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The map label for this gene is ychE [H]

Identifier: 170024306

GI number: 170024306

Start: 2299467

End: 2300111

Strand: Reverse

Name: ychE [H]

Synonym: YPK_2071

Alternate gene names: 170024306

Gene position: 2300111-2299467 (Counterclockwise)

Preceding gene: 170024308

Following gene: 170024305

Centisome position: 49.05

GC content: 45.43

Gene sequence:

>645_bases
GTGAGTCAATCACTGTTGGACCTTTCAGGTTACATCAAGTTTTTTGTTGGCTTATTTGCACTGGTTAACCCAGTAGGCAT
ATTGCCGGTCTTTATTAGTATGACAAGCTATCAGGCTGCTGCTGGGCGAGATAAAACGAATCTAACGGCGAACTTATCAG
TAGCCATAATTTTGTGGATCTCCTTGTTCCTTGGGGATGCCATTCTGACAATTTTTGGTATTTCTATTGATTCATTCCGG
ATTGCTGGCGGAATTCTGGTCGTCAGTATTGCGATGTCGATGATCAGCGGTAAGCTTGGCGAGGATAAGCAAAACAAGCA
GGAAAAAACTGAAACAGCGGTTCGGGAGAGTATTGGTGTTGTCCCATTGGCACTGCCTTTAATGGCTGGACCAGGAGCAA
TCAGCTCTACCATAGTCTGGAGCTCCCGTTACCATAGCTGGCAGAATTTATTGGGGCTGACTGCGGCTATAGCACTGTTT
GCTTTCTGTTGTTGGTTGCTGTTTCGTGCCGCTCCATTGCTTGTTCGTCTGCTGGGGCAGACAGGTATTAACGTCATAAC
ACGAATTATGGGGTTATTGCTGATGGCATTGGGCATTGAGTTTATTGTCACCGGTATCAAAGCTATTTTCCCCGGATTAC
TTTAA

Upstream 100 bases:

>100_bases
AGAGATATTCGGGTTTAACCAAAGAGAGAGTGTGCGGGTACATTAGTTATAATGCACTGTTATCGGTGATATTTTTATTA
GCAATTCTGTGGAGTGACGT

Downstream 100 bases:

>100_bases
ATCACACCATTCAGAATTTTCGAGAGGCCACTGAACTATTCTTGGTGGCCTTCTCCTTTTTTTCCGCTTTGCATTTCTAC
ATTTAAGCATTAATTTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSQSLLDLSGYIKFFVGLFALVNPVGILPVFISMTSYQAAAGRDKTNLTANLSVAIILWISLFLGDAILTIFGISIDSFR
IAGGILVVSIAMSMISGKLGEDKQNKQEKTETAVRESIGVVPLALPLMAGPGAISSTIVWSSRYHSWQNLLGLTAAIALF
AFCCWLLFRAAPLLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL

Sequences:

>Translated_214_residues
MSQSLLDLSGYIKFFVGLFALVNPVGILPVFISMTSYQAAAGRDKTNLTANLSVAIILWISLFLGDAILTIFGISIDSFR
IAGGILVVSIAMSMISGKLGEDKQNKQEKTETAVRESIGVVPLALPLMAGPGAISSTIVWSSRYHSWQNLLGLTAAIALF
AFCCWLLFRAAPLLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL
>Mature_213_residues
SQSLLDLSGYIKFFVGLFALVNPVGILPVFISMTSYQAAAGRDKTNLTANLSVAIILWISLFLGDAILTIFGISIDSFRI
AGGILVVSIAMSMISGKLGEDKQNKQEKTETAVRESIGVVPLALPLMAGPGAISSTIVWSSRYHSWQNLLGLTAAIALFA
FCCWLLFRAAPLLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=214, Percent_Identity=84.1121495327103, Blast_Score=355, Evalue=2e-99,
Organism=Escherichia coli, GI1787809, Length=197, Percent_Identity=31.9796954314721, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789842, Length=191, Percent_Identity=27.7486910994764, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22890; Mature: 22759

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSLLDLSGYIKFFVGLFALVNPVGILPVFISMTSYQAAAGRDKTNLTANLSVAIILWI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SLFLGDAILTIFGISIDSFRIAGGILVVSIAMSMISGKLGEDKQNKQEKTETAVRESIGV
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
VPLALPLMAGPGAISSTIVWSSRYHSWQNLLGLTAAIALFAFCCWLLFRAAPLLVRLLGQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQSLLDLSGYIKFFVGLFALVNPVGILPVFISMTSYQAAAGRDKTNLTANLSVAIILWI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SLFLGDAILTIFGISIDSFRIAGGILVVSIAMSMISGKLGEDKQNKQEKTETAVRESIGV
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
VPLALPLMAGPGAISSTIVWSSRYHSWQNLLGLTAAIALFAFCCWLLFRAAPLLVRLLGQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]