| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025056
Identifier: 170025056
GI number: 170025056
Start: 3116101
End: 3116262
Strand: Reverse
Name: 170025056
Synonym: YPK_2832
Alternate gene names: NA
Gene position: 3116262-3116101 (Counterclockwise)
Preceding gene: 170025058
Following gene: 170025051
Centisome position: 66.45
GC content: 38.27
Gene sequence:
>162_bases ATGTACTGTGTGCAGATGTACTGTGTGCAGATGTATTGTGTACAGATGTATTGTGTACAGATCGATTGTGTACAGATCAA TTGTACACAACCCCTGATTTTCGATTTCCGGCGCTTATTGTGTTTTTATGCGATTAAAATTTGTACTGAAAACCCACGGT AA
Upstream 100 bases:
>100_bases AAAAATATGAGTAAAGTTTAAAAAAATAGTAATGTTTATTGCGTAAATGAGTGCCTATCAGTTTACCAATGGGGTACATA TATAGCTGAGCTGTGTGCAG
Downstream 100 bases:
>100_bases GGGTTTGGCTTTGATACTCAATACCTGATTTACTACTGCCAACATTCCCGGTGGCGTAGTTGAGCGTTTGTGTCTCTCCT CGCCCTTCAGAATATTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MYCVQMYCVQMYCVQMYCVQIDCVQINCTQPLIFDFRRLLCFYAIKICTENPR
Sequences:
>Translated_53_residues MYCVQMYCVQMYCVQMYCVQIDCVQINCTQPLIFDFRRLLCFYAIKICTENPR >Mature_53_residues MYCVQMYCVQMYCVQMYCVQIDCVQINCTQPLIFDFRRLLCFYAIKICTENPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6447; Mature: 6447
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
15.1 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 22.6 %Cys+Met (Translated Protein) 15.1 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 22.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCVQMYCVQMYCVQMYCVQIDCVQINCTQPLIFDFRRLLCFYAIKICTENPR CHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYCVQMYCVQMYCVQMYCVQIDCVQINCTQPLIFDFRRLLCFYAIKICTENPR CHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA