| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169629590
Identifier: 169629590
GI number: 169629590
Start: 2558848
End: 2559414
Strand: Reverse
Name: 169629590
Synonym: MAB_2504c
Alternate gene names: NA
Gene position: 2559414-2558848 (Counterclockwise)
Preceding gene: 169629591
Following gene: 169629589
Centisome position: 50.51
GC content: 61.9
Gene sequence:
>567_bases ATGGCGAGTCTGCCCACTCCTGAACTCGCGACAGCCAGCGATCTCGTGGAGTTCCTCGAAGACCAGCATGTCGCCATTCG GACGTTGTTCGACGCCGCGCTGTCACCTGAAAAGGGCATCGACAGCGGGAGTTTCACTCGATTGCGTGGCCTGCTCGCGG TGCACGAGACTGTTGAAGCGATGGTTGTGCACCCGTGGTCACGTGGAATCTCTGAGGCCGGACGGACGGTTGCGAACACA CGTTTGGCTGAAGAACTGGCGCTGACGACCGACCTTGAACAGTTGGAGGCCACGGCGGTGGGGAGTCCGGAATTCATCGT GGGTCTTGCGGCGTTGCGATCGGCGACGCTGGAGCACTGCAGGCTCGAAGAGGAGGAGGAATTTCCCATGCTCTCAGGAG AACTCGGGCCCGTCGACAGACGCCGAGCGGGTCTTGCCGTCGGCATGTCCGAATGGTTCGCGCCCGCTCCCGAGCGTTCA CCCGCTGAATCCACGATCGCCAGTCCCACGCATGGCCCTTACGGGGAAATGGCGGCCAGGGTAAGAGATATTCTCGCCGC GGTTTGA
Upstream 100 bases:
>100_bases TGATCCCGTGATCGCCGACTGGGTATGGGAACACGAACTCGGTTCCCTGAGTGGCAGTCGCTGAGAACATCCGCAGCAAC GTGAGAGGAGGTCGATCTCG
Downstream 100 bases:
>100_bases CGAGCGGGCGACCGGGTAGGTCTGATGGGTGAATTCCATTTGGCTGGAGGGCCGTTCGGGCTTGGTAGCGCGTGTGCCGC TTGCGCCCGATGACACCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MASLPTPELATASDLVEFLEDQHVAIRTLFDAALSPEKGIDSGSFTRLRGLLAVHETVEAMVVHPWSRGISEAGRTVANT RLAEELALTTDLEQLEATAVGSPEFIVGLAALRSATLEHCRLEEEEEFPMLSGELGPVDRRRAGLAVGMSEWFAPAPERS PAESTIASPTHGPYGEMAARVRDILAAV
Sequences:
>Translated_188_residues MASLPTPELATASDLVEFLEDQHVAIRTLFDAALSPEKGIDSGSFTRLRGLLAVHETVEAMVVHPWSRGISEAGRTVANT RLAEELALTTDLEQLEATAVGSPEFIVGLAALRSATLEHCRLEEEEEFPMLSGELGPVDRRRAGLAVGMSEWFAPAPERS PAESTIASPTHGPYGEMAARVRDILAAV >Mature_187_residues ASLPTPELATASDLVEFLEDQHVAIRTLFDAALSPEKGIDSGSFTRLRGLLAVHETVEAMVVHPWSRGISEAGRTVANTR LAEELALTTDLEQLEATAVGSPEFIVGLAALRSATLEHCRLEEEEEFPMLSGELGPVDRRRAGLAVGMSEWFAPAPERSP AESTIASPTHGPYGEMAARVRDILAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20159; Mature: 20028
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLPTPELATASDLVEFLEDQHVAIRTLFDAALSPEKGIDSGSFTRLRGLLAVHETVEA CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH MVVHPWSRGISEAGRTVANTRLAEELALTTDLEQLEATAVGSPEFIVGLAALRSATLEHC HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RLEEEEEFPMLSGELGPVDRRRAGLAVGMSEWFAPAPERSPAESTIASPTHGPYGEMAAR CCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHH VRDILAAV HHHHHHCC >Mature Secondary Structure ASLPTPELATASDLVEFLEDQHVAIRTLFDAALSPEKGIDSGSFTRLRGLLAVHETVEA CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH MVVHPWSRGISEAGRTVANTRLAEELALTTDLEQLEATAVGSPEFIVGLAALRSATLEHC HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RLEEEEEFPMLSGELGPVDRRRAGLAVGMSEWFAPAPERSPAESTIASPTHGPYGEMAAR CCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHH VRDILAAV HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA