| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is modB [H]
Identifier: 167622069
GI number: 167622069
Start: 143427
End: 144107
Strand: Direct
Name: modB [H]
Synonym: Shal_0128
Alternate gene names: 167622069
Gene position: 143427-144107 (Clockwise)
Preceding gene: 167622068
Following gene: 167622070
Centisome position: 2.74
GC content: 49.63
Gene sequence:
>681_bases ATGGATTGGGAAGCGTTATTGCTATCGATTAAGCTCAGTAGTGTGACTGTGCTTATCTTGATCCCGCTGGCAATTTTAGC GGGACGCTTTTTGGCTTATCGACATTTTCCCGGTAAGTCTTGGGTCGAAGCCTTGGTGATGGTGCCGCTGGTGCTACCTC CAACGGTGATCGGCTACTATCTACTGGTGGGGCTCGGTAGTGAGTCATGGCTCGGTCGAATGCTAGAACAACTACTTGGC CACCAATTGGTATTTCACTTCTCCGGCTTAGTCGTCGCCTCCATCCTCGTTAATATTCCTTTTGCGATTCAGCCGATCCA ACGCGCCTTTGAAGCGGTACCTGAAGATGTACGTGATGCGGCGGCTTGCTGTGGTATGAGTCGCTTGAAAGTGCTATTTA AAATTGAACTGCCTATGGTCTGGCCCGGCGTGTTAACCGCAATGGTATTGTGTTTTTCTCATGTTCTCGGTGAGTTTGGC GTGGTACTGATGATGGGCGGTAATATTGCCGGTGAGACTAAGACCATTGCTATCTCTATCTATGATAGCGTGCAGGCGTT TGATTTTGCCAGCGCGGGCAATATGTCTCTGGTATTACTGCTGTTTGCGATTACCGTACTGGCGTTAACGACAAGTCTAT CGCGTCGTGTTGGAGGACAGTATGTCGCAAAGCGTCGCTGA
Upstream 100 bases:
>100_bases TAAAAGCGGGTGAAACGGCCAAGCTATTTTATACCTATCTGCAGTCTGAACAGGCTCAAGGTGTATTTGCTAATTATGGC TTTTCGAGAGCGATGAATTA
Downstream 100 bases:
>100_bases TCTATATTGTCGTATAAAACAGACTAAACACATTAAATTAGATGCCGAGTTCAGTTGTAAGGCTGGCGAGGTCTTAGCGG TTGTTGGCCCATCAGGGGGC
Product: molybdate ABC transporter inner membrane subunit
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYYLLVGLGSESWLGRMLEQLLG HQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDAAACCGMSRLKVLFKIELPMVWPGVLTAMVLCFSHVLGEFG VVLMMGGNIAGETKTIAISIYDSVQAFDFASAGNMSLVLLLFAITVLALTTSLSRRVGGQYVAKRR
Sequences:
>Translated_226_residues MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYYLLVGLGSESWLGRMLEQLLG HQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDAAACCGMSRLKVLFKIELPMVWPGVLTAMVLCFSHVLGEFG VVLMMGGNIAGETKTIAISIYDSVQAFDFASAGNMSLVLLLFAITVLALTTSLSRRVGGQYVAKRR >Mature_226_residues MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYYLLVGLGSESWLGRMLEQLLG HQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDAAACCGMSRLKVLFKIELPMVWPGVLTAMVLCFSHVLGEFG VVLMMGGNIAGETKTIAISIYDSVQAFDFASAGNMSLVLLLFAITVLALTTSLSRRVGGQYVAKRR
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=224, Percent_Identity=34.8214285714286, Blast_Score=116, Evalue=9e-28, Organism=Escherichia coli, GI1788764, Length=190, Percent_Identity=29.4736842105263, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI87082099, Length=219, Percent_Identity=27.8538812785388, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786254, Length=220, Percent_Identity=26.3636363636364, Blast_Score=67, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24605; Mature: 24605
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYY CCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH LLVGLGSESWLGRMLEQLLGHQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH AACCGMSRLKVLFKIELPMVWPGVLTAMVLCFSHVLGEFGVVLMMGGNIAGETKTIAISI HHHCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE YDSVQAFDFASAGNMSLVLLLFAITVLALTTSLSRRVGGQYVAKRR ECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYY CCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH LLVGLGSESWLGRMLEQLLGHQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH AACCGMSRLKVLFKIELPMVWPGVLTAMVLCFSHVLGEFGVVLMMGGNIAGETKTIAISI HHHCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE YDSVQAFDFASAGNMSLVLLLFAITVLALTTSLSRRVGGQYVAKRR ECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]