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The map label for this gene is yfbE [C]

Identifier: 169824277

GI number: 169824277

Start: 642092

End: 643285

Strand: Direct

Name: yfbE [C]

Synonym: FMG_0580

Alternate gene names: 169824277

Gene position: 642092-643285 (Clockwise)

Preceding gene: 169824275

Following gene: 169824278

Centisome position: 35.72

GC content: 31.16

Gene sequence:

>1194_bases
ATGAACATTTTATTTTCACCACCTGATATTTCTGATAAAGAAATTGAAGAAGTGGTAGACGCATTAAAATCTGGTTGGAT
TACAACTGGACCAAAAACTAAACTATTAGAAAAAAAATTACAAGAATATACACAATCAAAAAAAACTTGTTGCTTTAATT
CAGCAACGGCTGCATTGGAATGTGCGCTTCGAATTTTGGGTGTAAATGGCAAGAAGGATGAATGTATTACTTCGGCTTAC
ACTTATACTGCAAGTTGTTCAGTTATTGATCATTTGGATGCTACGATTAAATTGGTAGACGTTCAGAAAGATTCCTACTT
TATGGATTATGATAAATTATATGATTCCATAAATGAAAATACTAAGGCTATTATTCCAGTTGATATCGCAGGAGTTCCTG
TTGATTACGATAAAATTTACGAAATTATTGAAGCTAAGAAATCTATATTCAGACCTTCAAACGAAATTCAAGAATCATTG
GGAAGAGTAGCTTTGATTTCAGATAGCGCTCATGCGTTAGGCTCAACTTATAAAGGCAAAAAAATTGGATCATTCCAAGA
TATTGCATCTTTTTCATTCCATGCTGTTAAAAACTTTACTACAGCTGAAGGTGGAATGCTATCGATAAATATTGGCGATG
TAGATAAGATTTACAATGATTTACAATTATACTCACTACATGGACAAAACAAAGATGCATTAGCCAAAACAAAATTAGGT
GCATGGGAATATGACATTAAAGGTCTTTATTACAAATACAATATGCCTGATATATTAGCAGCAATTGGGCTTGCACAATT
AGAAAGATATGATGATTTATTAGCTAGAAGAAAAGAAATAATCAAAATGTATAACGATGGCTTTGATAATACTTCTATTA
GTTATTTGAATCATTTTGGAAAAGATTATACAAGTAACGGTCATTTGTATTTAACAAGAGTCGAAGGTATTGATGAAGCA
ACTCGTAACGATATAATTGTCAAGATGGCAGAAAAAGGTATTGCTACGAATGTTCACTACAAACCAATTGCAATGATGAC
AGGATACAAGAATTTGGGATTTGATATAAAAGATTATCCTAATACTTTTGAACAATACAAAAATGAAATAACATTACCAC
TTCACACATTATTATCAGATGATGAAGTAGCATATGTTATCGAAACTTACAAGGATATAGTTAGTGGTAAATAA

Upstream 100 bases:

>100_bases
AAAAAGAATACTACAATTTGTCAACTTTTTCGTCATTTATATCTAAAAATTAGCAAATTAGTGGTATAATATATAGTTAG
TGAAATAAGGAGAGTTGTTT

Downstream 100 bases:

>100_bases
TATGGACAATCGAGTAGATGAAATCCTTAAAAATAGCAAATTTAATCTTTTCATCAAAAGATTATTTGATATTTTGGCAT
CTTTATTTGGAATATTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNILFSPPDISDKEIEEVVDALKSGWITTGPKTKLLEKKLQEYTQSKKTCCFNSATAALECALRILGVNGKKDECITSAY
TYTASCSVIDHLDATIKLVDVQKDSYFMDYDKLYDSINENTKAIIPVDIAGVPVDYDKIYEIIEAKKSIFRPSNEIQESL
GRVALISDSAHALGSTYKGKKIGSFQDIASFSFHAVKNFTTAEGGMLSINIGDVDKIYNDLQLYSLHGQNKDALAKTKLG
AWEYDIKGLYYKYNMPDILAAIGLAQLERYDDLLARRKEIIKMYNDGFDNTSISYLNHFGKDYTSNGHLYLTRVEGIDEA
TRNDIIVKMAEKGIATNVHYKPIAMMTGYKNLGFDIKDYPNTFEQYKNEITLPLHTLLSDDEVAYVIETYKDIVSGK

Sequences:

>Translated_397_residues
MNILFSPPDISDKEIEEVVDALKSGWITTGPKTKLLEKKLQEYTQSKKTCCFNSATAALECALRILGVNGKKDECITSAY
TYTASCSVIDHLDATIKLVDVQKDSYFMDYDKLYDSINENTKAIIPVDIAGVPVDYDKIYEIIEAKKSIFRPSNEIQESL
GRVALISDSAHALGSTYKGKKIGSFQDIASFSFHAVKNFTTAEGGMLSINIGDVDKIYNDLQLYSLHGQNKDALAKTKLG
AWEYDIKGLYYKYNMPDILAAIGLAQLERYDDLLARRKEIIKMYNDGFDNTSISYLNHFGKDYTSNGHLYLTRVEGIDEA
TRNDIIVKMAEKGIATNVHYKPIAMMTGYKNLGFDIKDYPNTFEQYKNEITLPLHTLLSDDEVAYVIETYKDIVSGK
>Mature_397_residues
MNILFSPPDISDKEIEEVVDALKSGWITTGPKTKLLEKKLQEYTQSKKTCCFNSATAALECALRILGVNGKKDECITSAY
TYTASCSVIDHLDATIKLVDVQKDSYFMDYDKLYDSINENTKAIIPVDIAGVPVDYDKIYEIIEAKKSIFRPSNEIQESL
GRVALISDSAHALGSTYKGKKIGSFQDIASFSFHAVKNFTTAEGGMLSINIGDVDKIYNDLQLYSLHGQNKDALAKTKLG
AWEYDIKGLYYKYNMPDILAAIGLAQLERYDDLLARRKEIIKMYNDGFDNTSISYLNHFGKDYTSNGHLYLTRVEGIDEA
TRNDIIVKMAEKGIATNVHYKPIAMMTGYKNLGFDIKDYPNTFEQYKNEITLPLHTLLSDDEVAYVIETYKDIVSGK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=394, Percent_Identity=33.248730964467, Blast_Score=196, Evalue=3e-51,
Organism=Escherichia coli, GI2367285, Length=394, Percent_Identity=27.1573604060914, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44625; Mature: 44625

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILFSPPDISDKEIEEVVDALKSGWITTGPKTKLLEKKLQEYTQSKKTCCFNSATAALE
CCCEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCHHHHHH
CALRILGVNGKKDECITSAYTYTASCSVIDHLDATIKLVDVQKDSYFMDYDKLYDSINEN
HHHHHCCCCCCCCHHHHHHEEEEEECHHHHCCCCEEEEEEECCCCEEECHHHHHHHHCCC
TKAIIPVDIAGVPVDYDKIYEIIEAKKSIFRPSNEIQESLGRVALISDSAHALGSTYKGK
CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCHHHHCCCCCCC
KIGSFQDIASFSFHAVKNFTTAEGGMLSINIGDVDKIYNDLQLYSLHGQNKDALAKTKLG
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCEEEEEECCCCCHHHHHHHCC
AWEYDIKGLYYKYNMPDILAAIGLAQLERYDDLLARRKEIIKMYNDGFDNTSISYLNHFG
CEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
KDYTSNGHLYLTRVEGIDEATRNDIIVKMAEKGIATNVHYKPIAMMTGYKNLGFDIKDYP
CCCCCCCCEEEEEECCCCCHHCCCEEEEECCCCCCCCCCCCCEEEECCCHHCCCCCCCCC
NTFEQYKNEITLPLHTLLSDDEVAYVIETYKDIVSGK
CHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNILFSPPDISDKEIEEVVDALKSGWITTGPKTKLLEKKLQEYTQSKKTCCFNSATAALE
CCCEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCHHHHHH
CALRILGVNGKKDECITSAYTYTASCSVIDHLDATIKLVDVQKDSYFMDYDKLYDSINEN
HHHHHCCCCCCCCHHHHHHEEEEEECHHHHCCCCEEEEEEECCCCEEECHHHHHHHHCCC
TKAIIPVDIAGVPVDYDKIYEIIEAKKSIFRPSNEIQESLGRVALISDSAHALGSTYKGK
CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCHHHHCCCCCCC
KIGSFQDIASFSFHAVKNFTTAEGGMLSINIGDVDKIYNDLQLYSLHGQNKDALAKTKLG
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCEEEEEECCCCCHHHHHHHCC
AWEYDIKGLYYKYNMPDILAAIGLAQLERYDDLLARRKEIIKMYNDGFDNTSISYLNHFG
CEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
KDYTSNGHLYLTRVEGIDEATRNDIIVKMAEKGIATNVHYKPIAMMTGYKNLGFDIKDYP
CCCCCCCCEEEEEECCCCCHHCCCEEEEECCCCCCCCCCCCCEEEECCCHHCCCCCCCCC
NTFEQYKNEITLPLHTLLSDDEVAYVIETYKDIVSGK
CHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]