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The map label for this gene is ybbN [H]

Identifier: 167623528

GI number: 167623528

Start: 1915690

End: 1916535

Strand: Direct

Name: ybbN [H]

Synonym: Shal_1597

Alternate gene names: 167623528

Gene position: 1915690-1916535 (Clockwise)

Preceding gene: 167623527

Following gene: 167623529

Centisome position: 36.65

GC content: 44.56

Gene sequence:

>846_bases
ATGGAATCGATTCTAGAACTGACTAAAGAAAATATTCAGCAAGTGGTTGATGCCTCGATGGAGCAGGTCGTTGTGATGGC
TTTTTGGGCAAGTCAAAGCCCTGAGAGTTTAGCATTGATGCAAACCCTTGAGAGTATTACACAGCAACAAGCGGGTCGTT
TTGTTCTGGCTAAAGTTAACTGTGAAACTGAAATGGAGATCGCTAACTATTTCCAGATCCAAAGTTTGCCAACAACCTTA
GTGTTGCATGAAGGCAAACCGGTAGATGGTTTTGCTGGTGTACAAGAAGCGCCGCAGATCCTAGAGATGCTAGATAAGCA
TTTGCCTGCTCAGTGGCAATTAAAACTCAATCAAGCACGAGTATTTCTAGCCGAGCAAAATGCCATTGGCGCTTTGCCTT
TGTTAAAAGAGGCTTATAGCGATAAACCACTTGCGGAAATCGCCTTAGCATTAGCCGATGTTTATCTGTCATTGGGCGTG
CTTGAAGATGCCAAAGGACTGCTCGACTCAGTCGGTCTTGCGGATCAAGACAGTTATTATCAAAGCCTCAAAGCAAAGCT
TGCCTTAGCACTCGATGCCGCCGATACGCCTGAGATTAGAAAGTTGCAGCAAGATGTAGACAATGCCCCTGATAACTTAG
CCCTAGTGTTAGAGTTAGCCAAAGCGCTGCATCAAGCTGGGCGTAACGATGAAGCCTTAGACCTGTTATTTACGCCATTG
CAAAAAGATGTATCGGCATTGGACGGTAAGGTGAAGGGGTTATTTTTAGAGATCCTAACGGCTTTAGGTCAAGGTAACAG
TTTGGCAAATCAGTATCGGCGCAAGCTTTACACCTTACTTTATTAA

Upstream 100 bases:

>100_bases
TTAGCTAGCGTTAAGTAATTAGCAGCTATGATTAAAGGGGCAGTTACACTGCCTCTTTTTTATGGTCCAGATAAGTTCAG
GCGAAAGCGAAAGGAAAGTT

Downstream 100 bases:

>100_bases
TTCGTGTCAAAGTTTTTTTCAGCTGACTGATGCTAAAGTCGAATGAAAATAACTTCAAAATAGCGGCCATTTATGCGAAG
ATCGCCGCACTAAATATAAT

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MESILELTKENIQQVVDASMEQVVVMAFWASQSPESLALMQTLESITQQQAGRFVLAKVNCETEMEIANYFQIQSLPTTL
VLHEGKPVDGFAGVQEAPQILEMLDKHLPAQWQLKLNQARVFLAEQNAIGALPLLKEAYSDKPLAEIALALADVYLSLGV
LEDAKGLLDSVGLADQDSYYQSLKAKLALALDAADTPEIRKLQQDVDNAPDNLALVLELAKALHQAGRNDEALDLLFTPL
QKDVSALDGKVKGLFLEILTALGQGNSLANQYRRKLYTLLY

Sequences:

>Translated_281_residues
MESILELTKENIQQVVDASMEQVVVMAFWASQSPESLALMQTLESITQQQAGRFVLAKVNCETEMEIANYFQIQSLPTTL
VLHEGKPVDGFAGVQEAPQILEMLDKHLPAQWQLKLNQARVFLAEQNAIGALPLLKEAYSDKPLAEIALALADVYLSLGV
LEDAKGLLDSVGLADQDSYYQSLKAKLALALDAADTPEIRKLQQDVDNAPDNLALVLELAKALHQAGRNDEALDLLFTPL
QKDVSALDGKVKGLFLEILTALGQGNSLANQYRRKLYTLLY
>Mature_281_residues
MESILELTKENIQQVVDASMEQVVVMAFWASQSPESLALMQTLESITQQQAGRFVLAKVNCETEMEIANYFQIQSLPTTL
VLHEGKPVDGFAGVQEAPQILEMLDKHLPAQWQLKLNQARVFLAEQNAIGALPLLKEAYSDKPLAEIALALADVYLSLGV
LEDAKGLLDSVGLADQDSYYQSLKAKLALALDAADTPEIRKLQQDVDNAPDNLALVLELAKALHQAGRNDEALDLLFTPL
QKDVSALDGKVKGLFLEILTALGQGNSLANQYRRKLYTLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=282, Percent_Identity=45.3900709219858, Blast_Score=236, Evalue=9e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 30891; Mature: 30891

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESILELTKENIQQVVDASMEQVVVMAFWASQSPESLALMQTLESITQQQAGRFVLAKVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
CETEMEIANYFQIQSLPTTLVLHEGKPVDGFAGVQEAPQILEMLDKHLPAQWQLKLNQAR
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHE
VFLAEQNAIGALPLLKEAYSDKPLAEIALALADVYLSLGVLEDAKGLLDSVGLADQDSYY
EEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QSLKAKLALALDAADTPEIRKLQQDVDNAPDNLALVLELAKALHQAGRNDEALDLLFTPL
HHHHHHHHHEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QKDVSALDGKVKGLFLEILTALGQGNSLANQYRRKLYTLLY
HHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MESILELTKENIQQVVDASMEQVVVMAFWASQSPESLALMQTLESITQQQAGRFVLAKVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
CETEMEIANYFQIQSLPTTLVLHEGKPVDGFAGVQEAPQILEMLDKHLPAQWQLKLNQAR
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHE
VFLAEQNAIGALPLLKEAYSDKPLAEIALALADVYLSLGVLEDAKGLLDSVGLADQDSYY
EEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QSLKAKLALALDAADTPEIRKLQQDVDNAPDNLALVLELAKALHQAGRNDEALDLLFTPL
HHHHHHHHHEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QKDVSALDGKVKGLFLEILTALGQGNSLANQYRRKLYTLLY
HHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]