKDKGSLAAEDFLLVETANNHVPSGRTPSAETGLHTL
LYRLYPEIQAVLHTHSVNATVLSRVERSNALVLQGYEMQKSLSGQRSHLDAVVIPIFDNDQDIPVLAQRVAAYADNRPLQ
YGFLVRGHGLYCWGNSVVEARRHLEGLEFLFQCELQRRLFDVNSNVDVKPNVDVNPNVEAK

Specific function: Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) [H]

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. MtnB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303
- InterPro:   IPR017714 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: =4.2.1.109 [H]

Molecular weight: Translated: 24613; Mature: 24482

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENRQLGALLAACHWIGEKGWCPATGGNMSLRLDLAHCLITESGKDKGSLAAEDFLLVE
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEE
TANNHVPSGRTPSAETGLHTLLYRLYPEIQAVLHTHSVNATVLSRVERSNALVLQGYEMQ
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCHHH
KSLSGQRSHLDAVVIPIFDNDQDIPVLAQRVAAYADNRPLQYGFLVRGHGLYCWGNSVVE
HHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCEEEEECCHHHH
ARRHLEGLEFLFQCELQRRLFDVNSNVDVKPNVDVNPNVEAK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TENRQLGALLAACHWIGEKGWCPATGGNMSLRLDLAHCLITESGKDKGSLAAEDFLLVE
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEE
TANNHVPSGRTPSAETGLHTLLYRLYPEIQAVLHTHSVNATVLSRVERSNALVLQGYEMQ
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCHHH
KSLSGQRSHLDAVVIPIFDNDQDIPVLAQRVAAYADNRPLQYGFLVRGHGLYCWGNSVVE
HHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCEEEEECCHHHH
ARRHLEGLEFLFQCELQRRLFDVNSNVDVKPNVDVNPNVEAK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA