| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yhdL [H]
Identifier: 170022572
GI number: 170022572
Start: 333984
End: 334184
Strand: Direct
Name: yhdL [H]
Synonym: YPK_0311
Alternate gene names: 170022572
Gene position: 333984-334184 (Clockwise)
Preceding gene: 170022571
Following gene: 170022578
Centisome position: 7.12
GC content: 40.3
Gene sequence:
>201_bases ATGACAACATATCGCCATACCAAGGGAAAAATTAAAGATAATGCACTGGAAGCTCTACTCCACGACCCACTATTCAGACA GCGTATTGAGAAAAATAGTAAGGGCAAAGGAAGTTATCAGCGCAAAGAGAAATATGCAAAAGGTAGTAACTGGGAGGCCA GTGGTAAGCAATCAATAGATTTTTTACTACTGGCCTTCTGA
Upstream 100 bases:
>100_bases AATTAAGGTATGAATTTCTCTACAGAGGGTTTAAATCGGCAGAGGACCACCGTATTATGTTCAGGATTTATCCATAGCGT CATTACTACGAGGTAGCACC
Downstream 100 bases:
>100_bases TTTAAAAGAAATAAAAAGTTATCTTCTTGGACTTAATCCAAATACCCGCTTTTGTGTTGCTGTTTAGGCCAACTCATTCC GGTAGCTCTTAAATTTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MTTYRHTKGKIKDNALEALLHDPLFRQRIEKNSKGKGSYQRKEKYAKGSNWEASGKQSIDFLLLAF
Sequences:
>Translated_66_residues MTTYRHTKGKIKDNALEALLHDPLFRQRIEKNSKGKGSYQRKEKYAKGSNWEASGKQSIDFLLLAF >Mature_65_residues TTYRHTKGKIKDNALEALLHDPLFRQRIEKNSKGKGSYQRKEKYAKGSNWEASGKQSIDFLLLAF
Specific function: Unknown
COG id: COG3036
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0235 [H]
Homologues:
Organism=Escherichia coli, GI87082241, Length=62, Percent_Identity=69.3548387096774, Blast_Score=94, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005589 [H]
Pfam domain/function: PF03889 DUF331 [H]
EC number: NA
Molecular weight: Translated: 7644; Mature: 7513
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYRHTKGKIKDNALEALLHDPLFRQRIEKNSKGKGSYQRKEKYAKGSNWEASGKQSID CCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC FLLLAF EEEEEC >Mature Secondary Structure TTYRHTKGKIKDNALEALLHDPLFRQRIEKNSKGKGSYQRKEKYAKGSNWEASGKQSID CCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC FLLLAF EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8063098; 9278503 [H]