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The map label for this gene is pss [H]

Identifier: 169824278

GI number: 169824278

Start: 643287

End: 643919

Strand: Direct

Name: pss [H]

Synonym: FMG_0581

Alternate gene names: 169824278

Gene position: 643287-643919 (Clockwise)

Preceding gene: 169824277

Following gene: 169824279

Centisome position: 35.79

GC content: 29.54

Gene sequence:

>633_bases
ATGGACAATCGAGTAGATGAAATCCTTAAAAATAGCAAATTTAATCTTTTCATCAAAAGATTATTTGATATTTTGGCATC
TTTATTTGGAATATTGGTTATGGCAATCCCAATGATTATAATTTCCATAGCTATCAAACTAGATTCTAAAGGGCCTGTTT
TTTTCAAACAAAAAAGAGTTAAGAAAAATAATAAAGACTTTACGATTTTGAAATTTAGAACGATGGTTGTGGATGCACCA
AAATTGGGAATGGCAATAACGGTTGGAGACGATCCTAGAATAACTAAAGTAGGAAAGTTTTTGAGAAAAACTAAATTAGA
TGAGTTTCCACAATTATTCAATGTATTAATCGGTGATATGAGCTTTGTTGGTCCGAGACCAGAAGTGAGAAAATACGTCG
ACTTGTATTCCGATTCGGACAGAGATATTTTGAAAATCAGGCCAGGAATAACAGACCTAGCTAGTATAAAATACAGAGAT
GAATCTGAAATTTTGGACAAATCTGACAATCCTGAAAAGACATACGTTGAAGAAATTATGCCTAATAAAATCGAATTAAA
CAAACAATACATTGAAAATATTAATTTAATTAATGATATAAAAATAATTCTTCAAACATTGAAGATTTTATAA

Upstream 100 bases:

>100_bases
TACAAAAATGAAATAACATTACCACTTCACACATTATTATCAGATGATGAAGTAGCATATGTTATCGAAACTTACAAGGA
TATAGTTAGTGGTAAATAAT

Downstream 100 bases:

>100_bases
ATTATTAACTTGTATGAAATAAGAGAAGATTAAATGGGGGATTTTAATGAATATACCATTGTTGAATTTGAAAAGACAAT
ATAAAAACATTGAAGAAGAA

Product: putative glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MDNRVDEILKNSKFNLFIKRLFDILASLFGILVMAIPMIIISIAIKLDSKGPVFFKQKRVKKNNKDFTILKFRTMVVDAP
KLGMAITVGDDPRITKVGKFLRKTKLDEFPQLFNVLIGDMSFVGPRPEVRKYVDLYSDSDRDILKIRPGITDLASIKYRD
ESEILDKSDNPEKTYVEEIMPNKIELNKQYIENINLINDIKIILQTLKIL

Sequences:

>Translated_210_residues
MDNRVDEILKNSKFNLFIKRLFDILASLFGILVMAIPMIIISIAIKLDSKGPVFFKQKRVKKNNKDFTILKFRTMVVDAP
KLGMAITVGDDPRITKVGKFLRKTKLDEFPQLFNVLIGDMSFVGPRPEVRKYVDLYSDSDRDILKIRPGITDLASIKYRD
ESEILDKSDNPEKTYVEEIMPNKIELNKQYIENINLINDIKIILQTLKIL
>Mature_210_residues
MDNRVDEILKNSKFNLFIKRLFDILASLFGILVMAIPMIIISIAIKLDSKGPVFFKQKRVKKNNKDFTILKFRTMVVDAP
KLGMAITVGDDPRITKVGKFLRKTKLDEFPQLFNVLIGDMSFVGPRPEVRKYVDLYSDSDRDILKIRPGITDLASIKYRD
ESEILDKSDNPEKTYVEEIMPNKIELNKQYIENINLINDIKIILQTLKIL

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=200, Percent_Identity=36, Blast_Score=123, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 24281; Mature: 24281

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRVDEILKNSKFNLFIKRLFDILASLFGILVMAIPMIIISIAIKLDSKGPVFFKQKRV
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHH
KKNNKDFTILKFRTMVVDAPKLGMAITVGDDPRITKVGKFLRKTKLDEFPQLFNVLIGDM
HCCCCCEEEEEEEEHHEECCCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHH
SFVGPRPEVRKYVDLYSDSDRDILKIRPGITDLASIKYRDESEILDKSDNPEKTYVEEIM
HCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCHHHHHCCCCCCHHHHHHHHC
PNKIELNKQYIENINLINDIKIILQTLKIL
CCHHHHCHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNRVDEILKNSKFNLFIKRLFDILASLFGILVMAIPMIIISIAIKLDSKGPVFFKQKRV
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHH
KKNNKDFTILKFRTMVVDAPKLGMAITVGDDPRITKVGKFLRKTKLDEFPQLFNVLIGDM
HCCCCCEEEEEEEEHHEECCCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHH
SFVGPRPEVRKYVDLYSDSDRDILKIRPGITDLASIKYRDESEILDKSDNPEKTYVEEIM
HCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCHHHHHCCCCCCHHHHHHHHC
PNKIELNKQYIENINLINDIKIILQTLKIL
CCHHHHCHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2851702 [H]