| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629591
Identifier: 169629591
GI number: 169629591
Start: 2559451
End: 2561871
Strand: Reverse
Name: 169629591
Synonym: MAB_2505c
Alternate gene names: NA
Gene position: 2561871-2559451 (Counterclockwise)
Preceding gene: 169629592
Following gene: 169629590
Centisome position: 50.56
GC content: 60.31
Gene sequence:
>2421_bases ATGAATACCGCACTGTCAGTGACTGATTCACAGATTCCGACATACCCGCGCCCGCTCTCCGCGGAGGAAGTCAGACAGAT CGACGCCTACTGGCGCGCCGCGAACTACCTGTCGGTGGGCCAGATCTACCTGTTGGACAATCCCCTGTTGCGCGATCCGC TCACCGCAAGCCACATCAAGCCCCGCTTGTTGGGACACTGGGGCACGACGCCCGGCCTCAACATCATCTATGCACATCTC AATCGCATTATCCGCCAACGTGATACCAATGTCATGCTGGTCACGGGCCCCGGACACGGCGGCCCCGGGGTGGTGGCCAA CACCTACCTGGAAGGCAGCTACAGCCGCTTCTACGCACACATCGGCCAAGACCTGGACGGCTTGCGAAAACTGTTCAGGC AATTCTCCTTCCCTGGCGGCATTCCCAGCCATACGGCTCCGGAGACACCCGGCTCGATCCACGAAGGCGGCGAGCTCGGG TACGCGCTGGCGCACGCATATGGCGCCGCCTTGGATAATCCAGACCTGGTGGTCGCGTGCGTTATCGGCGACGGGGAGGC CGAGACCGGGCCCCTCGCCGCGAGCTGGCACTCCAACAAATTCGTCAATCCTGCCACCGACGGCGCGGTGCTACCCATCC TGCATCTCAACGGCTACAAGATTGCCAACCCGACGGTATTGGCTCGCATCCCCGAAGACGATCTCACGGCGCTTCTGACC GGATACGGTCATGATCCGCGAATAGTCGTCGGCGACGATCCGGCCGAGGTGCACCAGCAATTGGCCGCGGCATGTGATTG GGCCTTCGACCGGATCTCGCATATCCAGCAAGAAGCCCGACAGGAACGAGCGGCGCATCTTCCCCGCTGGCCACTCATTG TGCTACGCACTCCCAAGGGATGGACCGGACCGAAAATGGTCGAAGGTGTGCCCGTGGAGGGAACCTGGCGTTCTCATCAG GTACCACTGGCCGAATGCCGCACCAACCCATCACAATTGATGCAGCTGGCCAACTGGATGCACAGCTACCGACCCGAGGA GCTTTTCGACGACCGTGGGGTGCTGCGGCCTGAGGTGGCCGGGCTGGCTCCCCGTACGGAAAAGGCGATAGGTAGCAACC CACACGCCAACGGCGGCCTGTTGATTCGGGAGCTTGACCTGCCGGAGGTCGATCAATACGCGGTCCCCGTGGGATCTCCG GGCGCGATGACCGCAGAAGCAACCAAAGTGCTCGGCGCCTATCTTCGCGATGTGATCGATCTCAACCCGAACAACTTCCG GCTAATGGGCCCCGATGAGACGGCATCCAATCGCTTGTCGACGGTCTACGAACGCACCGACAAGGTATGGCTGGAACGTA GCGAAACCACCGATGAACATTTGGGCCCCGAGGGCCGGGTGATGGAAGTACTCTCCGAACACCTGTGTCAGGGGTGGCTT GAGGGATATCTCCTCACCGGACGGCACGGCCTCTTCAACTGTTACGAGGCCTTCGCCCATATTGTCGACTCGATGCTCAA CCAGCATGCCAAATGGCTTTCCAGCAGCTCAGAAGTTCCGTGGCGACAGCCGATTCCTTCTTTGAACTATCTACTGACAT CCCATGTTTGGCGCCAAGACCACAATGGCGCGTCTCACCAAGACCCGGGGTTTATCGATCACGTCGCCAACAAGCGCCCG GAGGTAGTGCGGGTGTATCTACCGCCCGACGCCAACACGCTCTTGGCAGTCACCGACCATTGTCTGCGTAGCAGGCACTG CGTCAATGTTGTGGTGGCGGGTAAACAACCTGCCCTGACCTATTTGAGCATGGAGGCGGCACGCGCACACTGCGCCAGAG GGCTGGGCATCTGGGATTGGGCGAGTAATGCGCCGAACGAGCCGGATGTCGTGCTGGCCTGCGCCGGAGATGTACCAACG CTGGAAACCTTGGCAGCCGCGGACATCTTGCGCCGGAGGTTGCCCGAGCTCGCGGTCCGGGTAATCAATATCGTGGACAT CATGCGCTTGCAACCAGCATCTGAGCATCCACATGGACTGCCCCACACTGATTTTGACGCACTTTTCACCCCTGATAAAC CGATCATCTTCGCCTACCACGGCTATCCCTGGTTGATCCACCGCCTTGCCTACCGCCATACCAATCACGATCGGATGCAC GTACGCGGGTTCAAGGATCGGGGCACCACCACAACACCTTTTGACATGGTGATGCTCAATGATCTGGACCGTTTCCACCT TGTCATGGATGTTATCGACAGGGTCGAGGGTCTGGGCAGCCGAGCCGCAAACCTACGGCAGGAAATGGTCGACGACCGAA TCGCTGCCTGCCGGTACACCCGAGAGCATGGCCGGGATGATCCCGTGATCGCCGACTGGGTATGGGAACACGAACTCGGT TCCCTGAGTGGCAGTCGCTGA
Upstream 100 bases:
>100_bases AGAAGCGCGGACTTATCCAGGTCCACGGCACTTCCCTGACGATCTACGACTGCGAGGTACTTTCCGTGCGCAACCATGCG GCAAGTGGAGTGATCGAGAA
Downstream 100 bases:
>100_bases GAACATCCGCAGCAACGTGAGAGGAGGTCGATCTCGATGGCGAGTCTGCCCACTCCTGAACTCGCGACAGCCAGCGATCT CGTGGAGTTCCTCGAAGACC
Product: putative phosphoketolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MNTALSVTDSQIPTYPRPLSAEEVRQIDAYWRAANYLSVGQIYLLDNPLLRDPLTASHIKPRLLGHWGTTPGLNIIYAHL NRIIRQRDTNVMLVTGPGHGGPGVVANTYLEGSYSRFYAHIGQDLDGLRKLFRQFSFPGGIPSHTAPETPGSIHEGGELG YALAHAYGAALDNPDLVVACVIGDGEAETGPLAASWHSNKFVNPATDGAVLPILHLNGYKIANPTVLARIPEDDLTALLT GYGHDPRIVVGDDPAEVHQQLAAACDWAFDRISHIQQEARQERAAHLPRWPLIVLRTPKGWTGPKMVEGVPVEGTWRSHQ VPLAECRTNPSQLMQLANWMHSYRPEELFDDRGVLRPEVAGLAPRTEKAIGSNPHANGGLLIRELDLPEVDQYAVPVGSP GAMTAEATKVLGAYLRDVIDLNPNNFRLMGPDETASNRLSTVYERTDKVWLERSETTDEHLGPEGRVMEVLSEHLCQGWL EGYLLTGRHGLFNCYEAFAHIVDSMLNQHAKWLSSSSEVPWRQPIPSLNYLLTSHVWRQDHNGASHQDPGFIDHVANKRP EVVRVYLPPDANTLLAVTDHCLRSRHCVNVVVAGKQPALTYLSMEAARAHCARGLGIWDWASNAPNEPDVVLACAGDVPT LETLAAADILRRRLPELAVRVINIVDIMRLQPASEHPHGLPHTDFDALFTPDKPIIFAYHGYPWLIHRLAYRHTNHDRMH VRGFKDRGTTTTPFDMVMLNDLDRFHLVMDVIDRVEGLGSRAANLRQEMVDDRIAACRYTREHGRDDPVIADWVWEHELG SLSGSR
Sequences:
>Translated_806_residues MNTALSVTDSQIPTYPRPLSAEEVRQIDAYWRAANYLSVGQIYLLDNPLLRDPLTASHIKPRLLGHWGTTPGLNIIYAHL NRIIRQRDTNVMLVTGPGHGGPGVVANTYLEGSYSRFYAHIGQDLDGLRKLFRQFSFPGGIPSHTAPETPGSIHEGGELG YALAHAYGAALDNPDLVVACVIGDGEAETGPLAASWHSNKFVNPATDGAVLPILHLNGYKIANPTVLARIPEDDLTALLT GYGHDPRIVVGDDPAEVHQQLAAACDWAFDRISHIQQEARQERAAHLPRWPLIVLRTPKGWTGPKMVEGVPVEGTWRSHQ VPLAECRTNPSQLMQLANWMHSYRPEELFDDRGVLRPEVAGLAPRTEKAIGSNPHANGGLLIRELDLPEVDQYAVPVGSP GAMTAEATKVLGAYLRDVIDLNPNNFRLMGPDETASNRLSTVYERTDKVWLERSETTDEHLGPEGRVMEVLSEHLCQGWL EGYLLTGRHGLFNCYEAFAHIVDSMLNQHAKWLSSSSEVPWRQPIPSLNYLLTSHVWRQDHNGASHQDPGFIDHVANKRP EVVRVYLPPDANTLLAVTDHCLRSRHCVNVVVAGKQPALTYLSMEAARAHCARGLGIWDWASNAPNEPDVVLACAGDVPT LETLAAADILRRRLPELAVRVINIVDIMRLQPASEHPHGLPHTDFDALFTPDKPIIFAYHGYPWLIHRLAYRHTNHDRMH VRGFKDRGTTTTPFDMVMLNDLDRFHLVMDVIDRVEGLGSRAANLRQEMVDDRIAACRYTREHGRDDPVIADWVWEHELG SLSGSR >Mature_806_residues MNTALSVTDSQIPTYPRPLSAEEVRQIDAYWRAANYLSVGQIYLLDNPLLRDPLTASHIKPRLLGHWGTTPGLNIIYAHL NRIIRQRDTNVMLVTGPGHGGPGVVANTYLEGSYSRFYAHIGQDLDGLRKLFRQFSFPGGIPSHTAPETPGSIHEGGELG YALAHAYGAALDNPDLVVACVIGDGEAETGPLAASWHSNKFVNPATDGAVLPILHLNGYKIANPTVLARIPEDDLTALLT GYGHDPRIVVGDDPAEVHQQLAAACDWAFDRISHIQQEARQERAAHLPRWPLIVLRTPKGWTGPKMVEGVPVEGTWRSHQ VPLAECRTNPSQLMQLANWMHSYRPEELFDDRGVLRPEVAGLAPRTEKAIGSNPHANGGLLIRELDLPEVDQYAVPVGSP GAMTAEATKVLGAYLRDVIDLNPNNFRLMGPDETASNRLSTVYERTDKVWLERSETTDEHLGPEGRVMEVLSEHLCQGWL EGYLLTGRHGLFNCYEAFAHIVDSMLNQHAKWLSSSSEVPWRQPIPSLNYLLTSHVWRQDHNGASHQDPGFIDHVANKRP EVVRVYLPPDANTLLAVTDHCLRSRHCVNVVVAGKQPALTYLSMEAARAHCARGLGIWDWASNAPNEPDVVLACAGDVPT LETLAAADILRRRLPELAVRVINIVDIMRLQPASEHPHGLPHTDFDALFTPDKPIIFAYHGYPWLIHRLAYRHTNHDRMH VRGFKDRGTTTTPFDMVMLNDLDRFHLVMDVIDRVEGLGSRAANLRQEMVDDRIAACRYTREHGRDDPVIADWVWEHELG SLSGSR
Specific function: Unknown
COG id: COG3957
COG function: function code G; Phosphoketolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the XFP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR005593 - InterPro: IPR018969 - InterPro: IPR019790 - InterPro: IPR018970 - InterPro: IPR019789 [H]
Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]
EC number: NA
Molecular weight: Translated: 89655; Mature: 89655
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTALSVTDSQIPTYPRPLSAEEVRQIDAYWRAANYLSVGQIYLLDNPLLRDPLTASHIK CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHCC PRLLGHWGTTPGLNIIYAHLNRIIRQRDTNVMLVTGPGHGGPGVVANTYLEGSYSRFYAH CHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHH IGQDLDGLRKLFRQFSFPGGIPSHTAPETPGSIHEGGELGYALAHAYGAALDNPDLVVAC HCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE VIGDGEAETGPLAASWHSNKFVNPATDGAVLPILHLNGYKIANPTVLARIPEDDLTALLT EEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCEEECCCEEEEECCCHHHHHHHH GYGHDPRIVVGDDPAEVHQQLAAACDWAFDRISHIQQEARQERAAHLPRWPLIVLRTPKG CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC WTGPKMVEGVPVEGTWRSHQVPLAECRTNPSQLMQLANWMHSYRPEELFDDRGVLRPEVA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHH GLAPRTEKAIGSNPHANGGLLIRELDLPEVDQYAVPVGSPGAMTAEATKVLGAYLRDVID CCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHC LNPNNFRLMGPDETASNRLSTVYERTDKVWLERSETTDEHLGPEGRVMEVLSEHLCQGWL CCCCCEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCHHHHHHHHHHHHHHHH EGYLLTGRHGLFNCYEAFAHIVDSMLNQHAKWLSSSSEVPWRQPIPSLNYLLTSHVWRQD CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC HNGASHQDPGFIDHVANKRPEVVRVYLPPDANTLLAVTDHCLRSRHCVNVVVAGKQPALT CCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHCCCCEEEEEEECCCCCCH YLSMEAARAHCARGLGIWDWASNAPNEPDVVLACAGDVPTLETLAAADILRRRLPELAVR HHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VINIVDIMRLQPASEHPHGLPHTDFDALFTPDKPIIFAYHGYPWLIHRLAYRHTNHDRMH HHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHHHHCCCCCCEE VRGFKDRGTTTTPFDMVMLNDLDRFHLVMDVIDRVEGLGSRAANLRQEMVDDRIAACRYT EEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH REHGRDDPVIADWVWEHELGSLSGSR HHCCCCCCEEEHHHHHHHHCCCCCCC >Mature Secondary Structure MNTALSVTDSQIPTYPRPLSAEEVRQIDAYWRAANYLSVGQIYLLDNPLLRDPLTASHIK CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHCC PRLLGHWGTTPGLNIIYAHLNRIIRQRDTNVMLVTGPGHGGPGVVANTYLEGSYSRFYAH CHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHH IGQDLDGLRKLFRQFSFPGGIPSHTAPETPGSIHEGGELGYALAHAYGAALDNPDLVVAC HCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE VIGDGEAETGPLAASWHSNKFVNPATDGAVLPILHLNGYKIANPTVLARIPEDDLTALLT EEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCEEECCCEEEEECCCHHHHHHHH GYGHDPRIVVGDDPAEVHQQLAAACDWAFDRISHIQQEARQERAAHLPRWPLIVLRTPKG CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC WTGPKMVEGVPVEGTWRSHQVPLAECRTNPSQLMQLANWMHSYRPEELFDDRGVLRPEVA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHH GLAPRTEKAIGSNPHANGGLLIRELDLPEVDQYAVPVGSPGAMTAEATKVLGAYLRDVID CCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHC LNPNNFRLMGPDETASNRLSTVYERTDKVWLERSETTDEHLGPEGRVMEVLSEHLCQGWL CCCCCEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCHHHHHHHHHHHHHHHH EGYLLTGRHGLFNCYEAFAHIVDSMLNQHAKWLSSSSEVPWRQPIPSLNYLLTSHVWRQD CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC HNGASHQDPGFIDHVANKRPEVVRVYLPPDANTLLAVTDHCLRSRHCVNVVVAGKQPALT CCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHCCCCEEEEEEECCCCCCH YLSMEAARAHCARGLGIWDWASNAPNEPDVVLACAGDVPTLETLAAADILRRRLPELAVR HHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VINIVDIMRLQPASEHPHGLPHTDFDALFTPDKPIIFAYHGYPWLIHRLAYRHTNHDRMH HHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHHHHCCCCCCEE VRGFKDRGTTTTPFDMVMLNDLDRFHLVMDVIDRVEGLGSRAANLRQEMVDDRIAACRYT EEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH REHGRDDPVIADWVWEHELGSLSGSR HHCCCCCCEEEHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA