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The map label for this gene is 170023712

Identifier: 170023712

GI number: 170023712

Start: 1624645

End: 1625838

Strand: Reverse

Name: 170023712

Synonym: YPK_1471

Alternate gene names: NA

Gene position: 1625838-1624645 (Counterclockwise)

Preceding gene: 170023713

Following gene: 170023711

Centisome position: 34.67

GC content: 51.17

Gene sequence:

>1194_bases
ATGAGTGAACAGAGTATCGCTGAACGTGCCGGTTATTATCAAAGCATGATGCAGCCCATTCCAGGTGACTTTCCTTGTGG
CAAAAATCTGGAATATGACCCGGCATTTATTATGCTACAGACAAAATTGCAGCCTAAGCAGGCCGCTGAATACGGCAATT
TTGTTGAGGTCGCTGAACCCAATAACTGGACAGATATCGAGCGTAAATGCCTTGAACTCCTGAATAATTCTCGGGATATT
CGGCTGTTTATTATTCTGATGCGCTGCCGGATGCGTCAGGTCGGTGTGGGCGCGTTGCAAGAAGGGCTGGAAGCCATACT
TTGGTGCCTCGACACTTGGCCTGATCAGCTACATCCTCAGCTGTTTGATGAAGGGGAATTTGAACCTTTAATGCGCGGTA
ATGCTTTTGCTGAACTGGAAGACATTGATGGTTTTATCGCCGACTTCCGTAATCAGCAGTTACCCAAAGCCGCTGGCGTG
CAACTTTCCATCAAAGAGTTTGAAAAGGCACACTCCGTTCCTCGAGAAGAAGGGGCATTGGACGAAGGGACTCTGGAAGC
CGTCAAGCAAGAGTGGCAGAACCGATCAGATCACACCATTCTTTCACTCCAGCACGCTTATGCCTTGTTGCAAGGATTAG
CCACGCGCCTCAACAACTCCCTCGGTGAAGACACACCTGATTTTGTCAGAATGACCTCGGTGTTACGCCACTTTGATGCC
GCGATAACCCCGATAGCGCCTATCGTGGTGCCAGAACCTATTGAGACCCCAGACGTTGTCGAGCTCTATCCGGTCGCCAC
AGCGATGCTAGCAAGCACAGAAATGCCAGTGACCGCCGAGGTACAGACGGTTGCAGAGACACAAATGGCCATACCCATTG
AGGCTCCCCAACAGCGTCAAGCGGTGGTAACCCCATCCCCGCCGTTGCAGCCGTTACAGTTGCAATCGGCACAGTTGCAA
CCTGTACCGATACAGTCGCCGCCGGTGCCTGTCCAACAGCAGGGGATCCAAAACAGGGCTGATGCGTTAGCCCGGCTTAT
AGAGGTGCGAGAGTGGTTTACCGCCATGGAACCGAGTAGCCCGGTCATTGCCTTACTGGCTTTTTCAGAAAAAACTATCG
GCAAAAGCTTCGGCGAATTGCTGCAGTTCATTCCTCAGGAACTGATTTCGAAACTCAATGAAGGACAGGAGTAA

Upstream 100 bases:

>100_bases
AATTAATGCATCGCTCTTAATCAATAATCTTCATGGCCAATGTGCTGGCAGCAGAAAAAACAGACAACGACGTCCACCCA
TGGCGTTAAAAGGAACAAAC

Downstream 100 bases:

>100_bases
TTTGCCATGACAAGGAAGCTTTTTATATTGGTATTCGGTGCGGCCATAAGTGGACAAGTAAACGCTAATTGTACACTCCA
CTTGGTGAGCAATTCAGAAA

Product: ImpA domain-containing protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Cytoplasmic Protein; ImpA Family Type VI Secretion-Associated Protein; ImpA-Like; Replication/Virulence Associated Protein; Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Family Protein; ImpA Domain Protein; Type VI Secretion System Core Protein; ImpA-Related N-Terminal Domain-Containing; Conserved Protein; Type VI Secretion System Protein ImpA; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEPNNWTDIERKCLELLNNSRDI
RLFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQLFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGV
QLSIKEFEKAHSVPREEGALDEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDA
AITPIAPIVVPEPIETPDVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQAVVTPSPPLQPLQLQSAQLQ
PVPIQSPPVPVQQQGIQNRADALARLIEVREWFTAMEPSSPVIALLAFSEKTIGKSFGELLQFIPQELISKLNEGQE

Sequences:

>Translated_397_residues
MSEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEPNNWTDIERKCLELLNNSRDI
RLFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQLFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGV
QLSIKEFEKAHSVPREEGALDEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDA
AITPIAPIVVPEPIETPDVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQAVVTPSPPLQPLQLQSAQLQ
PVPIQSPPVPVQQQGIQNRADALARLIEVREWFTAMEPSSPVIALLAFSEKTIGKSFGELLQFIPQELISKLNEGQE
>Mature_396_residues
SEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEPNNWTDIERKCLELLNNSRDIR
LFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQLFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGVQ
LSIKEFEKAHSVPREEGALDEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDAA
ITPIAPIVVPEPIETPDVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQAVVTPSPPLQPLQLQSAQLQP
VPIQSPPVPVQQQGIQNRADALARLIEVREWFTAMEPSSPVIALLAFSEKTIGKSFGELLQFIPQELISKLNEGQE

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44362; Mature: 44231

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCEEEECCC
NNWTDIERKCLELLNNSRDIRLFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHCCHH
LFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGVQLSIKEFEKAHSVPREEGAL
HCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHCCEEEHHHHHHHHCCCCCCCCC
DEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDA
CHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AITPIAPIVVPEPIETPDVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQ
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC
AVVTPSPPLQPLQLQSAQLQPVPIQSPPVPVQQQGIQNRADALARLIEVREWFTAMEPSS
EEECCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVIALLAFSEKTIGKSFGELLQFIPQELISKLNEGQE
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEP
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCEEEECCC
NNWTDIERKCLELLNNSRDIRLFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHCCHH
LFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGVQLSIKEFEKAHSVPREEGAL
HCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHCCEEEHHHHHHHHCCCCCCCCC
DEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDA
CHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AITPIAPIVVPEPIETPDVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQ
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC
AVVTPSPPLQPLQLQSAQLQPVPIQSPPVPVQQQGIQNRADALARLIEVREWFTAMEPSS
EEECCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVIALLAFSEKTIGKSFGELLQFIPQELISKLNEGQE
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA