| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023710
Identifier: 170023710
GI number: 170023710
Start: 1622230
End: 1623567
Strand: Reverse
Name: 170023710
Synonym: YPK_1469
Alternate gene names: NA
Gene position: 1623567-1622230 (Counterclockwise)
Preceding gene: 170023711
Following gene: 170023709
Centisome position: 34.62
GC content: 47.53
Gene sequence:
>1338_bases ATGCAGTCTGTACCCTCTATTTTTGTGAGTATTGCAAGTTATCGGGATCCTGAGTTGATCCCCACCTTGCATGACATGAT AAATACCGCAGAGCGCCCCGAAAATCTTAATATTGCGATTTTTTGGCAAAATGATAATGACATTAATACCTTCTTAAATC AGGGAATGCAGTTGATTGAGCGTAAAACTCATCAGGGCTATCCACTGTACCAGTTGGAATACAACCGGGCGCGGGTGTCG GTACTCAGTGTGCATTACTATGAAAGTAGAGGGGCATGCTGGGCCAGGCACATGGCCGAAACCTTGTTCCAGGATGAAGC ATTCTTTTTGCAGATCGATTCTCACTGTCGTTTCATTCCACACTGGGATCACGAAATGATCGCGATGTTGGATAGTCTGC GCGCCGAAAGCCCTAAGCCTATCCTCTCCAGCTACCCTCCTGCGTATGAACCCGGCGAGAATGAGATTCGGAAAGATTAT GTCAGCCGCATGATATTTAATCTCTTTACGCAGGAAGGTATCGTGCAAATGCTATCAACCACCATCACCGAAACGGCCCC CGTGCGTTGTGGTTATCTGGCGGGGGGGTTTATTTTCAGTGACGGTAGTTTTGCCAGAGAGGTGCCCAACGATCCCAATA TTTTCTTTATTGGCGAAGAAATTGCCATGGCAGCGCGTGCCTTTACCCATGGCTATGACATTTACGCCCCACACAAAATT CTGCTCTGGCATTTCTATACCCGCGCGGAGCACAGTAAGGTTTGGTCAGATCACAATAATGAAGCCAAAGAAACGGGTGC AGTAGATATGGCCTGGTGGGAGCGCGATAAAATTGCGAAAGACCGGATTTGTATCCTGTTAGATGGCGATAAAGATCACC GCGTACTCGCCCCCTATACCTTGGGTACCCAGCGTTCATTGTCGGAATTCGAATACCGTCTGGGCATCAATATTAAAAAC CGAGCGGTGCATCCTGATGCTGCGGGTGAAAAAAAAGTGAGCTTCTTCACTGATCTTCCCACATCCCATGAAGACTGGCT TTCCTCCCTGATTAGCGTAAATAAAAAAACGCTAAAAGTGGAAAAGAAAGAGGTGGACTTCACACGAGAGGATGTGGAGT GGTGGCACATTGGCGTTTATAACCCGCAAAATGTCGCCGTTATGGTGGAAAAAGTTGACCCGCAGAACCTGAGCAAAACG GTTACCCCCGTTGACGAAGCTACCTTTGAGTTGAAATTGGCCTTTAATACTCAAACCCATCCGAATGCACAAACAATTAG AATATGTCCTTACATGCGAACGCAGGGGTGGGGAGATGTCGTGGAGAAACCCTGGTGA
Upstream 100 bases:
>100_bases GAATAAACCGGCTATTGGTGATTTTTCCGCGATGGCAGAAATTATTCTGCAGATAAAATAACGCCATTCGGCAGCTCGTT AAATTTTACACGGATTATAT
Downstream 100 bases:
>100_bases GCAGCGCAGATATTTTTAAAAAGATTTTAAGTATTGACACCTTATTATCATTCGATGGTGTTATCCCTTCTTTATCCGAG TTTCAGCTAAAGCTGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERKTHQGYPLYQLEYNRARVS VLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDY VSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLAPYTLGTQRSLSEFEYRLGINIKN RAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKT VTPVDEATFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW
Sequences:
>Translated_445_residues MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERKTHQGYPLYQLEYNRARVS VLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDY VSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLAPYTLGTQRSLSEFEYRLGINIKN RAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKT VTPVDEATFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW >Mature_445_residues MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERKTHQGYPLYQLEYNRARVS VLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDY VSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLAPYTLGTQRSLSEFEYRLGINIKN RAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKT VTPVDEATFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51459; Mature: 51459
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIE CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RKTHQGYPLYQLEYNRARVSVLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIP HHHCCCCCEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC HWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDYVSRMIFNLFTQEGIVQMLST CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI HHHCCCCCEEEEEECCEEECCCCHHHCCCCCCCEEEECHHHHHHHHHHHCCCCEECCCEE LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLAPYT EEEEEHHHHHHHHHHCCCCCCHHHCCCEEEEHHCCCCCCCCCEEEEEECCCCCEEEECEE LGTQRSLSEFEYRLGINIKNRAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKV CCCCHHHHHHHEEECCEECCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHEEE EKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKTVTPVDEATFELKLAFNTQTH EHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCC PNAQTIRICPYMRTQGWGDVVEKPW CCCCEEEEECCCCCCCCCHHHCCCC >Mature Secondary Structure MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIE CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RKTHQGYPLYQLEYNRARVSVLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIP HHHCCCCCEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC HWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDYVSRMIFNLFTQEGIVQMLST CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI HHHCCCCCEEEEEECCEEECCCCHHHCCCCCCCEEEECHHHHHHHHHHHCCCCEECCCEE LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLAPYT EEEEEHHHHHHHHHHCCCCCCHHHCCCEEEEHHCCCCCCCCCEEEEEECCCCCEEEECEE LGTQRSLSEFEYRLGINIKNRAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKV CCCCHHHHHHHEEECCEECCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHEEE EKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKTVTPVDEATFELKLAFNTQTH EHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCC PNAQTIRICPYMRTQGWGDVVEKPW CCCCEEEEECCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA