| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629381
Identifier: 169629381
GI number: 169629381
Start: 2343013
End: 2344221
Strand: Reverse
Name: 169629381
Synonym: MAB_2295c
Alternate gene names: NA
Gene position: 2344221-2343013 (Counterclockwise)
Preceding gene: 169629385
Following gene: 169629380
Centisome position: 46.26
GC content: 65.84
Gene sequence:
>1209_bases ATGGGGCGCTACCGCACGCGCCCGGGAGGTCGCAGCTACTCTTCGGTGGTGTCCTACGCGCCGGCGCCCACACCCCTTCC ACCGATGCCCGGATTTGGGCAGCGGATCAAGCAGGTAGGTGCGCCGATCGGCGTCATCATCGCTCTTGCGCTGGTGACGG GATTGATCATTACGGGCCTGCTGCTGTCCAATCCCGTTGGGGCGATGATCGGCCTGGTCCTCTCCAGCGTCGCCATCGGG ATCGTGGTTCTGTGCTATCTCTGGCTGGATCGCTGGGAACCGGAGCCCTCCCGGCTCCTTGTGCTGGCATTCGTCTGGGG CGCATCGCTTGCCGTCGTCGTGTCGATCGTCCTTGAGATGGCCTTCGGCTCGGTCTACGCCCCGGACGGCAGCACGTCCT TCGCCTCGATCGCCATCCGTGCACCATTCATCGAAGAGGCCGCCAAGGGCGCCTTCCTGCTGCTGATGCTGACCGGCCGG CGCCGCCACGAGCTGAATTCACTGACCGACTGCCTGGTGTACGCGGGTATCACCGCGGCGGGATTCGCGTGGCTCGAAGA CATCGCCTACATCGGCAGCGGCAACACCGTGGGAGAGTCCGTGCTGACCGCGATCGTCCGGCTCGGACTGGGCCCGTTCG CGCATTCGCTCTTCACAAGCATGACGGGGGTCGGCGTGTATTACGCCCTGCGGCGACGTGACGCCACGGGCAAGTTCTTC CGCATCCTGGCCGGATACCTGGCGGCGGTGGTCATGCACGGTTTGTGGAATGGCTCATCGTTCCTCGGGCTCAAGGGCTA TCTAGCCGTGTACGTGCTCTGGATGGTGCCGATGTTCGTACTGATGATCGTGGTCGGCGTACGCAGCCGGCGTAGGGAAC AGCACGTGGTCGCCGGGAAACTGCCCGGGATGGTGGCAGTCGGGTTGATCACTCCCAATGAGGCGACCTGGCTGGGATCG CTCAAGGAACGCAAACACGCCATCGCCGCTGCCAGACGAATCGGCGGGGCCCCCGGCGGGGCCGCCGTGAAAAACTTCGC GGCCCAGGTCGTTGAGCTCGCCTTCGTGCGGGATCGCATCGAACGGGGCTCCCGGGATCCACGGGACGTCGCGATGCAGA CCGAGGAGGCATACGCGGTCATGGCCGCCCGCGCGGCCGCGCCGATCTTGCAAGCACTCGCGGGCTATCGGGCTTCCCTC TCGGGGTAG
Upstream 100 bases:
>100_bases CGGACGCGCTTCTACCTCCGCACGTGCGGCAGAGATGTGCTTCACCTTACTAGACCGCGCTCCACCAGCACAAACCCGGC CGCCCCGAGGGGCGGCGTCA
Downstream 100 bases:
>100_bases CGTGATGGGCCAGATGTTGTCTCATCAATGACGATCAGGAGCATCATGTCGGACATGCCGAGAGATGAATTAGTAGACGT TCTCATCGTCGGCGCCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MGRYRTRPGGRSYSSVVSYAPAPTPLPPMPGFGQRIKQVGAPIGVIIALALVTGLIITGLLLSNPVGAMIGLVLSSVAIG IVVLCYLWLDRWEPEPSRLLVLAFVWGASLAVVVSIVLEMAFGSVYAPDGSTSFASIAIRAPFIEEAAKGAFLLLMLTGR RRHELNSLTDCLVYAGITAAGFAWLEDIAYIGSGNTVGESVLTAIVRLGLGPFAHSLFTSMTGVGVYYALRRRDATGKFF RILAGYLAAVVMHGLWNGSSFLGLKGYLAVYVLWMVPMFVLMIVVGVRSRRREQHVVAGKLPGMVAVGLITPNEATWLGS LKERKHAIAAARRIGGAPGGAAVKNFAAQVVELAFVRDRIERGSRDPRDVAMQTEEAYAVMAARAAAPILQALAGYRASL SG
Sequences:
>Translated_402_residues MGRYRTRPGGRSYSSVVSYAPAPTPLPPMPGFGQRIKQVGAPIGVIIALALVTGLIITGLLLSNPVGAMIGLVLSSVAIG IVVLCYLWLDRWEPEPSRLLVLAFVWGASLAVVVSIVLEMAFGSVYAPDGSTSFASIAIRAPFIEEAAKGAFLLLMLTGR RRHELNSLTDCLVYAGITAAGFAWLEDIAYIGSGNTVGESVLTAIVRLGLGPFAHSLFTSMTGVGVYYALRRRDATGKFF RILAGYLAAVVMHGLWNGSSFLGLKGYLAVYVLWMVPMFVLMIVVGVRSRRREQHVVAGKLPGMVAVGLITPNEATWLGS LKERKHAIAAARRIGGAPGGAAVKNFAAQVVELAFVRDRIERGSRDPRDVAMQTEEAYAVMAARAAAPILQALAGYRASL SG >Mature_401_residues GRYRTRPGGRSYSSVVSYAPAPTPLPPMPGFGQRIKQVGAPIGVIIALALVTGLIITGLLLSNPVGAMIGLVLSSVAIGI VVLCYLWLDRWEPEPSRLLVLAFVWGASLAVVVSIVLEMAFGSVYAPDGSTSFASIAIRAPFIEEAAKGAFLLLMLTGRR RHELNSLTDCLVYAGITAAGFAWLEDIAYIGSGNTVGESVLTAIVRLGLGPFAHSLFTSMTGVGVYYALRRRDATGKFFR ILAGYLAAVVMHGLWNGSSFLGLKGYLAVYVLWMVPMFVLMIVVGVRSRRREQHVVAGKLPGMVAVGLITPNEATWLGSL KERKHAIAAARRIGGAPGGAAVKNFAAQVVELAFVRDRIERGSRDPRDVAMQTEEAYAVMAARAAAPILQALAGYRASLS G
Specific function: Unknown
COG id: COG2339
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42762; Mature: 42631
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYRTRPGGRSYSSVVSYAPAPTPLPPMPGFGQRIKQVGAPIGVIIALALVTGLIITGL CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLSNPVGAMIGLVLSSVAIGIVVLCYLWLDRWEPEPSRLLVLAFVWGASLAVVVSIVLEM HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHH AFGSVYAPDGSTSFASIAIRAPFIEEAAKGAFLLLMLTGRRRHELNSLTDCLVYAGITAA HHCCEECCCCCCCHHHHEEECCHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH GFAWLEDIAYIGSGNTVGESVLTAIVRLGLGPFAHSLFTSMTGVGVYYALRRRDATGKFF HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RILAGYLAAVVMHGLWNGSSFLGLKGYLAVYVLWMVPMFVLMIVVGVRSRRREQHVVAGK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPGMVAVGLITPNEATWLGSLKERKHAIAAARRIGGAPGGAAVKNFAAQVVELAFVRDRI CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ERGSRDPRDVAMQTEEAYAVMAARAAAPILQALAGYRASLSG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRYRTRPGGRSYSSVVSYAPAPTPLPPMPGFGQRIKQVGAPIGVIIALALVTGLIITGL CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLSNPVGAMIGLVLSSVAIGIVVLCYLWLDRWEPEPSRLLVLAFVWGASLAVVVSIVLEM HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHH AFGSVYAPDGSTSFASIAIRAPFIEEAAKGAFLLLMLTGRRRHELNSLTDCLVYAGITAA HHCCEECCCCCCCHHHHEEECCHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH GFAWLEDIAYIGSGNTVGESVLTAIVRLGLGPFAHSLFTSMTGVGVYYALRRRDATGKFF HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RILAGYLAAVVMHGLWNGSSFLGLKGYLAVYVLWMVPMFVLMIVVGVRSRRREQHVVAGK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPGMVAVGLITPNEATWLGSLKERKHAIAAARRIGGAPGGAAVKNFAAQVVELAFVRDRI CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ERGSRDPRDVAMQTEEAYAVMAARAAAPILQALAGYRASLSG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA