| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170023711
Identifier: 170023711
GI number: 170023711
Start: 1623607
End: 1624638
Strand: Reverse
Name: 170023711
Synonym: YPK_1470
Alternate gene names: NA
Gene position: 1624638-1623607 (Counterclockwise)
Preceding gene: 170023712
Following gene: 170023710
Centisome position: 34.64
GC content: 46.12
Gene sequence:
>1032_bases ATGACAAGGAAGCTTTTTATATTGGTATTCGGTGCGGCCATAAGTGGACAAGTAAACGCTAATTGTACACTCCACTTGGT GAGCAATTCAGAAAGCGTCGCTGGCGTGATGCCACTGACATTCCCGATTAGCTCTTTTACTTTCACTATTGATGCCGATG CACCGAATGACTCTACAGTGCCTATCCTAGAAAAAGTGGCACAACCACAAGGCTTGGCAGTGATTTATCACTGCACCTCG GTCGATCGTTACGGCAAGAATGTGGGGCCGATATTAGGCCAGGATTTAGGTAATGGGCTTTTTGCAACGAATATCGATGG TATTGCCATCAAACCTGCATGGAATAACGGCGCAGCCTATGGCTATTTCAACTCATCGGGCATCATGCCTGCCTTTGAGC GTGAGGGCGTTCCGACCGAAGAAGGCTTTTGGACATATCCTGGAACTTCACACTTCAGATTCGAACTCTATAAAATTAAA GATACGTTGAATTTAACTGACACCAACGGCGAACGTGTTCTGCCGGGTGGCACAATAGCCTATACCTGGGCGACGAATAA TAGTTTGGCAAACTACGCACAAAGGCTGGAAATCGGTGAAATAAAAGTCATCAGCACCCCGAGTTGTACCTTTGACGGCC CCCAGAAGGTTAACTTTGGTCTTGTCACGTCAAGCAACTTGAATAATGGGGGTATCGAGCGTGATCTCGATTTTAATATC ACCTGTAAAACGGATTATGGCCACTACTCAGCAACCGCGGCTATCTCCACGCAAACGCCATCTGACGATAATAATTACAT CAAGGTAAAAGACAACCAAAACCAAGAAGACCGGTTGCTTATCAAAATCAGCGATACCAACGGCCAACAGATGAAAGTGA ATGGCAGCACGACAGAACAACAAGTCAATATTGCCAGCGGTGTACCTGCAGGGTTCAGATGGAAAGCAAAACTGGAAGCC GCCCCAGCAGCGAATAAACCGGCTATTGGTGATTTTTCCGCGATGGCAGAAATTATTCTGCAGATAAAATAA
Upstream 100 bases:
>100_bases TTTTTCAGAAAAAACTATCGGCAAAAGCTTCGGCGAATTGCTGCAGTTCATTCCTCAGGAACTGATTTCGAAACTCAATG AAGGACAGGAGTAATTTGCC
Downstream 100 bases:
>100_bases CGCCATTCGGCAGCTCGTTAAATTTTACACGGATTATATATGCAGTCTGTACCCTCTATTTTTGTGAGTATTGCAAGTTA TCGGGATCCTGAGTTGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTRKLFILVFGAAISGQVNANCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTVPILEKVAQPQGLAVIYHCTS VDRYGKNVGPILGQDLGNGLFATNIDGIAIKPAWNNGAAYGYFNSSGIMPAFEREGVPTEEGFWTYPGTSHFRFELYKIK DTLNLTDTNGERVLPGGTIAYTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVNFGLVTSSNLNNGGIERDLDFNI TCKTDYGHYSATAAISTQTPSDDNNYIKVKDNQNQEDRLLIKISDTNGQQMKVNGSTTEQQVNIASGVPAGFRWKAKLEA APAANKPAIGDFSAMAEIILQIK
Sequences:
>Translated_343_residues MTRKLFILVFGAAISGQVNANCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTVPILEKVAQPQGLAVIYHCTS VDRYGKNVGPILGQDLGNGLFATNIDGIAIKPAWNNGAAYGYFNSSGIMPAFEREGVPTEEGFWTYPGTSHFRFELYKIK DTLNLTDTNGERVLPGGTIAYTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVNFGLVTSSNLNNGGIERDLDFNI TCKTDYGHYSATAAISTQTPSDDNNYIKVKDNQNQEDRLLIKISDTNGQQMKVNGSTTEQQVNIASGVPAGFRWKAKLEA APAANKPAIGDFSAMAEIILQIK >Mature_342_residues TRKLFILVFGAAISGQVNANCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTVPILEKVAQPQGLAVIYHCTSV DRYGKNVGPILGQDLGNGLFATNIDGIAIKPAWNNGAAYGYFNSSGIMPAFEREGVPTEEGFWTYPGTSHFRFELYKIKD TLNLTDTNGERVLPGGTIAYTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVNFGLVTSSNLNNGGIERDLDFNIT CKTDYGHYSATAAISTQTPSDDNNYIKVKDNQNQEDRLLIKISDTNGQQMKVNGSTTEQQVNIASGVPAGFRWKAKLEAA PAANKPAIGDFSAMAEIILQIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37053; Mature: 36922
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKLFILVFGAAISGQVNANCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTV CCCEEEEEEEECEECCEECCCEEEEEEECCCCEEEEEEEEEECCEEEEEEECCCCCCCCC PILEKVAQPQGLAVIYHCTSVDRYGKNVGPILGQDLGNGLFATNIDGIAIKPAWNNGAAY HHHHHHCCCCCEEEEEEECCHHHCCCCCCCHHHHHHCCCEEEECCCCEEEEECCCCCEEE GYFNSSGIMPAFEREGVPTEEGFWTYPGTSHFRFELYKIKDTLNLTDTNGERVLPGGTIA EEECCCCCCCCHHHCCCCCCCCEEECCCCCCEEEEEEEEEEEEEEECCCCCEECCCCEEE YTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVNFGLVTSSNLNNGGIERDLDFNI EEEECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEE TCKTDYGHYSATAAISTQTPSDDNNYIKVKDNQNQEDRLLIKISDTNGQQMKVNGSTTEQ EEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCE QVNIASGVPAGFRWKAKLEAAPAANKPAIGDFSAMAEIILQIK EEEECCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHEEEECC >Mature Secondary Structure TRKLFILVFGAAISGQVNANCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTV CCEEEEEEEECEECCEECCCEEEEEEECCCCEEEEEEEEEECCEEEEEEECCCCCCCCC PILEKVAQPQGLAVIYHCTSVDRYGKNVGPILGQDLGNGLFATNIDGIAIKPAWNNGAAY HHHHHHCCCCCEEEEEEECCHHHCCCCCCCHHHHHHCCCEEEECCCCEEEEECCCCCEEE GYFNSSGIMPAFEREGVPTEEGFWTYPGTSHFRFELYKIKDTLNLTDTNGERVLPGGTIA EEECCCCCCCCHHHCCCCCCCCEEECCCCCCEEEEEEEEEEEEEEECCCCCEECCCCEEE YTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVNFGLVTSSNLNNGGIERDLDFNI EEEECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEE TCKTDYGHYSATAAISTQTPSDDNNYIKVKDNQNQEDRLLIKISDTNGQQMKVNGSTTEQ EEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCE QVNIASGVPAGFRWKAKLEAAPAANKPAIGDFSAMAEIILQIK EEEECCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA