Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629530
Identifier: 169629530
GI number: 169629530
Start: 2501150
End: 2501953
Strand: Reverse
Name: 169629530
Synonym: MAB_2444c
Alternate gene names: NA
Gene position: 2501953-2501150 (Counterclockwise)
Preceding gene: 169629532
Following gene: 169629528
Centisome position: 49.38
GC content: 66.67
Gene sequence:
>804_bases ATGGCATTCACGCCACTGGTCGGATTCGAAGCGCCCATCTTCACTGAAGTCATGGCAACCGTCGAATTGGATTGGCATTG GGCGACCCGCACCGGCGGGGCGGTCTCGACCGCTCAGCGGCGGGCGCTGTTGGGGCGCCTGATCCGCGCGCTACCGGGGA TGGTCAGTGACGCCGTCAAGACCCGGGTCGGGCGGCGGGGGCTGGGCCGAGTGGAGTTCGGATCGATCGTGGTACCCGAT TCCACACTCGCGCGCGCGGCCGAGCAGGAAGCCCGCGACTGTGTCACCCCACACGTGCTCGAGCACTCGTATCGCACCTA TTTCTTCGGCAAAGCACTGGCCGAGCTGGATGACATACAGGTCGACGACGAACTCGTGTACGTCGCAAGCCTGCTGCACG ATCTGCAGCTGGAACATCCGACACCTGGACGATGTTTCGCCGTGGTCGGTGGCGAACGCGCCGCCCGGTTCGTCATGACT CAGGGGGCGCCCGCGGACCGTGCCGAGGCGGTAGGCGCGGCGATCGCCGCGCATATAACCCTGGGCGCCAGCGACAACCT CGCAGATCCGGGTGGATTCGTCTCAGCGGGGGCAGGAACTGACGTATTCGGCCTGCGGCTGTCGGACCTGGATGCCGAGT GGGTGCAGGAGCTACTGCACCGACATCCGCGGCTGGATTTCAAACGGCACATGCGCAGGGCGTGGGCTGCCGAGAGCGCC GCAGTGCCGAACGGGCGCGCCGCGTGGCTCACCCGATACGCGGCCTTCCCCATGCTCGTCAAGGCCGCCCCCTTTGGGGA ATAG
Upstream 100 bases:
>100_bases TGCACGGCGCACGCCAAGTCGTAGGTGATCACGCCGTCGAGCGCCAGCGCTGCCACCGTCTTGGTGCCCATACCTCACTA TGGCATGAATCGGAGTATCT
Downstream 100 bases:
>100_bases TGCTACGACAGCAGCCTGCGCAGCAGGTGCAGGGCGACAGTAGTGGCGCGCTCGCGAATTTGGTTGCGGTTTCCCGGGAT AACCACCCGTAGTTCCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; Cyanamide Hydratase; HD Domain-Containing; Sensory Box HD Domain-Containing Protein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MAFTPLVGFEAPIFTEVMATVELDWHWATRTGGAVSTAQRRALLGRLIRALPGMVSDAVKTRVGRRGLGRVEFGSIVVPD STLARAAEQEARDCVTPHVLEHSYRTYFFGKALAELDDIQVDDELVYVASLLHDLQLEHPTPGRCFAVVGGERAARFVMT QGAPADRAEAVGAAIAAHITLGASDNLADPGGFVSAGAGTDVFGLRLSDLDAEWVQELLHRHPRLDFKRHMRRAWAAESA AVPNGRAAWLTRYAAFPMLVKAAPFGE
Sequences:
>Translated_267_residues MAFTPLVGFEAPIFTEVMATVELDWHWATRTGGAVSTAQRRALLGRLIRALPGMVSDAVKTRVGRRGLGRVEFGSIVVPD STLARAAEQEARDCVTPHVLEHSYRTYFFGKALAELDDIQVDDELVYVASLLHDLQLEHPTPGRCFAVVGGERAARFVMT QGAPADRAEAVGAAIAAHITLGASDNLADPGGFVSAGAGTDVFGLRLSDLDAEWVQELLHRHPRLDFKRHMRRAWAAESA AVPNGRAAWLTRYAAFPMLVKAAPFGE >Mature_266_residues AFTPLVGFEAPIFTEVMATVELDWHWATRTGGAVSTAQRRALLGRLIRALPGMVSDAVKTRVGRRGLGRVEFGSIVVPDS TLARAAEQEARDCVTPHVLEHSYRTYFFGKALAELDDIQVDDELVYVASLLHDLQLEHPTPGRCFAVVGGERAARFVMTQ GAPADRAEAVGAAIAAHITLGASDNLADPGGFVSAGAGTDVFGLRLSDLDAEWVQELLHRHPRLDFKRHMRRAWAAESAA VPNGRAAWLTRYAAFPMLVKAAPFGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28927; Mature: 28796
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFTPLVGFEAPIFTEVMATVELDWHWATRTGGAVSTAQRRALLGRLIRALPGMVSDAVK CCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH TRVGRRGLGRVEFGSIVVPDSTLARAAEQEARDCVTPHVLEHSYRTYFFGKALAELDDIQ HHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC VDDELVYVASLLHDLQLEHPTPGRCFAVVGGERAARFVMTQGAPADRAEAVGAAIAAHIT CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHEEEEEECCCCCHHHHHHHHHHHHHEE LGASDNLADPGGFVSAGAGTDVFGLRLSDLDAEWVQELLHRHPRLDFKRHMRRAWAAESA ECCCCCCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC AVPNGRAAWLTRYAAFPMLVKAAPFGE CCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AFTPLVGFEAPIFTEVMATVELDWHWATRTGGAVSTAQRRALLGRLIRALPGMVSDAVK CCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH TRVGRRGLGRVEFGSIVVPDSTLARAAEQEARDCVTPHVLEHSYRTYFFGKALAELDDIQ HHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC VDDELVYVASLLHDLQLEHPTPGRCFAVVGGERAARFVMTQGAPADRAEAVGAAIAAHIT CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHEEEEEECCCCCHHHHHHHHHHHHHEE LGASDNLADPGGFVSAGAGTDVFGLRLSDLDAEWVQELLHRHPRLDFKRHMRRAWAAESA ECCCCCCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC AVPNGRAAWLTRYAAFPMLVKAAPFGE CCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA