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The map label for this gene is rpmE.2

Identifier: 169627440

GI number: 169627440

Start: 334006

End: 334248

Strand: Direct

Name: rpmE.2

Synonym: MAB_0336

Alternate gene names: 169627440

Gene position: 334006-334248 (Clockwise)

Preceding gene: 169627439

Following gene: 169627443

Centisome position: 6.59

GC content: 62.14

Gene sequence:

>243_bases
ATGAAACCCGGAATTCACCCCGACTACCACCCCGTCGTCTTCCAAGACACCACCACCGGGAAGATGTTCCTGACCCGCTC
GACGGCGACGAGCACCCGCACCGTTGAGTGGGAGGGTAAGGAGTATCCGCTGATCACCGCCGAGGTGACCGCGGATTCGC
ATCCGTTCTGGACAGGCGATCGCCGGATTGTGGACTCCGCCGGTCAGGTCGAGAAGTTCCGCAGGCGCTACGGGACTAGA
TAG

Upstream 100 bases:

>100_bases
ACGACCCGTTCGGCGACTGGCACGAGGATCCATGCGAGCACCTGTCCGAGGCAGAGGCTTTTCTCGCCTACGGCGACCAC
AACACAGAAGGGAACCACTG

Downstream 100 bases:

>100_bases
CCATGTCGGGTGCGACCCTGGTGCGGAATGCCGAGGGAATTCCGCACCAGGGTCGCTTTCGCTGAAAGGGACTAGGCGCG
AGCAGCACGGTTGACCGCCG

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKPGIHPDYHPVVFQDTTTGKMFLTRSTATSTRTVEWEGKEYPLITAEVTADSHPFWTGDRRIVDSAGQVEKFRRRYGTR

Sequences:

>Translated_80_residues
MKPGIHPDYHPVVFQDTTTGKMFLTRSTATSTRTVEWEGKEYPLITAEVTADSHPFWTGDRRIVDSAGQVEKFRRRYGTR
>Mature_80_residues
MKPGIHPDYHPVVFQDTTTGKMFLTRSTATSTRTVEWEGKEYPLITAEVTADSHPFWTGDRRIVDSAGQVEKFRRRYGTR

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=78, Percent_Identity=46.1538461538462, Blast_Score=79, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_MYCA9 (B1MFN5)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001701089.1
- ProteinModelPortal:   B1MFN5
- SMR:   B1MFN5
- EnsemblBacteria:   EBMYCT00000005226
- GeneID:   5962874
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_0336
- GeneTree:   EBGT00050000016607
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- BioCyc:   MABS561007:MAB_0336-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9216; Mature: 9216

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGIHPDYHPVVFQDTTTGKMFLTRSTATSTRTVEWEGKEYPLITAEVTADSHPFWTGD
CCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCEECCC
RRIVDSAGQVEKFRRRYGTR
CEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKPGIHPDYHPVVFQDTTTGKMFLTRSTATSTRTVEWEGKEYPLITAEVTADSHPFWTGD
CCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCEECCC
RRIVDSAGQVEKFRRRYGTR
CEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA