| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is modA [H]
Identifier: 167622068
GI number: 167622068
Start: 142648
End: 143427
Strand: Direct
Name: modA [H]
Synonym: Shal_0127
Alternate gene names: 167622068
Gene position: 142648-143427 (Clockwise)
Preceding gene: 167622067
Following gene: 167622069
Centisome position: 2.73
GC content: 49.23
Gene sequence:
>780_bases ATGAAGTTTAGGGTTATGGTGCTTGCTCTATTGCTGCCCTTTTTAGCAATAAGTAACGGCGCGTCAGCGGCGCAAGATGT ACCAGCGATAGCTGCGGCATCGAGTATTAAGTTTGCCCTCGATGATATTGCCAAACAATTTACCCAAGAGACTGGGCGCA AAGTGCGGATCTCCTATGGTTCCTCTGGCAATTTTGTTGCCCAGATCCGACATGGAGCCCCATTTGAGCTGTTCCTTTCT GCCGACGAGCGTTATATCAAGCAGCTGACTATGGCTAAGCAGACACTCGATGATGGCGTGGTTTATGCGGTAGGTCAGCT TGCGATTGCCGCGCCTAAGTCGTCGCCATTAACCTTAGACCCTGACTTAGAGGGGCTTAAGCAGTTGATGGCCGCAAACC AGCTAAAACGTTTTGCGATAGCCAATCCTGATCATGCTCCTTACGGTGAGCGTGCCGAAGAGGTGCTTAAAAAATTAGGG CTGTGGCAGCCGATTCAACCATATCTGGTGTTTGGTGAAAACGTGTCTCAAGCGGCGCAATTTGCCGTGAGCGGTGCGAC TCAAGGTGGTATCGTTGCCTTGTCGCTGGCCGTGGCAAAACCTTTCGAAGCGCGTGCTAACTACGTAGTGATCCCGCAAA AATACTATACACCATTGGATCAGCGTATGGTGCTAACCTTAAAAGCGGGTGAAACGGCCAAGCTATTTTATACCTATCTG CAGTCTGAACAGGCTCAAGGTGTATTTGCTAATTATGGCTTTTCGAGAGCGATGAATTAA
Upstream 100 bases:
>100_bases AGGCGCAAACTGGGTTGAAGCCCGTGACGCCGATGAACAAGCCGCAAAAATGTGGGATAAAAAAGCGTAGCAAACGCTTT AATTCAAGGAGTTCAGCTCA
Downstream 100 bases:
>100_bases TGGATTGGGAAGCGTTATTGCTATCGATTAAGCTCAGTAGTGTGACTGTGCTTATCTTGATCCCGCTGGCAATTTTAGCG GGACGCTTTTTGGCTTATCG
Product: molybdenum ABC transporter periplasmic molybdate-binding protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKFRVMVLALLLPFLAISNGASAAQDVPAIAAASSIKFALDDIAKQFTQETGRKVRISYGSSGNFVAQIRHGAPFELFLS ADERYIKQLTMAKQTLDDGVVYAVGQLAIAAPKSSPLTLDPDLEGLKQLMAANQLKRFAIANPDHAPYGERAEEVLKKLG LWQPIQPYLVFGENVSQAAQFAVSGATQGGIVALSLAVAKPFEARANYVVIPQKYYTPLDQRMVLTLKAGETAKLFYTYL QSEQAQGVFANYGFSRAMN
Sequences:
>Translated_259_residues MKFRVMVLALLLPFLAISNGASAAQDVPAIAAASSIKFALDDIAKQFTQETGRKVRISYGSSGNFVAQIRHGAPFELFLS ADERYIKQLTMAKQTLDDGVVYAVGQLAIAAPKSSPLTLDPDLEGLKQLMAANQLKRFAIANPDHAPYGERAEEVLKKLG LWQPIQPYLVFGENVSQAAQFAVSGATQGGIVALSLAVAKPFEARANYVVIPQKYYTPLDQRMVLTLKAGETAKLFYTYL QSEQAQGVFANYGFSRAMN >Mature_259_residues MKFRVMVLALLLPFLAISNGASAAQDVPAIAAASSIKFALDDIAKQFTQETGRKVRISYGSSGNFVAQIRHGAPFELFLS ADERYIKQLTMAKQTLDDGVVYAVGQLAIAAPKSSPLTLDPDLEGLKQLMAANQLKRFAIANPDHAPYGERAEEVLKKLG LWQPIQPYLVFGENVSQAAQFAVSGATQGGIVALSLAVAKPFEARANYVVIPQKYYTPLDQRMVLTLKAGETAKLFYTYL QSEQAQGVFANYGFSRAMN
Specific function: Involved in the transport of molybdenum into the cell [H]
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein modA family [H]
Homologues:
Organism=Escherichia coli, GI1786979, Length=248, Percent_Identity=31.8548387096774, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005950 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 28157; Mature: 28157
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRVMVLALLLPFLAISNGASAAQDVPAIAAASSIKFALDDIAKQFTQETGRKVRISYG CCHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC SSGNFVAQIRHGAPFELFLSADERYIKQLTMAKQTLDDGVVYAVGQLAIAAPKSSPLTLD CCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHEEECCEEEECCCCCCCEEC PDLEGLKQLMAANQLKRFAIANPDHAPYGERAEEVLKKLGLWQPIQPYLVFGENVSQAAQ CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHH FAVSGATQGGIVALSLAVAKPFEARANYVVIPQKYYTPLDQRMVLTLKAGETAKLFYTYL HHHCCCCCCCEEEEEEHHHCCHHHCCCEEEECHHHCCCCCCEEEEEEECCCHHHHHHHHH QSEQAQGVFANYGFSRAMN HCCCCCCHHHHCCHHHCCC >Mature Secondary Structure MKFRVMVLALLLPFLAISNGASAAQDVPAIAAASSIKFALDDIAKQFTQETGRKVRISYG CCHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC SSGNFVAQIRHGAPFELFLSADERYIKQLTMAKQTLDDGVVYAVGQLAIAAPKSSPLTLD CCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHEEECCEEEECCCCCCCEEC PDLEGLKQLMAANQLKRFAIANPDHAPYGERAEEVLKKLGLWQPIQPYLVFGENVSQAAQ CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHH FAVSGATQGGIVALSLAVAKPFEARANYVVIPQKYYTPLDQRMVLTLKAGETAKLFYTYL HHHCCCCCCCEEEEEEHHHCCHHHCCCEEEECHHHCCCCCCEEEEEEECCCHHHHHHHHH QSEQAQGVFANYGFSRAMN HCCCCCCHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8491722 [H]