Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is yhhW [C]
Identifier: 169629532
GI number: 169629532
Start: 2502947
End: 2503927
Strand: Reverse
Name: yhhW [C]
Synonym: MAB_2446c
Alternate gene names: 169629532
Gene position: 2503927-2502947 (Counterclockwise)
Preceding gene: 169629533
Following gene: 169629530
Centisome position: 49.41
GC content: 65.44
Gene sequence:
>981_bases ATGCCAGCTATCACTGTGTCGGCGATGGAGGCCCTGACCCTGCCGCGCATCCCAGTCCCCGAACCCGCCGACACCGAACG TCCGGTACGGTCCATCACCACGGGACCCCGCGGATACGAAGGGGAAGGCTTCCCCGTCGTCCGCGCCTTCGCCGGCGTGC CGTCCTCCGAGTTGGACCCGTTCATCCACATGGATCAGATGGGTGAGGTCGAATACGAACCCGGCGAACCGCGCGGGACG AGTTGGCACCCCCATCGCGGCTTCGAAACCGTCACCTACATGATCGACGGAAGGTTCGCCCATCAGGACTCACACGGCGG CGGCGGGCTCATCCATGACGGCGCCACCCAATGGATGACGGCCGGGTCCGGGATCCTTCATATCGAGACTCCCCCAGCCG AATTGGTGGAAAGTGGGGGAACCTTCCACGGCATCCAGCTGTGGGTCAACCTTCCGGCCCGCGATAAGTTCCTGACACCG GCATACCAGGCGATCGAGGGAGCACAGACCACTCTGGTCAGCTCGCCCGATGGCGGAGCACTGGTGCGGATCATCGCCGG AGATATCGGCCCACATCATGGCCCGGGTAGCACGCACACTCCAATTACCCTGGCGCATGCGACGATTCAGCCGGGAGCGC AATTGAATGTGCCGTGGAATCGGGAGTTCAACGCACTCGTCTACGTGCTCTCCGGACGTGGCACCGTCGGCGCGCTGGGG CATCCCATCGAGCAGGGCCAACTCGCGGTGCTGGGCCCCGGTGACCGAATCACGGTGCAGGCCGACGAGGACCAGGATGG AAATCGCCCCGCCATGGAGGTGCTACTGCTCGGCGGACAGCCGATCCGCGAGCGAGTGGTGGCCTACGGCCCGTTCGTGA TGAACACCAAGGCCGAGCTGATCCAGGCGGTCGAGGACTACCAGGCCGGCCGGTTCGGCGCCATTCCGCCCAACGCCTTG ATGCCGCACGTCGCGCGCTGA
Upstream 100 bases:
>100_bases GCGCTGGCGGCGCTAGCGACCCACGCGGAATGAAGCGGAATAAAGCGGACTGCGGTCCGGTTAATGCAGGCATAGAACCA CAGCCCTCAAGGAGGTTTGC
Downstream 100 bases:
>100_bases TCGCGAGCGCCTACCGCCGAAACGCCCGGCGGTAGGCGCTCGGTGTGGTCGCCGTGACCCGGCGCAGATGCGTCCTCATG GCGGCGACACTGCCAAATCC
Product: putative pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPAITVSAMEALTLPRIPVPEPADTERPVRSITTGPRGYEGEGFPVVRAFAGVPSSELDPFIHMDQMGEVEYEPGEPRGT SWHPHRGFETVTYMIDGRFAHQDSHGGGGLIHDGATQWMTAGSGILHIETPPAELVESGGTFHGIQLWVNLPARDKFLTP AYQAIEGAQTTLVSSPDGGALVRIIAGDIGPHHGPGSTHTPITLAHATIQPGAQLNVPWNREFNALVYVLSGRGTVGALG HPIEQGQLAVLGPGDRITVQADEDQDGNRPAMEVLLLGGQPIRERVVAYGPFVMNTKAELIQAVEDYQAGRFGAIPPNAL MPHVAR
Sequences:
>Translated_326_residues MPAITVSAMEALTLPRIPVPEPADTERPVRSITTGPRGYEGEGFPVVRAFAGVPSSELDPFIHMDQMGEVEYEPGEPRGT SWHPHRGFETVTYMIDGRFAHQDSHGGGGLIHDGATQWMTAGSGILHIETPPAELVESGGTFHGIQLWVNLPARDKFLTP AYQAIEGAQTTLVSSPDGGALVRIIAGDIGPHHGPGSTHTPITLAHATIQPGAQLNVPWNREFNALVYVLSGRGTVGALG HPIEQGQLAVLGPGDRITVQADEDQDGNRPAMEVLLLGGQPIRERVVAYGPFVMNTKAELIQAVEDYQAGRFGAIPPNAL MPHVAR >Mature_325_residues PAITVSAMEALTLPRIPVPEPADTERPVRSITTGPRGYEGEGFPVVRAFAGVPSSELDPFIHMDQMGEVEYEPGEPRGTS WHPHRGFETVTYMIDGRFAHQDSHGGGGLIHDGATQWMTAGSGILHIETPPAELVESGGTFHGIQLWVNLPARDKFLTPA YQAIEGAQTTLVSSPDGGALVRIIAGDIGPHHGPGSTHTPITLAHATIQPGAQLNVPWNREFNALVYVLSGRGTVGALGH PIEQGQLAVLGPGDRITVQADEDQDGNRPAMEVLLLGGQPIRERVVAYGPFVMNTKAELIQAVEDYQAGRFGAIPPNALM PHVAR
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=277, Percent_Identity=36.8231046931408, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI4505823, Length=277, Percent_Identity=36.8231046931408, Blast_Score=156, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 34786; Mature: 34655
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAITVSAMEALTLPRIPVPEPADTERPVRSITTGPRGYEGEGFPVVRAFAGVPSSELDP CCCEEHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCC FIHMDQMGEVEYEPGEPRGTSWHPHRGFETVTYMIDGRFAHQDSHGGGGLIHDGATQWMT EEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCEEECCCHHHEE AGSGILHIETPPAELVESGGTFHGIQLWVNLPARDKFLTPAYQAIEGAQTTLVSSPDGGA CCCCEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCCCE LVRIIAGDIGPHHGPGSTHTPITLAHATIQPGAQLNVPWNREFNALVYVLSGRGTVGALG EEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCEEEEEEECCCCCCCCC HPIEQGQLAVLGPGDRITVQADEDQDGNRPAMEVLLLGGQPIRERVVAYGPFVMNTKAEL CCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHHHEEECCEEECCHHHH IQAVEDYQAGRFGAIPPNALMPHVAR HHHHHHHCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure PAITVSAMEALTLPRIPVPEPADTERPVRSITTGPRGYEGEGFPVVRAFAGVPSSELDP CCEEHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCC FIHMDQMGEVEYEPGEPRGTSWHPHRGFETVTYMIDGRFAHQDSHGGGGLIHDGATQWMT EEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCEEECCCHHHEE AGSGILHIETPPAELVESGGTFHGIQLWVNLPARDKFLTPAYQAIEGAQTTLVSSPDGGA CCCCEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCCCE LVRIIAGDIGPHHGPGSTHTPITLAHATIQPGAQLNVPWNREFNALVYVLSGRGTVGALG EEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCEEEEEEECCCCCCCCC HPIEQGQLAVLGPGDRITVQADEDQDGNRPAMEVLLLGGQPIRERVVAYGPFVMNTKAEL CCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHHHEEECCEEECCHHHH IQAVEDYQAGRFGAIPPNALMPHVAR HHHHHHHCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]