Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167622039
Identifier: 167622039
GI number: 167622039
Start: 110298
End: 111203
Strand: Reverse
Name: 167622039
Synonym: Shal_0098
Alternate gene names: NA
Gene position: 111203-110298 (Counterclockwise)
Preceding gene: 167622040
Following gene: 167622036
Centisome position: 2.13
GC content: 48.12
Gene sequence:
>906_bases ATGACTGAGCCGACTGACCTGATCTATATGAGTGCCAAACAGGTATCTGAGTACCTAGATCTCAATGAGAAGAAAGTCTA CTCAATGGCCAACGATCGGATTCTACCCGCGACTAAAATCACTGGTAAGTGGCTGTTTCCAAAAATTTTGATCGACAGAT GGGTAATGGACTCCTGTCACAGCGGTATGCTGTCTGACCGTATGCACATCACAGGTAGTGATGACCCTCTGCTATCGATG CTTGTGGCAAGAATGATGTCGCAGGTAGGTAAAAGTGAACTGATCAGCTACAGTTCTACAGGTTCACGCTTAGGTCTAGA CTTACTATCCCGAGGTTACGCCGATGTGTGCACTCTGCACTGGGGCAGTGTCGAGGAGCGTAGTGTACGTCACCCTGCAT TACTACAGGGTTATGCCAACCATCAGCAGTGGGTTATGGTGCACGGCTATACCCGCAAGCAAGGTTTGATGATGCGTCCA GATATGCATCACCGCTGCCAGGAGCTGGACAAAGTGTCTCAACAGTCTTGGCGTTGGGTTGCTCGTCAGGCTGGTGCGGG TAGCCAACAACACCTTGAGCAGTGGTTAATGAAGCAAGGTGCTTCATTTGAAGAGCTGAACTCGAGTATTGTAGCTCAAA GTGAACGTGAGCTAGCGGGCTATATTGCTCGCAACAATGCCGATATAGGCTTTGGTTGTCAGTCGGTAGCACTTGAGAGC GGCTTAAGCTTTGTACCGTTAGTCACTGAATCATTTGATTTTGTCATGCCTCAAGGGATCTATTTTAGACGCCAGCTACA AAGACTGTTCAACTTATTAGCTGAGCCACAAACGCAACAACTTGCAGCGACCCTAGGCGGTTATGATTTAACAGATTGTG GGAAGTTGCTCTGGAATGGTCAGTAA
Upstream 100 bases:
>100_bases ACTTCTTAATTTATAACGGTGCAGAGAACGTTGAATTTGATGCACTTTCTTAAGCCAATACCCCTAATATTATCGATAAA ATGCGTGACAAGGAATAATA
Downstream 100 bases:
>100_bases CCCTATCAAGCTGTAATAAGCTAAAACAGCTTATATTGGCTAACTTGGTGAAATATCATTTTCCATAAATCTCGATGCCG TCACCAGATAGAACTGCGTA
Product: DNA-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCHSGMLSDRMHITGSDDPLLSM LVARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLHWGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRP DMHHRCQELDKVSQQSWRWVARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALES GLSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNGQ
Sequences:
>Translated_301_residues MTEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCHSGMLSDRMHITGSDDPLLSM LVARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLHWGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRP DMHHRCQELDKVSQQSWRWVARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALES GLSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNGQ >Mature_300_residues TEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCHSGMLSDRMHITGSDDPLLSML VARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLHWGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRPD MHHRCQELDKVSQQSWRWVARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALESG LSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNGQ
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020817 - InterPro: IPR008284 - InterPro: IPR005111 - InterPro: IPR005110 - InterPro: IPR001453 [H]
Pfam domain/function: PF00994 MoCF_biosynth; PF03454 MoeA_C; PF03453 MoeA_N [H]
EC number: NA
Molecular weight: Translated: 34086; Mature: 33955
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCH CCCCCHHEEHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SGMLSDRMHITGSDDPLLSMLVARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLH CCHHHCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHCCCHHHHEEE WGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRPDMHHRCQELDKVSQQSWRWV CCCCCHHCCCCHHHHHHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH ARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALES HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GLSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNG CCCEEEHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCC Q C >Mature Secondary Structure TEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCH CCCCHHEEHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SGMLSDRMHITGSDDPLLSMLVARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLH CCHHHCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHCCCHHHHEEE WGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRPDMHHRCQELDKVSQQSWRWV CCCCCHHCCCCHHHHHHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH ARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALES HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GLSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNG CCCEEEHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]