Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is adk
Identifier: 167623529
GI number: 167623529
Start: 1916716
End: 1917360
Strand: Direct
Name: adk
Synonym: Shal_1598
Alternate gene names: 167623529
Gene position: 1916716-1917360 (Clockwise)
Preceding gene: 167623528
Following gene: 167623530
Centisome position: 36.67
GC content: 45.74
Gene sequence:
>645_bases ATGCGCATTATGCTATTAGGTGCCCCAGGTGCCGGTAAAGGTACTCAAGCCCAATTCATCATGGAAAAGTACGGTGTTCC TCAAATTTCTACAGGCGACATGCTACGTGCAGCGGTAAAAGCAGGCACACCACTAGGCTTAGAAGCTAAGAAAGTCATGG ATGCTGGTCAGTTGGTTTCTGATGAGCTAATTATTGGCCTAGTAAAAGAGCGTGTTGCACAAGATGATTGCGCTGCAGGT TTCCTATTAGACGGTTTCCCTCGTACTATTCCACAAGCAGATGCTATGGCTTCAAGCGGTATTGCACTTGATCACGTGAT TGAAATTGATGTGCCAGACGAAGAGATCGTTAAGCGTATGAGCGGTCGTCGTGTTCACCCTGGTTCTGGCCGTGTTTACC ACATTGTCTTTAACCAACCAAAAGTTGAAGGTAAAGATGACGTGACCGGTGAAGACCTAGCTATTCGTCCTGATGATGAA GAATCAACAGTACGTAAGCGTCTTGATATTTATCATGAACAAACTAAGCCACTAGTAGAATACTACGGCGCGGTTGCAGC TAAAGGTGACGTGACGTATAACAAGTTTGACGGCACTCAGTCAGTTGCTACCGTTAGCGATGAGATCGTTGCAGTACTAA GCTAA
Upstream 100 bases:
>100_bases ATCGCCGCACTAAATATAATAATACCCATCGACTAGACAGCTTTTTGCTTATTCTAGGCGGATGTCGGTATCACAGTGCG AAATTAAGAGGAAGATTCAG
Downstream 100 bases:
>100_bases ACTGATACTCAATTAACTTGGTACACGTTTATTTGGCAGTAAGCTAAATAAAGCTTAACTAACAATGTGTTTATGAGCTA GTTCTCATATTTTAAAAAGC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRIMLLGAPGAGKGTQAQFIMEKYGVPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDELIIGLVKERVAQDDCAAG FLLDGFPRTIPQADAMASSGIALDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHIVFNQPKVEGKDDVTGEDLAIRPDDE ESTVRKRLDIYHEQTKPLVEYYGAVAAKGDVTYNKFDGTQSVATVSDEIVAVLS
Sequences:
>Translated_214_residues MRIMLLGAPGAGKGTQAQFIMEKYGVPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDELIIGLVKERVAQDDCAAG FLLDGFPRTIPQADAMASSGIALDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHIVFNQPKVEGKDDVTGEDLAIRPDDE ESTVRKRLDIYHEQTKPLVEYYGAVAAKGDVTYNKFDGTQSVATVSDEIVAVLS >Mature_214_residues MRIMLLGAPGAGKGTQAQFIMEKYGVPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDELIIGLVKERVAQDDCAAG FLLDGFPRTIPQADAMASSGIALDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHIVFNQPKVEGKDDVTGEDLAIRPDDE ESTVRKRLDIYHEQTKPLVEYYGAVAAKGDVTYNKFDGTQSVATVSDEIVAVLS
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI7524346, Length=218, Percent_Identity=46.3302752293578, Blast_Score=195, Evalue=3e-50, Organism=Homo sapiens, GI4502013, Length=218, Percent_Identity=46.3302752293578, Blast_Score=195, Evalue=3e-50, Organism=Homo sapiens, GI19923437, Length=182, Percent_Identity=44.5054945054945, Blast_Score=161, Evalue=4e-40, Organism=Homo sapiens, GI310110345, Length=201, Percent_Identity=39.3034825870647, Blast_Score=141, Evalue=3e-34, Organism=Homo sapiens, GI53832003, Length=201, Percent_Identity=39.3034825870647, Blast_Score=141, Evalue=3e-34, Organism=Homo sapiens, GI8051579, Length=201, Percent_Identity=39.3034825870647, Blast_Score=141, Evalue=3e-34, Organism=Homo sapiens, GI53832001, Length=201, Percent_Identity=39.3034825870647, Blast_Score=141, Evalue=3e-34, Organism=Homo sapiens, GI4502011, Length=181, Percent_Identity=31.4917127071823, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI22749187, Length=206, Percent_Identity=28.6407766990291, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI7706497, Length=222, Percent_Identity=28.3783783783784, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI28144897, Length=181, Percent_Identity=27.6243093922652, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI28144899, Length=181, Percent_Identity=27.6243093922652, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI21450759, Length=139, Percent_Identity=26.6187050359712, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI237858799, Length=138, Percent_Identity=26.8115942028986, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1786680, Length=213, Percent_Identity=68.5446009389671, Blast_Score=301, Evalue=2e-83, Organism=Caenorhabditis elegans, GI17552384, Length=186, Percent_Identity=47.3118279569892, Blast_Score=180, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17537943, Length=184, Percent_Identity=33.695652173913, Blast_Score=119, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17567503, Length=182, Percent_Identity=34.0659340659341, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6320432, Length=218, Percent_Identity=46.3302752293578, Blast_Score=200, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321018, Length=196, Percent_Identity=41.3265306122449, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6322828, Length=184, Percent_Identity=28.2608695652174, Blast_Score=87, Evalue=2e-18, Organism=Drosophila melanogaster, GI22026816, Length=184, Percent_Identity=51.0869565217391, Blast_Score=191, Evalue=3e-49, Organism=Drosophila melanogaster, GI17737899, Length=182, Percent_Identity=43.4065934065934, Blast_Score=152, Evalue=1e-37, Organism=Drosophila melanogaster, GI24645822, Length=182, Percent_Identity=43.4065934065934, Blast_Score=152, Evalue=1e-37, Organism=Drosophila melanogaster, GI17647141, Length=181, Percent_Identity=29.2817679558011, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24663208, Length=181, Percent_Identity=29.2817679558011, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI221459597, Length=184, Percent_Identity=26.6304347826087, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI21356893, Length=184, Percent_Identity=26.6304347826087, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_SHEHH (B0TP07)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673823.1 - ProteinModelPortal: B0TP07 - SMR: B0TP07 - GeneID: 5906506 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_1598 - HOGENOM: HBG630208 - OMA: RTYHVKY - ProtClustDB: PRK00279 - BioCyc: SHAL458817:SHAL_1598-MONOMER - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid
EC number: =2.7.4.3
Molecular weight: Translated: 23070; Mature: 23070
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIMLLGAPGAGKGTQAQFIMEKYGVPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DELIIGLVKERVAQDDCAAGFLLDGFPRTIPQADAMASSGIALDHVIEIDVPDEEIVKRM HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCCEEEEEEEEECCHHHHHHHH SGRRVHPGSGRVYHIVFNQPKVEGKDDVTGEDLAIRPDDEESTVRKRLDIYHEQTKPLVE HCCEECCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCHHHHH YYGAVAAKGDVTYNKFDGTQSVATVSDEIVAVLS HHHHHCCCCCCEEEECCCCCHHHHHHHHHHEECC >Mature Secondary Structure MRIMLLGAPGAGKGTQAQFIMEKYGVPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DELIIGLVKERVAQDDCAAGFLLDGFPRTIPQADAMASSGIALDHVIEIDVPDEEIVKRM HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCCEEEEEEEEECCHHHHHHHH SGRRVHPGSGRVYHIVFNQPKVEGKDDVTGEDLAIRPDDEESTVRKRLDIYHEQTKPLVE HCCEECCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCHHHHH YYGAVAAKGDVTYNKFDGTQSVATVSDEIVAVLS HHHHHCCCCCCEEEECCCCCHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA