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The map label for this gene is yhfW [H]

Identifier: 169629589

GI number: 169629589

Start: 2557371

End: 2558819

Strand: Reverse

Name: yhfW [H]

Synonym: MAB_2503c

Alternate gene names: 169629589

Gene position: 2558819-2557371 (Counterclockwise)

Preceding gene: 169629590

Following gene: 169629585

Centisome position: 50.5

GC content: 63.84

Gene sequence:

>1449_bases
GTGAATTCCATTTGGCTGGAGGGCCGTTCGGGCTTGGTAGCGCGTGTGCCGCTTGCGCCCGATGACACCACACAGACCGT
CGACATCGCGGTTATCGGAGCGGGCATCACTGGCCTCACCACAGCACTTCTCCTTGCTCGCGCAGGCCTTGAGGTGGTGG
TGCTTGAGGCACGGAGCGCCGGAGATGGGACGACGGGAAACTCCACTGGGAAAATCAGTGCCCTGCACGGAACCAAGCTG
TCTCGTATCGCGCACAGGCATGGCCATGCCGTCGCACGCGCATACACCACGGGCAACACAGAGGGGCGCGACTGGCTGCT
GCGCTATTGCGAGGAACACGGCGTACCGACACAAACCGAGGATGCCTACACCTATGCGCAAACCCGTGAGGGCACCGCCG
GCGCTCGGGATGAATGGAATGCTTGTCTGCAGGCCGGGCTGCCCGTCAGGTGGGAGACCACAGCCGACACTCCCTTCCCC
TACTACGGCGGTGTTCGCCTGCCCGACCAGGCGCAGTTCAACCCCGCACAACTCGTGGAAAGCATGGTCGCGCAGCTCGA
GGACCACGGCGCCCATTTCTTCAGCGGCATGCGGGTCCGGTCCATATCGGGGCGGGGGCCGCTGCGAATCAAGGGCGACT
ACGCACATGACGCGGGCGCAGGGGAATTCGCACTCGAGGCACAACGCTGTGTGCTGGCGACCGGCACGCCGATCCTGGAT
CGCGGCGGATTCTTCGCAAAACTGACCGCAAACCGATCCTATTGCATGTCATTCGACGTTCCGGGGCCCATTACCCGGGC
GATGTATCTGTCGGTAGACGCGCCGCTGCGATCCGTGCGCTACGCACCCTCATCGACAGGTGACCGATTGGTCGTGGGCG
GGGCGGGCCATGTGGTGGGCCATCCGGCACATGCCCGGGAGGCGTTGCGGGAACTGGCCGGCTGGGCTCAAACCCACTAT
CCGGGCGCCACCCGGACACACAGCTGGGCTGCACAGGACTATGCGACCATCAGCGAACTTCCTTATGCGGGACCGCTGCT
GCCCGGCGGGAAGAGAATTTACCTGGCCACTGGATATGACAAGTGGGGCATGACCAATGGCATCGCAGCTTCCCTGGCAC
TGTCCTCACAGATTCTCGGAGGTCGGATGGATTGGGCGAACGCATTCGCAAGCTGGAGTGCACTAGACCTGCGAGCCATC
CCGGCGGCGATACGCCTGGGGAGCCGGGTTGCCCGTGACTTCGCTTCCGGCTGGGCGACAGCCATGCTCACCTCTCGTCC
CGAACATGCGCCGGTGTGTACTCATCTAGGCGGAATTACCACATGGAATGACGCAGAGGATATCTGGGAGTGCCCATTAC
ACGGCTCCTGCTTCGATTCGGGCGGTTCGGTTCTCTGGGGGCCCGCCACCGAGCCACTCGATCGACTTCCGGCCGACGGC
GCACGCTAG

Upstream 100 bases:

>100_bases
ATCGCCAGTCCCACGCATGGCCCTTACGGGGAAATGGCGGCCAGGGTAAGAGATATTCTCGCCGCGGTTTGACGAGCGGG
CGACCGGGTAGGTCTGATGG

Downstream 100 bases:

>100_bases
CAGGAACCCCTTTCACAGCCGCGCGGCACGCTGGATGAGGTGGCGGGTTGCCTTGTCGAGGATGTTTTGGGCCGCATCCG
GTTTCTTGCGTGCCGCCCGC

Product: putative iron-sulfur binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MNSIWLEGRSGLVARVPLAPDDTTQTVDIAVIGAGITGLTTALLLARAGLEVVVLEARSAGDGTTGNSTGKISALHGTKL
SRIAHRHGHAVARAYTTGNTEGRDWLLRYCEEHGVPTQTEDAYTYAQTREGTAGARDEWNACLQAGLPVRWETTADTPFP
YYGGVRLPDQAQFNPAQLVESMVAQLEDHGAHFFSGMRVRSISGRGPLRIKGDYAHDAGAGEFALEAQRCVLATGTPILD
RGGFFAKLTANRSYCMSFDVPGPITRAMYLSVDAPLRSVRYAPSSTGDRLVVGGAGHVVGHPAHAREALRELAGWAQTHY
PGATRTHSWAAQDYATISELPYAGPLLPGGKRIYLATGYDKWGMTNGIAASLALSSQILGGRMDWANAFASWSALDLRAI
PAAIRLGSRVARDFASGWATAMLTSRPEHAPVCTHLGGITTWNDAEDIWECPLHGSCFDSGGSVLWGPATEPLDRLPADG
AR

Sequences:

>Translated_482_residues
MNSIWLEGRSGLVARVPLAPDDTTQTVDIAVIGAGITGLTTALLLARAGLEVVVLEARSAGDGTTGNSTGKISALHGTKL
SRIAHRHGHAVARAYTTGNTEGRDWLLRYCEEHGVPTQTEDAYTYAQTREGTAGARDEWNACLQAGLPVRWETTADTPFP
YYGGVRLPDQAQFNPAQLVESMVAQLEDHGAHFFSGMRVRSISGRGPLRIKGDYAHDAGAGEFALEAQRCVLATGTPILD
RGGFFAKLTANRSYCMSFDVPGPITRAMYLSVDAPLRSVRYAPSSTGDRLVVGGAGHVVGHPAHAREALRELAGWAQTHY
PGATRTHSWAAQDYATISELPYAGPLLPGGKRIYLATGYDKWGMTNGIAASLALSSQILGGRMDWANAFASWSALDLRAI
PAAIRLGSRVARDFASGWATAMLTSRPEHAPVCTHLGGITTWNDAEDIWECPLHGSCFDSGGSVLWGPATEPLDRLPADG
AR
>Mature_482_residues
MNSIWLEGRSGLVARVPLAPDDTTQTVDIAVIGAGITGLTTALLLARAGLEVVVLEARSAGDGTTGNSTGKISALHGTKL
SRIAHRHGHAVARAYTTGNTEGRDWLLRYCEEHGVPTQTEDAYTYAQTREGTAGARDEWNACLQAGLPVRWETTADTPFP
YYGGVRLPDQAQFNPAQLVESMVAQLEDHGAHFFSGMRVRSISGRGPLRIKGDYAHDAGAGEFALEAQRCVLATGTPILD
RGGFFAKLTANRSYCMSFDVPGPITRAMYLSVDAPLRSVRYAPSSTGDRLVVGGAGHVVGHPAHAREALRELAGWAQTHY
PGATRTHSWAAQDYATISELPYAGPLLPGGKRIYLATGYDKWGMTNGIAASLALSSQILGGRMDWANAFASWSALDLRAI
PAAIRLGSRVARDFASGWATAMLTSRPEHAPVCTHLGGITTWNDAEDIWECPLHGSCFDSGGSVLWGPATEPLDRLPADG
AR

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 51418; Mature: 51418

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIWLEGRSGLVARVPLAPDDTTQTVDIAVIGAGITGLTTALLLARAGLEVVVLEARSA
CCCEEEECCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCC
GDGTTGNSTGKISALHGTKLSRIAHRHGHAVARAYTTGNTEGRDWLLRYCEEHGVPTQTE
CCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC
DAYTYAQTREGTAGARDEWNACLQAGLPVRWETTADTPFPYYGGVRLPDQAQFNPAQLVE
CCEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCHHHHHH
SMVAQLEDHGAHFFSGMRVRSISGRGPLRIKGDYAHDAGAGEFALEAQRCVLATGTPILD
HHHHHHHHCCHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCEEEECCEEEEECCCCEEE
RGGFFAKLTANRSYCMSFDVPGPITRAMYLSVDAPLRSVRYAPSSTGDRLVVGGAGHVVG
CCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCHHHEECCCCCCCCEEEECCCCCCCC
HPAHAREALRELAGWAQTHYPGATRTHSWAAQDYATISELPYAGPLLPGGKRIYLATGYD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
KWGMTNGIAASLALSSQILGGRMDWANAFASWSALDLRAIPAAIRLGSRVARDFASGWAT
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLTSRPEHAPVCTHLGGITTWNDAEDIWECPLHGSCFDSGGSVLWGPATEPLDRLPADG
HHHCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCHHHHCCCCC
AR
CC
>Mature Secondary Structure
MNSIWLEGRSGLVARVPLAPDDTTQTVDIAVIGAGITGLTTALLLARAGLEVVVLEARSA
CCCEEEECCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCC
GDGTTGNSTGKISALHGTKLSRIAHRHGHAVARAYTTGNTEGRDWLLRYCEEHGVPTQTE
CCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC
DAYTYAQTREGTAGARDEWNACLQAGLPVRWETTADTPFPYYGGVRLPDQAQFNPAQLVE
CCEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCHHHHHH
SMVAQLEDHGAHFFSGMRVRSISGRGPLRIKGDYAHDAGAGEFALEAQRCVLATGTPILD
HHHHHHHHCCHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCEEEECCEEEEECCCCEEE
RGGFFAKLTANRSYCMSFDVPGPITRAMYLSVDAPLRSVRYAPSSTGDRLVVGGAGHVVG
CCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCHHHEECCCCCCCCEEEECCCCCCCC
HPAHAREALRELAGWAQTHYPGATRTHSWAAQDYATISELPYAGPLLPGGKRIYLATGYD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
KWGMTNGIAASLALSSQILGGRMDWANAFASWSALDLRAIPAAIRLGSRVARDFASGWAT
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLTSRPEHAPVCTHLGGITTWNDAEDIWECPLHGSCFDSGGSVLWGPATEPLDRLPADG
HHHCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCHHHHCCCCC
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]