| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is envZ [H]
Identifier: 167622180
GI number: 167622180
Start: 286906
End: 288165
Strand: Reverse
Name: envZ [H]
Synonym: Shal_0239
Alternate gene names: 167622180
Gene position: 288165-286906 (Counterclockwise)
Preceding gene: 167622181
Following gene: 167622176
Centisome position: 5.51
GC content: 47.78
Gene sequence:
>1260_bases ATGCTAATTGGCTGCCTGCTGCTAACAAACCAACTAGTGTCATACATCTCTGTTGCGGTTTACTTTATAAAACCCAGCTA TCAGCAGATAAACCAATTGATAGCACGGCAAGTGAAGCTATTATTTGTTGGCGGCATCGATATTGGTCGTGAACACCTCA CCATGGTCGATGCCCTCAACGCCAAAGTGCGTGATGACACCATGCAGTTTTATAACCTAAAACAAGCTCGCCAAGCCGGT ATCGATCGTGCGACTTACTACAGTTTTTTATCTTCTCAAATGTCCGAATACCTAGGTGGCGAGGCTGAAGTGCGCATCGC TCAGGGGGAAGAATTTGAGATCTGGATCCGCCCTCCTCAAGCGCCCTCAATCTGGATCAGAGTGCCATTAACCGGGCTCA ATGAGAAAAACCTTTCACCGCTTACCCTATATTTAATGGTTATTGGCGCCCTAAGCGTGGCCGGAGGCTGGTGGTTTGCC CGGCAACAGAATCGTCCGTTGAGGCGATTACAAAAAGCGGCGATTGCCGTATCACGAGGTGATTACCCTGACCCTTTACC ATTGAGTGGCTCAACAGAGATTGTTGAGGTGACTAACACCTTCAATCAGATGTCTCATAGCATGAAGCAGCTGGAGCAAG ATAGGGCGCTGCTGATGGCTGGCATATCTCATGACTTACGTACCCCGCTAACTCGCATTCGACTGGCCTCTGAAATGATG GTCGAAGAAGATCAGTATCTGAAAGATGGCATAGTTAACGATATCGAAGATATGGATGCCATCATCAATCAGTTCATCTC CTATATCCGCCAAGATCAGGAAGGCACTCGAGAGTTAGAGCAGATAAACGACTTAATTCAAGATGTGATTCAGGCCGAAT CTAACCGTGAGGGCAGCATCGATTCAGAGTTAGTTGAGTGTCCACGCATTCCGATGCAAGGTATTGCCGTAAAACGTGTG CTCAGCAATTTAGTCGAAAATGCCTACCGCTACGGTAACGGCTGGGTAAGAATTAACTCACAATTTAATGGTCAGTACGT CGGCTTTAGTGTCGAAGATAACGGTCCTGGGATCGATGAAGAGCAGATCCCTAAACTCTTTCAACCTTTTACTCAAGGTG ATACGGCCCGCGGCAGTGTTGGCTCAGGGCTTGGTCTGGCGATTATCAAACGTATTGTCGATAGGCATCAGGGCAAGGTG ATCCTTACCAACCGCAGTGAAGGTGGATTGCATGCTCAGGTCTGGTTGCCGATTGAATAA
Upstream 100 bases:
>100_bases AATAGCTAGGCGACGATAACTAAGTGATAATAACTAAGTGGCTATAAACAGACGATGGTGGCAACGCTTTTTGCCACGCA GTTCCTTCAGCCAAACCGTA
Downstream 100 bases:
>100_bases CCTCTAATTAACGGTTATTAATTGCGACACTATTACCCATAATAGTCAGAATTATCAACTTCTAATAATAGGGGCGACCT CTGGCCTTTCATATTGACGA
Product: osmolarity sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MLIGCLLLTNQLVSYISVAVYFIKPSYQQINQLIARQVKLLFVGGIDIGREHLTMVDALNAKVRDDTMQFYNLKQARQAG IDRATYYSFLSSQMSEYLGGEAEVRIAQGEEFEIWIRPPQAPSIWIRVPLTGLNEKNLSPLTLYLMVIGALSVAGGWWFA RQQNRPLRRLQKAAIAVSRGDYPDPLPLSGSTEIVEVTNTFNQMSHSMKQLEQDRALLMAGISHDLRTPLTRIRLASEMM VEEDQYLKDGIVNDIEDMDAIINQFISYIRQDQEGTRELEQINDLIQDVIQAESNREGSIDSELVECPRIPMQGIAVKRV LSNLVENAYRYGNGWVRINSQFNGQYVGFSVEDNGPGIDEEQIPKLFQPFTQGDTARGSVGSGLGLAIIKRIVDRHQGKV ILTNRSEGGLHAQVWLPIE
Sequences:
>Translated_419_residues MLIGCLLLTNQLVSYISVAVYFIKPSYQQINQLIARQVKLLFVGGIDIGREHLTMVDALNAKVRDDTMQFYNLKQARQAG IDRATYYSFLSSQMSEYLGGEAEVRIAQGEEFEIWIRPPQAPSIWIRVPLTGLNEKNLSPLTLYLMVIGALSVAGGWWFA RQQNRPLRRLQKAAIAVSRGDYPDPLPLSGSTEIVEVTNTFNQMSHSMKQLEQDRALLMAGISHDLRTPLTRIRLASEMM VEEDQYLKDGIVNDIEDMDAIINQFISYIRQDQEGTRELEQINDLIQDVIQAESNREGSIDSELVECPRIPMQGIAVKRV LSNLVENAYRYGNGWVRINSQFNGQYVGFSVEDNGPGIDEEQIPKLFQPFTQGDTARGSVGSGLGLAIIKRIVDRHQGKV ILTNRSEGGLHAQVWLPIE >Mature_419_residues MLIGCLLLTNQLVSYISVAVYFIKPSYQQINQLIARQVKLLFVGGIDIGREHLTMVDALNAKVRDDTMQFYNLKQARQAG IDRATYYSFLSSQMSEYLGGEAEVRIAQGEEFEIWIRPPQAPSIWIRVPLTGLNEKNLSPLTLYLMVIGALSVAGGWWFA RQQNRPLRRLQKAAIAVSRGDYPDPLPLSGSTEIVEVTNTFNQMSHSMKQLEQDRALLMAGISHDLRTPLTRIRLASEMM VEEDQYLKDGIVNDIEDMDAIINQFISYIRQDQEGTRELEQINDLIQDVIQAESNREGSIDSELVECPRIPMQGIAVKRV LSNLVENAYRYGNGWVRINSQFNGQYVGFSVEDNGPGIDEEQIPKLFQPFTQGDTARGSVGSGLGLAIIKRIVDRHQGKV ILTNRSEGGLHAQVWLPIE
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=422, Percent_Identity=43.1279620853081, Blast_Score=347, Evalue=8e-97, Organism=Escherichia coli, GI1790346, Length=274, Percent_Identity=28.4671532846715, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1788393, Length=289, Percent_Identity=26.643598615917, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1790551, Length=270, Percent_Identity=29.2592592592593, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787894, Length=355, Percent_Identity=25.0704225352113, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=32.4324324324324, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87082128, Length=254, Percent_Identity=27.5590551181102, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1786600, Length=209, Percent_Identity=30.1435406698565, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790861, Length=286, Percent_Identity=26.2237762237762, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI48994928, Length=224, Percent_Identity=26.7857142857143, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788549, Length=230, Percent_Identity=30, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788279, Length=258, Percent_Identity=25.5813953488372, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786783, Length=287, Percent_Identity=25.0871080139373, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI145693157, Length=248, Percent_Identity=25, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790436, Length=226, Percent_Identity=25.6637168141593, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87081816, Length=251, Percent_Identity=25.8964143426295, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788713, Length=272, Percent_Identity=23.8970588235294, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1787374, Length=280, Percent_Identity=24.6428571428571, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789403, Length=278, Percent_Identity=26.2589928057554, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790300, Length=251, Percent_Identity=27.4900398406374, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47172; Mature: 47172
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGCLLLTNQLVSYISVAVYFIKPSYQQINQLIARQVKLLFVGGIDIGREHLTMVDALN CEEHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHC AKVRDDTMQFYNLKQARQAGIDRATYYSFLSSQMSEYLGGEAEVRIAQGEEFEIWIRPPQ CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCC APSIWIRVPLTGLNEKNLSPLTLYLMVIGALSVAGGWWFARQQNRPLRRLQKAAIAVSRG CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCC DYPDPLPLSGSTEIVEVTNTFNQMSHSMKQLEQDRALLMAGISHDLRTPLTRIRLASEMM CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VEEDQYLKDGIVNDIEDMDAIINQFISYIRQDQEGTRELEQINDLIQDVIQAESNREGSI HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DSELVECPRIPMQGIAVKRVLSNLVENAYRYGNGWVRINSQFNGQYVGFSVEDNGPGIDE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCH EQIPKLFQPFTQGDTARGSVGSGLGLAIIKRIVDRHQGKVILTNRSEGGLHAQVWLPIE HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECC >Mature Secondary Structure MLIGCLLLTNQLVSYISVAVYFIKPSYQQINQLIARQVKLLFVGGIDIGREHLTMVDALN CEEHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHC AKVRDDTMQFYNLKQARQAGIDRATYYSFLSSQMSEYLGGEAEVRIAQGEEFEIWIRPPQ CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCC APSIWIRVPLTGLNEKNLSPLTLYLMVIGALSVAGGWWFARQQNRPLRRLQKAAIAVSRG CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCC DYPDPLPLSGSTEIVEVTNTFNQMSHSMKQLEQDRALLMAGISHDLRTPLTRIRLASEMM CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VEEDQYLKDGIVNDIEDMDAIINQFISYIRQDQEGTRELEQINDLIQDVIQAESNREGSI HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DSELVECPRIPMQGIAVKRVLSNLVENAYRYGNGWVRINSQFNGQYVGFSVEDNGPGIDE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCH EQIPKLFQPFTQGDTARGSVGSGLGLAIIKRIVDRHQGKVILTNRSEGGLHAQVWLPIE HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]