| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170025337
Identifier: 170025337
GI number: 170025337
Start: 3414637
End: 3415167
Strand: Reverse
Name: 170025337
Synonym: YPK_3118
Alternate gene names: NA
Gene position: 3415167-3414637 (Counterclockwise)
Preceding gene: 170025338
Following gene: 170025336
Centisome position: 72.83
GC content: 35.59
Gene sequence:
>531_bases ATGAACTTTATAGTTATTGCAGCTATTCTTGGATTAATACCCGCCTTTATCGCACAAAGTAAAGGGCGATCATTTGGATT GTGGTGGCTATATGGGGCTTTAATTTTCATCGTTGCATTAATTCATTCTATTTTCATTAGTGGAGATGCGCGGGATATTG AAAAGGTAAAACTGAGTCAGGGTATGGTTAAATGCCCATTTTGTGCGGAGATAATTAAGAATGAAGCGATTAAGTGCAAA CATTGCGGCAGTGATATTAATTTAGCCATTGATTTAGATGCTTCAGTGAAAGAATTTAATGTATCAGACTTACCTTGTGA ATTGTTTTTTACACGGAGTAATGCCACTTTTCATGTAAATGATGACGCAATTAAGGGCATGGTTGATAACATAAAGAAAG CGAACCCAGGAATTCATCCCATGAATTTAATATCCCGACATATTAGGGATGTTGAGGCATTACAAAGTAAATTGCCTGGC AGCGTAAAGAACGATTTTATTTCACGCTATAACTATTGGATAAATAAATAA
Upstream 100 bases:
>100_bases ATAAAGCATTACCACCATCATCTGATTTTTGCCTTAGTTCATTTTTTAGGGGCGTGATCAATGCTATAATTTCCAGAAAA TCGCATTTGGAGATCAGGCA
Downstream 100 bases:
>100_bases GTCACAGCGTTAATAAAGAATTACTGAAAATATCACCCGCCATCGTGCGGGTTTTTTCATTTCTGGAGGGGTGTAAATGT CACTGATCAGCAATGCACTT
Product: phage-related membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MNFIVIAAILGLIPAFIAQSKGRSFGLWWLYGALIFIVALIHSIFISGDARDIEKVKLSQGMVKCPFCAEIIKNEAIKCK HCGSDINLAIDLDASVKEFNVSDLPCELFFTRSNATFHVNDDAIKGMVDNIKKANPGIHPMNLISRHIRDVEALQSKLPG SVKNDFISRYNYWINK
Sequences:
>Translated_176_residues MNFIVIAAILGLIPAFIAQSKGRSFGLWWLYGALIFIVALIHSIFISGDARDIEKVKLSQGMVKCPFCAEIIKNEAIKCK HCGSDINLAIDLDASVKEFNVSDLPCELFFTRSNATFHVNDDAIKGMVDNIKKANPGIHPMNLISRHIRDVEALQSKLPG SVKNDFISRYNYWINK >Mature_176_residues MNFIVIAAILGLIPAFIAQSKGRSFGLWWLYGALIFIVALIHSIFISGDARDIEKVKLSQGMVKCPFCAEIIKNEAIKCK HCGSDINLAIDLDASVKEFNVSDLPCELFFTRSNATFHVNDDAIKGMVDNIKKANPGIHPMNLISRHIRDVEALQSKLPG SVKNDFISRYNYWINK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19669; Mature: 19669
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIVIAAILGLIPAFIAQSKGRSFGLWWLYGALIFIVALIHSIFISGDARDIEKVKLSQ CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GMVKCPFCAEIIKNEAIKCKHCGSDINLAIDLDASVKEFNVSDLPCELFFTRSNATFHVN CCEECHHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHCCCCCCCEEEEEEECCCEEEEC DDAIKGMVDNIKKANPGIHPMNLISRHIRDVEALQSKLPGSVKNDFISRYNYWINK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNFIVIAAILGLIPAFIAQSKGRSFGLWWLYGALIFIVALIHSIFISGDARDIEKVKLSQ CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GMVKCPFCAEIIKNEAIKCKHCGSDINLAIDLDASVKEFNVSDLPCELFFTRSNATFHVN CCEECHHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHCCCCCCCEEEEEEECCCEEEEC DDAIKGMVDNIKKANPGIHPMNLISRHIRDVEALQSKLPGSVKNDFISRYNYWINK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA