Click here to switch to the map view.

The map label for this gene is 169627439

Identifier: 169627439

GI number: 169627439

Start: 332819

End: 334006

Strand: Direct

Name: 169627439

Synonym: MAB_0335

Alternate gene names: NA

Gene position: 332819-334006 (Clockwise)

Preceding gene: 169627434

Following gene: 169627440

Centisome position: 6.57

GC content: 66.41

Gene sequence:

>1188_bases
ATGCGCACGCCGGTGCTACTCGTGTCCGGACAGACCGATACCGACGCGGTCACTCAGGTCTTGGCGCGCGACCCGGGCAC
AGTCGTCGTCACGCACCGCTTTGACGGACACATCGTCATGCGGTCCGTCGCGGGTATTCGGGGAGTCACCGAGACCGTGC
TGGAGCTGGCCCACGGCTGCGTCTCGTGCACGATCCGTGACGATTTGCTCGTCTTGCTGCGCAAACTGCATCGGCGCGAC
GACGTGGGAAGAATCGTCCTTCATCTCGAACCGTGGCTCGAGGCCGACCCGATCTGCTGGGCGATCAACACCGTGCCTGT
GCGGGTGGGGCCCGGATTCGTCGATGGTCCGGCCGCGCGTGACGTCCAGATCGCCGGAGTGGTCAGCTGCGTGGACAGCG
CTAACTGGCTGGAACAGGCGCTCGGCGATGACGAACTTGCGGATGGCCGGACGGTGGCGCAGGTGGTGATCGGTCAGGCC
GAGTTCGCCGACGTGTTGCTGGTGCGAAATCCGGAGCCGGAGGTCCTCTCGGTGTTGCGGCGTTTGGCGCCGCGGGCGCG
CATCACCGCGCGCGTCGGTCGTGTCGAGCAGGCTCTCGACCATCTGGAAGAGGATGCGCGGTGCGGCCGGGCCGATAATC
CCCATGGCGCATTGCTGGCCGGCCAGCCATCCCTGGCCGCCGACGGCCGGGTCGAGTTGGTGGAGTTCAACGCGCGCAGG
CCCTTTCATCCGCTACGGCTGCATGCCGCGATCGACATGCTGCTCGACGGCGTGATCCGTACTCGTGGCCGGCTGTGGCT
GGCGACCCAGGGCGAGCAGGCAATGTGGCTGGAGTCCGCCGGGGGCGGGCTCAGGGTGTCGGCTGCCGGAAAGTGGCTGG
CAGCAATGGATTCAGTAGAAGTGCAACGGGTAGACCCGGAGCGCAGGGCATTCGCCGACCTCATGTGGGACTACCAGTTC
GGGGATCGCCACAACGCGATGACAGTGCTGGTCTGCGGCGCCGACAGCCGTGAGGTCCTCGACGCGCTGCGCGGTGCGCT
GCTCACCGATGACGAAATGGCAAGCCCCGCAGACTGGGACGAGTTTGACGACCCGTTCGGCGACTGGCACGAGGATCCAT
GCGAGCACCTGTCCGAGGCAGAGGCTTTTCTCGCCTACGGCGACCACAACACAGAAGGGAACCACTGA

Upstream 100 bases:

>100_bases
GAATCATTTTCGACAAGTGCTGCTCGGGACTGTACCGTGAACCTTGTAGTAATGAAAATCGTTTGCATTTAGCTGCACAA
GGGCTGGAAAAGGGAGAGTC

Downstream 100 bases:

>100_bases
TGAAACCCGGAATTCACCCCGACTACCACCCCGTCGTCTTCCAAGACACCACCACCGGGAAGATGTTCCTGACCCGCTCG
ACGGCGACGAGCACCCGCAC

Product: cobalamin synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MRTPVLLVSGQTDTDAVTQVLARDPGTVVVTHRFDGHIVMRSVAGIRGVTETVLELAHGCVSCTIRDDLLVLLRKLHRRD
DVGRIVLHLEPWLEADPICWAINTVPVRVGPGFVDGPAARDVQIAGVVSCVDSANWLEQALGDDELADGRTVAQVVIGQA
EFADVLLVRNPEPEVLSVLRRLAPRARITARVGRVEQALDHLEEDARCGRADNPHGALLAGQPSLAADGRVELVEFNARR
PFHPLRLHAAIDMLLDGVIRTRGRLWLATQGEQAMWLESAGGGLRVSAAGKWLAAMDSVEVQRVDPERRAFADLMWDYQF
GDRHNAMTVLVCGADSREVLDALRGALLTDDEMASPADWDEFDDPFGDWHEDPCEHLSEAEAFLAYGDHNTEGNH

Sequences:

>Translated_395_residues
MRTPVLLVSGQTDTDAVTQVLARDPGTVVVTHRFDGHIVMRSVAGIRGVTETVLELAHGCVSCTIRDDLLVLLRKLHRRD
DVGRIVLHLEPWLEADPICWAINTVPVRVGPGFVDGPAARDVQIAGVVSCVDSANWLEQALGDDELADGRTVAQVVIGQA
EFADVLLVRNPEPEVLSVLRRLAPRARITARVGRVEQALDHLEEDARCGRADNPHGALLAGQPSLAADGRVELVEFNARR
PFHPLRLHAAIDMLLDGVIRTRGRLWLATQGEQAMWLESAGGGLRVSAAGKWLAAMDSVEVQRVDPERRAFADLMWDYQF
GDRHNAMTVLVCGADSREVLDALRGALLTDDEMASPADWDEFDDPFGDWHEDPCEHLSEAEAFLAYGDHNTEGNH
>Mature_395_residues
MRTPVLLVSGQTDTDAVTQVLARDPGTVVVTHRFDGHIVMRSVAGIRGVTETVLELAHGCVSCTIRDDLLVLLRKLHRRD
DVGRIVLHLEPWLEADPICWAINTVPVRVGPGFVDGPAARDVQIAGVVSCVDSANWLEQALGDDELADGRTVAQVVIGQA
EFADVLLVRNPEPEVLSVLRRLAPRARITARVGRVEQALDHLEEDARCGRADNPHGALLAGQPSLAADGRVELVEFNARR
PFHPLRLHAAIDMLLDGVIRTRGRLWLATQGEQAMWLESAGGGLRVSAAGKWLAAMDSVEVQRVDPERRAFADLMWDYQF
GDRHNAMTVLVCGADSREVLDALRGALLTDDEMASPADWDEFDDPFGDWHEDPCEHLSEAEAFLAYGDHNTEGNH

Specific function: Unknown

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 43325; Mature: 43325

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPVLLVSGQTDTDAVTQVLARDPGTVVVTHRFDGHIVMRSVAGIRGVTETVLELAHGC
CCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHH
VSCTIRDDLLVLLRKLHRRDDVGRIVLHLEPWLEADPICWAINTVPVRVGPGFVDGPAAR
EEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCC
DVQIAGVVSCVDSANWLEQALGDDELADGRTVAQVVIGQAEFADVLLVRNPEPEVLSVLR
CEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEEEEEEECCCHHHHHHHH
RLAPRARITARVGRVEQALDHLEEDARCGRADNPHGALLAGQPSLAADGRVELVEFNARR
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCC
PFHPLRLHAAIDMLLDGVIRTRGRLWLATQGEQAMWLESAGGGLRVSAAGKWLAAMDSVE
CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEEECCCCHHHHHCCCE
VQRVDPERRAFADLMWDYQFGDRHNAMTVLVCGADSREVLDALRGALLTDDEMASPADWD
EEECCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCC
EFDDPFGDWHEDPCEHLSEAEAFLAYGDHNTEGNH
CCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCC
>Mature Secondary Structure
MRTPVLLVSGQTDTDAVTQVLARDPGTVVVTHRFDGHIVMRSVAGIRGVTETVLELAHGC
CCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHH
VSCTIRDDLLVLLRKLHRRDDVGRIVLHLEPWLEADPICWAINTVPVRVGPGFVDGPAAR
EEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCC
DVQIAGVVSCVDSANWLEQALGDDELADGRTVAQVVIGQAEFADVLLVRNPEPEVLSVLR
CEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEEEEEEECCCHHHHHHHH
RLAPRARITARVGRVEQALDHLEEDARCGRADNPHGALLAGQPSLAADGRVELVEFNARR
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCC
PFHPLRLHAAIDMLLDGVIRTRGRLWLATQGEQAMWLESAGGGLRVSAAGKWLAAMDSVE
CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEEECCCCHHHHHCCCE
VQRVDPERRAFADLMWDYQFGDRHNAMTVLVCGADSREVLDALRGALLTDDEMASPADWD
EEECCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCC
EFDDPFGDWHEDPCEHLSEAEAFLAYGDHNTEGNH
CCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]