Click here to switch to the map view.

The map label for this gene is 169629385

Identifier: 169629385

GI number: 169629385

Start: 2347695

End: 2348360

Strand: Reverse

Name: 169629385

Synonym: MAB_2299c

Alternate gene names: NA

Gene position: 2348360-2347695 (Counterclockwise)

Preceding gene: 169629390

Following gene: 169629381

Centisome position: 46.34

GC content: 63.96

Gene sequence:

>666_bases
GTGGCGCAACTGACATTCCAACGCGCCCGGACTGACGAAAAGAAGCGTCAGCGGGCAGCGGCAATCGTGGAAGCTGCGCG
GTCGCTGGCTGTGGAATCAGGCGTCACCTCGGTGACGTTGACGGCTGTCGCCAATCGCGCCGGAGTGCACTACTCCGCGG
TCCGGCGCTACTTCAGTTCGCATAAAGAAGTGTTGTTGCATCTGGCTGCCGAGGGCTGGACCCGATGGTCGGCCACGGTG
TGCGCGGCGCTTGCCGAACCCGGACCCGGGTCCCCCGCCCGAGTGGCCGAGTCTCTGGTCCACGGCCTGGTCGACGACCC
CCTGTTTTGCGATCTGCTAGCCAACCAGCACCTTCACCTGGAGCATGAGGTCGACGTCGAACGAGTCGCCGAGGTCAAGC
AAATCAGCAACGTGGCCGTCATGTCGATCGCCGAGTCGATCGAACGCACCCTTCCAGAAATCGGCCGCAAAGGCTCGCTG
GACATCCTCGTCGCCGGGTTCTCGCTGGCCGCAATGCTGTGGCAGATTGCGCATCCTCCCGAGGGCCTGGAGCACGACTA
CCGCAGCGAACCCGGTGTCCCACCGGACTGGAGCCTCGATTTCGAACCCGCTCTGACCAGGCTGTTAACGGCCACCTGCA
TCGGCATCGTCGAGCAGAAGCACTGA

Upstream 100 bases:

>100_bases
CGCGTTTCATCAGGATCTTTAACGCATATGACGTGCGTAACGCACGCTACCGGGTGGTTCGTTGGCTCGCAAATCACACG
CCGTGCGTTATCCTCGGCAA

Downstream 100 bases:

>100_bases
AACGGAAAAGCTAAGGCGTCCATTGGGATGCATTGGCCCAATCCAGTGCCCGCGTGTACGCCTGGGCGAACCAAGGCTCC
TTGGCATCCACGTAGGCGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Regulatory Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR; Transcriptional Regulator TetR Family Protein

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MAQLTFQRARTDEKKRQRAAAIVEAARSLAVESGVTSVTLTAVANRAGVHYSAVRRYFSSHKEVLLHLAAEGWTRWSATV
CAALAEPGPGSPARVAESLVHGLVDDPLFCDLLANQHLHLEHEVDVERVAEVKQISNVAVMSIAESIERTLPEIGRKGSL
DILVAGFSLAAMLWQIAHPPEGLEHDYRSEPGVPPDWSLDFEPALTRLLTATCIGIVEQKH

Sequences:

>Translated_221_residues
MAQLTFQRARTDEKKRQRAAAIVEAARSLAVESGVTSVTLTAVANRAGVHYSAVRRYFSSHKEVLLHLAAEGWTRWSATV
CAALAEPGPGSPARVAESLVHGLVDDPLFCDLLANQHLHLEHEVDVERVAEVKQISNVAVMSIAESIERTLPEIGRKGSL
DILVAGFSLAAMLWQIAHPPEGLEHDYRSEPGVPPDWSLDFEPALTRLLTATCIGIVEQKH
>Mature_220_residues
AQLTFQRARTDEKKRQRAAAIVEAARSLAVESGVTSVTLTAVANRAGVHYSAVRRYFSSHKEVLLHLAAEGWTRWSATVC
AALAEPGPGSPARVAESLVHGLVDDPLFCDLLANQHLHLEHEVDVERVAEVKQISNVAVMSIAESIERTLPEIGRKGSLD
ILVAGFSLAAMLWQIAHPPEGLEHDYRSEPGVPPDWSLDFEPALTRLLTATCIGIVEQKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24110; Mature: 23978

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLTFQRARTDEKKRQRAAAIVEAARSLAVESGVTSVTLTAVANRAGVHYSAVRRYFSS
CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH
HKEVLLHLAAEGWTRWSATVCAALAEPGPGSPARVAESLVHGLVDDPLFCDLLANQHLHL
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
EHEVDVERVAEVKQISNVAVMSIAESIERTLPEIGRKGSLDILVAGFSLAAMLWQIAHPP
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
EGLEHDYRSEPGVPPDWSLDFEPALTRLLTATCIGIVEQKH
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQLTFQRARTDEKKRQRAAAIVEAARSLAVESGVTSVTLTAVANRAGVHYSAVRRYFSS
CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH
HKEVLLHLAAEGWTRWSATVCAALAEPGPGSPARVAESLVHGLVDDPLFCDLLANQHLHL
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
EHEVDVERVAEVKQISNVAVMSIAESIERTLPEIGRKGSLDILVAGFSLAAMLWQIAHPP
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
EGLEHDYRSEPGVPPDWSLDFEPALTRLLTATCIGIVEQKH
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA