Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010397 |
Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628973
Identifier: 169628973
GI number: 169628973
Start: 1884125
End: 1884682
Strand: Direct
Name: 169628973
Synonym: MAB_1885
Alternate gene names: NA
Gene position: 1884125-1884682 (Clockwise)
Preceding gene: 169628962
Following gene: 169628974
Centisome position: 37.18
GC content: 62.9
Gene sequence:
>558_bases ATGCGTATGGCGGCGCTGTTGATCGCGCTGGCGGCCATCTGTGCCGCGGTCGTGGCGGGCTGCACGGTGGCCACGGGAGG GCAGGCGTCGGCGCCCAGTGAGTCGGTGTCGGAGTACCGCACATTCGTCTCACAGTCCGTCGAAGCGTCGCGGTCCGAGG AGTCCAAGCGTCAGGAGACATCGCGTGCGCAGGCTCAGGCCGATGCGTGCGAGACGTTCGCGATGACCTCGGACGCGGCT GTTTCAGCAGGTAATGACCTGATTTCCGTCATGAATGACGAAGGTGGCTACGGATCGAGTGCCGAAGCCAAGGTGGGGCC GGTGATCAATGCGCTCAACACCAGCGCCGGCCAAATTGACTCCGTCAAGGCGAAGGCCCAGACGGACGAGTTGCGCGATG CACTCACGCAGTACGTCGAGCAGTCCCGAAAACTGGCCGGTGCGTTCGACAATCGGTTGAGCAGTAGCACTCTCAACGCG GTGGTGCGCACGTTCAACGACGCGCGGGAGCGTGCCGGGAAGATCTGTGAACCGCTTCTACAAACAAAAGGCCGATAG
Upstream 100 bases:
>100_bases GGTATCCCCATCGTGCCCCAAGTCACTTGCTACTAGCGAGTCTGGTCTCTCAACATGCGGCCTACCGGCCTACGGGGCGC GCAGCGGGTACCGTCGTTAC
Downstream 100 bases:
>100_bases TGCCTGACGAGGATTGCCATCGGCATGCGACGATGTGAGCATTCATCCCATGTGCGCAAGCACGCACCTGTGAATAAGGA GGGGCCGAACGGTGGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MRMAALLIALAAICAAVVAGCTVATGGQASAPSESVSEYRTFVSQSVEASRSEESKRQETSRAQAQADACETFAMTSDAA VSAGNDLISVMNDEGGYGSSAEAKVGPVINALNTSAGQIDSVKAKAQTDELRDALTQYVEQSRKLAGAFDNRLSSSTLNA VVRTFNDARERAGKICEPLLQTKGR
Sequences:
>Translated_185_residues MRMAALLIALAAICAAVVAGCTVATGGQASAPSESVSEYRTFVSQSVEASRSEESKRQETSRAQAQADACETFAMTSDAA VSAGNDLISVMNDEGGYGSSAEAKVGPVINALNTSAGQIDSVKAKAQTDELRDALTQYVEQSRKLAGAFDNRLSSSTLNA VVRTFNDARERAGKICEPLLQTKGR >Mature_185_residues MRMAALLIALAAICAAVVAGCTVATGGQASAPSESVSEYRTFVSQSVEASRSEESKRQETSRAQAQADACETFAMTSDAA VSAGNDLISVMNDEGGYGSSAEAKVGPVINALNTSAGQIDSVKAKAQTDELRDALTQYVEQSRKLAGAFDNRLSSSTLNA VVRTFNDARERAGKICEPLLQTKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19317; Mature: 19317
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMAALLIALAAICAAVVAGCTVATGGQASAPSESVSEYRTFVSQSVEASRSEESKRQET CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRAQAQADACETFAMTSDAAVSAGNDLISVMNDEGGYGSSAEAKVGPVINALNTSAGQID HHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHH SVKAKAQTDELRDALTQYVEQSRKLAGAFDNRLSSSTLNAVVRTFNDARERAGKICEPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTKGR HCCCC >Mature Secondary Structure MRMAALLIALAAICAAVVAGCTVATGGQASAPSESVSEYRTFVSQSVEASRSEESKRQET CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRAQAQADACETFAMTSDAAVSAGNDLISVMNDEGGYGSSAEAKVGPVINALNTSAGQID HHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHH SVKAKAQTDELRDALTQYVEQSRKLAGAFDNRLSSSTLNAVVRTFNDARERAGKICEPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTKGR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA