| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025338
Identifier: 170025338
GI number: 170025338
Start: 3415271
End: 3417217
Strand: Reverse
Name: 170025338
Synonym: YPK_3119
Alternate gene names: NA
Gene position: 3417217-3415271 (Counterclockwise)
Preceding gene: 170025339
Following gene: 170025337
Centisome position: 72.87
GC content: 44.94
Gene sequence:
>1947_bases GTGGCTAATTCATTTGATTTCGAGTTAACAGCAACAGACCAGGCGTCAGCATCCATTCAGCGTATAGATGAAGCCGTTAA AAATCTATTACCCGACCTTGATAGAACGCGAGACGGGCTTAAGCTTGGAGGGCAGGAGTCAGCAGAGGGCCTTGATGATC TGAATGACCGATTGAAAGGGATGGGGCAACTCGCCAGAGAGGGGGTGCAATTTGTTGGGGACTTGGTGCCACCATTAAAG ATGGTCGGCGAGATCGGTAGCGCAGCACTAAAATTTGGCGCTGTGGGAGGGATCGCTTATACAGCAGTTAAAGCGGTTCA AGGGCTGAAGTCTGTTGCTGAGGCCGCTTACTCACTTGATACAGCAGCAAAAAACGCAGGCATGTCAGTTGATGATTTCA GCCGATTGGCTGGAGCTATGCAGATTTTGGGTATTGATGGGAGTTCTGCACAGAAATCAGTTGAAGGGCTCTACAAAACA CTGAATGACCCGTTATGGGCACGTAACGATACGACACAGGCACTATTGGTCCAAAACGGTATACAGATTGAGCGCAATAA AGATGGTACAGCAAACGTACTTAAGACGATGGAAAACATTGCAAAAGTATTCCCGAGCATTGCTCCGCACATGCAAAAAA CTTTAGCAGACGCGTTAGGATTGGATGCAAATACACTATCTCTTTTGCGGGAGGGGACAAGGTTTAAGGAATTACTGACA AAAGCAGATAAGATTGGCTTAACTGTTGATCCTGAAACCAATGCGCAACTTGTTGAACTAAATGCTCAATTAAATGAGGC CAGCGCCGTGCTTGATGGTTTATTTATAAAAGCCAAAACATGGGGTGCTCAAAAATTATTAACGGGAGATGCATCGTTCG ATCCCGCCATCGCTGTGGCTGGAGGCCTTGTAGGACTGTCTTTCGCGTCCGTATCGAATGCTCCTGCCATTGCGGCATTT GAGAATAGCAAAAAATATATTGGCGATGATGAAAACTCTTTTGCGCATGGCGATAAGCAGAAGGATATTCTTCATCGGGC CCGTGTTGACGATAAATTCAAAGATACTTTGTCATTTAAAGAGAAAACCTATTTAACTCTGGGATATCCGGATAAGGATT TTACTCAAAAATTGAATGATCAGTATGGGGAGGCATGGGAAGAGCAGGAAAAGAAACGGCTGGAGGCAGAAAAGAAAAAA CTAGCAGCCCCGGACAAGACTCCTTACTCGTTAACGTCTTCAGCGCTCACAGCACCAAAATCAGGACAGGATGCACTCGG CGTTAGAAATAATAATCCCGGAAATTTAAGGGTTGCACCCAACTCTACGGGGAAGAATGGGGGTTTTTCCACATTTGCCA ATCCGCAGGAAGGGATAGCAGCGCTCGCCCGGCAATTACAGCTTTATGGTGACAGGGGAAACAATACGCTTTCCGGCATC TTACATACCTATGCGCCAAGTACAGAAAATAACACCCAAGGTTATATTAACGCCGTTTCTGGCGTTACGGGGGCGAATCC GTATGAGCGATTAAACCTCCATTCGCCCGAAGTTTTGAAAAAATTAGTTACATCGATCATTGGCCATGAAAATGGCTATC AACCATACAGCTCTGGAGATATTGACGACGGAATCAATGCTTCAATTAATGATGATCGCTGGAAAGGGCTGCGTAATCCT AATATTTTATTATCGCAACGCCAGTCCCTAAATTCCGATAATGAGGAACCAAATGCAACCACAGGGGATATTACTACAAA TAACCGACCTTCAATTTTAACCCCGCAACCCAGTAACGGTCATGTAATTACCGATATAAATCAAGGTGTTGGAGTTGAAA AGTCAGAGGTTGAAATTACGTTGATTAATGAAAGAACTGGTGAGCGTCAGAAAATTACAGCAGCAAGAGGGGCTAAGGTA TCAACATCAATGAACTACGCTGGATGA
Upstream 100 bases:
>100_bases TAACTGGGGTCCGGGCGATGCCTGGTCCCTGACCTACAATGAATTAATGTGGTGGTGCCAGCAGGCTGAGCGGATTAACA AGACCAAGGCGGGAAAGTAA
Downstream 100 bases:
>100_bases AGTATAAAGCATTACCACCATCATCTGATTTTTGCCTTAGTTCATTTTTTAGGGGCGTGATCAATGCTATAATTTCCAGA AAATCGCATTTGGAGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MANSFDFELTATDQASASIQRIDEAVKNLLPDLDRTRDGLKLGGQESAEGLDDLNDRLKGMGQLAREGVQFVGDLVPPLK MVGEIGSAALKFGAVGGIAYTAVKAVQGLKSVAEAAYSLDTAAKNAGMSVDDFSRLAGAMQILGIDGSSAQKSVEGLYKT LNDPLWARNDTTQALLVQNGIQIERNKDGTANVLKTMENIAKVFPSIAPHMQKTLADALGLDANTLSLLREGTRFKELLT KADKIGLTVDPETNAQLVELNAQLNEASAVLDGLFIKAKTWGAQKLLTGDASFDPAIAVAGGLVGLSFASVSNAPAIAAF ENSKKYIGDDENSFAHGDKQKDILHRARVDDKFKDTLSFKEKTYLTLGYPDKDFTQKLNDQYGEAWEEQEKKRLEAEKKK LAAPDKTPYSLTSSALTAPKSGQDALGVRNNNPGNLRVAPNSTGKNGGFSTFANPQEGIAALARQLQLYGDRGNNTLSGI LHTYAPSTENNTQGYINAVSGVTGANPYERLNLHSPEVLKKLVTSIIGHENGYQPYSSGDIDDGINASINDDRWKGLRNP NILLSQRQSLNSDNEEPNATTGDITTNNRPSILTPQPSNGHVITDINQGVGVEKSEVEITLINERTGERQKITAARGAKV STSMNYAG
Sequences:
>Translated_648_residues MANSFDFELTATDQASASIQRIDEAVKNLLPDLDRTRDGLKLGGQESAEGLDDLNDRLKGMGQLAREGVQFVGDLVPPLK MVGEIGSAALKFGAVGGIAYTAVKAVQGLKSVAEAAYSLDTAAKNAGMSVDDFSRLAGAMQILGIDGSSAQKSVEGLYKT LNDPLWARNDTTQALLVQNGIQIERNKDGTANVLKTMENIAKVFPSIAPHMQKTLADALGLDANTLSLLREGTRFKELLT KADKIGLTVDPETNAQLVELNAQLNEASAVLDGLFIKAKTWGAQKLLTGDASFDPAIAVAGGLVGLSFASVSNAPAIAAF ENSKKYIGDDENSFAHGDKQKDILHRARVDDKFKDTLSFKEKTYLTLGYPDKDFTQKLNDQYGEAWEEQEKKRLEAEKKK LAAPDKTPYSLTSSALTAPKSGQDALGVRNNNPGNLRVAPNSTGKNGGFSTFANPQEGIAALARQLQLYGDRGNNTLSGI LHTYAPSTENNTQGYINAVSGVTGANPYERLNLHSPEVLKKLVTSIIGHENGYQPYSSGDIDDGINASINDDRWKGLRNP NILLSQRQSLNSDNEEPNATTGDITTNNRPSILTPQPSNGHVITDINQGVGVEKSEVEITLINERTGERQKITAARGAKV STSMNYAG >Mature_647_residues ANSFDFELTATDQASASIQRIDEAVKNLLPDLDRTRDGLKLGGQESAEGLDDLNDRLKGMGQLAREGVQFVGDLVPPLKM VGEIGSAALKFGAVGGIAYTAVKAVQGLKSVAEAAYSLDTAAKNAGMSVDDFSRLAGAMQILGIDGSSAQKSVEGLYKTL NDPLWARNDTTQALLVQNGIQIERNKDGTANVLKTMENIAKVFPSIAPHMQKTLADALGLDANTLSLLREGTRFKELLTK ADKIGLTVDPETNAQLVELNAQLNEASAVLDGLFIKAKTWGAQKLLTGDASFDPAIAVAGGLVGLSFASVSNAPAIAAFE NSKKYIGDDENSFAHGDKQKDILHRARVDDKFKDTLSFKEKTYLTLGYPDKDFTQKLNDQYGEAWEEQEKKRLEAEKKKL AAPDKTPYSLTSSALTAPKSGQDALGVRNNNPGNLRVAPNSTGKNGGFSTFANPQEGIAALARQLQLYGDRGNNTLSGIL HTYAPSTENNTQGYINAVSGVTGANPYERLNLHSPEVLKKLVTSIIGHENGYQPYSSGDIDDGINASINDDRWKGLRNPN ILLSQRQSLNSDNEEPNATTGDITTNNRPSILTPQPSNGHVITDINQGVGVEKSEVEITLINERTGERQKITAARGAKVS TSMNYAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69439; Mature: 69308
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSFDFELTATDQASASIQRIDEAVKNLLPDLDRTRDGLKLGGQESAEGLDDLNDRLKG CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCCCCHHCHHHHHHHHHHH MGQLAREGVQFVGDLVPPLKMVGEIGSAALKFGAVGGIAYTAVKAVQGLKSVAEAAYSLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH TAAKNAGMSVDDFSRLAGAMQILGIDGSSAQKSVEGLYKTLNDPLWARNDTTQALLVQNG HHHHHCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC IQIERNKDGTANVLKTMENIAKVFPSIAPHMQKTLADALGLDANTLSLLREGTRFKELLT EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH KADKIGLTVDPETNAQLVELNAQLNEASAVLDGLFIKAKTWGAQKLLTGDASFDPAIAVA HHHHCCEEECCCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCHHEEECCCCCCCHHHHH GGLVGLSFASVSNAPAIAAFENSKKYIGDDENSFAHGDKQKDILHRARVDDKFKDTLSFK HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC EKTYLTLGYPDKDFTQKLNDQYGEAWEEQEKKRLEAEKKKLAAPDKTPYSLTSSALTAPK CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC SGQDALGVRNNNPGNLRVAPNSTGKNGGFSTFANPQEGIAALARQLQLYGDRGNNTLSGI CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH LHTYAPSTENNTQGYINAVSGVTGANPYERLNLHSPEVLKKLVTSIIGHENGYQPYSSGD HHHCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC IDDGINASINDDRWKGLRNPNILLSQRQSLNSDNEEPNATTGDITTNNRPSILTPQPSNG CCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC HVITDINQGVGVEKSEVEITLINERTGERQKITAARGAKVSTSMNYAG CEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCEEECCCCCCC >Mature Secondary Structure ANSFDFELTATDQASASIQRIDEAVKNLLPDLDRTRDGLKLGGQESAEGLDDLNDRLKG CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCCCCHHCHHHHHHHHHHH MGQLAREGVQFVGDLVPPLKMVGEIGSAALKFGAVGGIAYTAVKAVQGLKSVAEAAYSLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH TAAKNAGMSVDDFSRLAGAMQILGIDGSSAQKSVEGLYKTLNDPLWARNDTTQALLVQNG HHHHHCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC IQIERNKDGTANVLKTMENIAKVFPSIAPHMQKTLADALGLDANTLSLLREGTRFKELLT EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH KADKIGLTVDPETNAQLVELNAQLNEASAVLDGLFIKAKTWGAQKLLTGDASFDPAIAVA HHHHCCEEECCCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCHHEEECCCCCCCHHHHH GGLVGLSFASVSNAPAIAAFENSKKYIGDDENSFAHGDKQKDILHRARVDDKFKDTLSFK HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC EKTYLTLGYPDKDFTQKLNDQYGEAWEEQEKKRLEAEKKKLAAPDKTPYSLTSSALTAPK CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC SGQDALGVRNNNPGNLRVAPNSTGKNGGFSTFANPQEGIAALARQLQLYGDRGNNTLSGI CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH LHTYAPSTENNTQGYINAVSGVTGANPYERLNLHSPEVLKKLVTSIIGHENGYQPYSSGD HHHCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC IDDGINASINDDRWKGLRNPNILLSQRQSLNSDNEEPNATTGDITTNNRPSILTPQPSNG CCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC HVITDINQGVGVEKSEVEITLINERTGERQKITAARGAKVSTSMNYAG CEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA