Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628974
Identifier: 169628974
GI number: 169628974
Start: 1884774
End: 1885199
Strand: Direct
Name: 169628974
Synonym: MAB_1886
Alternate gene names: NA
Gene position: 1884774-1885199 (Clockwise)
Preceding gene: 169628973
Following gene: 169628975
Centisome position: 37.2
GC content: 65.02
Gene sequence:
>426_bases GTGGTCGCGGCGGCTGACGCCTCGAACTATGCCCGCAAGTTGGGCATCCAGCGTGATCAGCTTGTGCAGGAGCTGGGCTG GGATGAGGACACGGATGACGACATCCGGGCTGACATCGAGGACGCATGCGGTTCGGAGCTCCTCGACGAGGACTCCGACG ATGTGGTCGATGTGGTCCTGTTGTGGTGGCGCGATGACGACGGCGACCTGGTCGACGCGTTGATGGACGCCATCACTCCC TTGGCTGAGGACGGCGTGATTTGGGTGTTGACACCCAAGACCGGCAAGTCCGGCCATGTGCAGCCCTCGGAGATCGCCGA GTCGGCGCCGACGGCGGGTCTGGTGCAGACATCGTCTCTCAACCTGGGGGATTGGAGCGCGACGCGGCTGGTGCAGCCCA AATCATCCCGGGGCGGGCGGCGATGA
Upstream 100 bases:
>100_bases GGCCGATAGTGCCTGACGAGGATTGCCATCGGCATGCGACGATGTGAGCATTCATCCCATGTGCGCAAGCACGCACCTGT GAATAAGGAGGGGCCGAACG
Downstream 100 bases:
>100_bases GCGCTCGCGCGAAGAGCAGAAGGTCTCGCTAATGCTGCCTGTTGGCACCGTCGCCCCCGACTTCACCCTGCGCAACCAAA ACAACCAGCCCGTCAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MVAAADASNYARKLGIQRDQLVQELGWDEDTDDDIRADIEDACGSELLDEDSDDVVDVVLLWWRDDDGDLVDALMDAITP LAEDGVIWVLTPKTGKSGHVQPSEIAESAPTAGLVQTSSLNLGDWSATRLVQPKSSRGGRR
Sequences:
>Translated_141_residues MVAAADASNYARKLGIQRDQLVQELGWDEDTDDDIRADIEDACGSELLDEDSDDVVDVVLLWWRDDDGDLVDALMDAITP LAEDGVIWVLTPKTGKSGHVQPSEIAESAPTAGLVQTSSLNLGDWSATRLVQPKSSRGGRR >Mature_141_residues MVAAADASNYARKLGIQRDQLVQELGWDEDTDDDIRADIEDACGSELLDEDSDDVVDVVLLWWRDDDGDLVDALMDAITP LAEDGVIWVLTPKTGKSGHVQPSEIAESAPTAGLVQTSSLNLGDWSATRLVQPKSSRGGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021412 [H]
Pfam domain/function: PF11253 DUF3052 [H]
EC number: NA
Molecular weight: Translated: 15279; Mature: 15279
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAAADASNYARKLGIQRDQLVQELGWDEDTDDDIRADIEDACGSELLDEDSDDVVDVVL CCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEEEE LWWRDDDGDLVDALMDAITPLAEDGVIWVLTPKTGKSGHVQPSEIAESAPTAGLVQTSSL EEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEECCCC NLGDWSATRLVQPKSSRGGRR CCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MVAAADASNYARKLGIQRDQLVQELGWDEDTDDDIRADIEDACGSELLDEDSDDVVDVVL CCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEEEE LWWRDDDGDLVDALMDAITPLAEDGVIWVLTPKTGKSGHVQPSEIAESAPTAGLVQTSSL EEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEECCCC NLGDWSATRLVQPKSSRGGRR CCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]