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The map label for this gene is 167621972

Identifier: 167621972

GI number: 167621972

Start: 35594

End: 37366

Strand: Reverse

Name: 167621972

Synonym: Shal_0031

Alternate gene names: NA

Gene position: 37366-35594 (Counterclockwise)

Preceding gene: 167621978

Following gene: 167621968

Centisome position: 0.71

GC content: 45.46

Gene sequence:

>1773_bases
ATGAATACACCCTCTAAGTTCGCTATTACTATTATAGCGAGTCTGCTAGCCTCTCTCTCTGGCTGCGCCAGTGTTAAGCA
GCAAAACGCCAACCCACAACTCGTTAATCAGATTAACGCCGCATCAGAAACAGCACTGTTTGATGCCCAAAGCCCACTAT
TAACGACTGATGCGTTTACTCAAGCCAGCTTTGCGCTTGCGAGCAGCAAAGACATTGCGGTGATTGATAAACTGCTTTAC
TACTTTCGAGCCTTCAGTTACTACGGGCCAGTAGATGACTTAAGTGATGCTGATATTGCAGCTTTAGCTGAAGCACTTGA
AGAGATCAGTGATTCTGGACTTCTCGATGTTCAAGTCCGCTTACAAGAGCAATATGCCGTCACCCTATACCGTTATTTTG
CTAATAACGACGCAGCCCCTGCCTTAGCTCCGTTACTGCCTCAGTTAGAGGTACAACTAAAGCAATTGGCAGCATCAACA
CCCAATAAAGCCAATGATTATGCACTACTAGAAACCTTAAAGGCCTATGGATTCTTACTTAACAAGAGCCGCAAAGAGGT
CGATGGTGAACTAAACAAAGTATTGTTAGCTACAGACTTAAACAGCGCCCTTATTGATTTTGCAGCAAGCGCAGAAAGTA
TTCGCGCAAACAACGACTGGCCACGCACTAATGCCTACTGGGCATTAGCCCTTTATCGTTTAGCACTACCATCATCAGAA
GATGGCGAAGACACAGAGCAAGAGCTAGCCCTCGACGCCGCTGTTGCGGCGATTGCTAAAGCCGATGTAACACTTCGTGG
TGATGCCGCTAAAGATGCTTATACTGCAGGCTTTCACGTCAACGTATTTGCTGGCCAAGAACTGTGTGAGGAAAATAGCG
ATATATGCCGTATTCCAGAACTTAAAACCGCGCTCCCCATTGAACATCACTGCTCTGACAGCTTATTTATACTGACTCAA
GATCTCAACGAGCAAGAGCTTGCCGAGAGCTGTAAAAAGCTAACATCACAAGAGTCTAACTTCCACAGTGTGCTAAAAAC
CCAGCTTAAGCCTGCACCAAATGACTTTAATACCGCCCTTAGGGTCGTCGCGTTTAAGAACTGGAGCCAGTACCACCTTA
ATGGCCAGCTCATCTTCGATATCAATACCGATAATGGCGGTATGTATATTGAAGGCACGCCTTCAAAACCCGGCAACCAA
GCGACCTTCTTTGCTTACCGCCAATGGTGGATTGAGCCAGAATTCAAAGTCTGGAATTTGAACCATGAATATGTGCACTA
CCTAGATGGTCACTTTGTAAAATACGCTGGCTTTGGACACTTTCCTGAGAAAATGGTCTGGTGGTCAGAAGGTTTAGCCG
AATACATCTCTAAAGGTGATGACAACCCTTCTGCTCTTCGTGTTATTAAGCGTGACATCGGAGAAGCTCCTACATTAGAA
GAGATCTTTGCCACCGAATATAAAGATGGCCAAGATAGAACCTATAAATGGAGCTACATGGCGATTCGTTTTCTGGTTGA
AAACTACCATAGCGAGTTTGTTCAGCTGAGCCACTACTTGAAAACGGACTACTTTGAAGGCTATGACCAGTTGATGGCCT
CCCTTACTCAGCATCAAGCACAGTTTTCAACTTGGCTAGACACTCAAGTTGGCGAGTTTGATGATAACGAAGAGAAAACT
AAGCCAAGACTGCACAAGCAGGGTCGTTATGACTACCGAGACTATTTGCAGCCACAGCATTTAGCTCATGGCGAGAACCA
CCTGAAGTTCTAG

Upstream 100 bases:

>100_bases
AAGGAATCGATTAAGTTTTATATTCCAGTGTTAGAATTTCGTAAAAAGCAATGATATATTGTATTCAATACAATAAAGGG
ATAAATATAAAGGGATAAAA

Downstream 100 bases:

>100_bases
TCTGTGGCTGAAAAGTTCCCTCCAATCTACCCCTTAAGAACAGGGGCTGCGCTGGAGGGAGTAACAGCTTCTATACACAA
AGCCAATTTGTGTCCATCCA

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MNTPSKFAITIIASLLASLSGCASVKQQNANPQLVNQINAASETALFDAQSPLLTTDAFTQASFALASSKDIAVIDKLLY
YFRAFSYYGPVDDLSDADIAALAEALEEISDSGLLDVQVRLQEQYAVTLYRYFANNDAAPALAPLLPQLEVQLKQLAAST
PNKANDYALLETLKAYGFLLNKSRKEVDGELNKVLLATDLNSALIDFAASAESIRANNDWPRTNAYWALALYRLALPSSE
DGEDTEQELALDAAVAAIAKADVTLRGDAAKDAYTAGFHVNVFAGQELCEENSDICRIPELKTALPIEHHCSDSLFILTQ
DLNEQELAESCKKLTSQESNFHSVLKTQLKPAPNDFNTALRVVAFKNWSQYHLNGQLIFDINTDNGGMYIEGTPSKPGNQ
ATFFAYRQWWIEPEFKVWNLNHEYVHYLDGHFVKYAGFGHFPEKMVWWSEGLAEYISKGDDNPSALRVIKRDIGEAPTLE
EIFATEYKDGQDRTYKWSYMAIRFLVENYHSEFVQLSHYLKTDYFEGYDQLMASLTQHQAQFSTWLDTQVGEFDDNEEKT
KPRLHKQGRYDYRDYLQPQHLAHGENHLKF

Sequences:

>Translated_590_residues
MNTPSKFAITIIASLLASLSGCASVKQQNANPQLVNQINAASETALFDAQSPLLTTDAFTQASFALASSKDIAVIDKLLY
YFRAFSYYGPVDDLSDADIAALAEALEEISDSGLLDVQVRLQEQYAVTLYRYFANNDAAPALAPLLPQLEVQLKQLAAST
PNKANDYALLETLKAYGFLLNKSRKEVDGELNKVLLATDLNSALIDFAASAESIRANNDWPRTNAYWALALYRLALPSSE
DGEDTEQELALDAAVAAIAKADVTLRGDAAKDAYTAGFHVNVFAGQELCEENSDICRIPELKTALPIEHHCSDSLFILTQ
DLNEQELAESCKKLTSQESNFHSVLKTQLKPAPNDFNTALRVVAFKNWSQYHLNGQLIFDINTDNGGMYIEGTPSKPGNQ
ATFFAYRQWWIEPEFKVWNLNHEYVHYLDGHFVKYAGFGHFPEKMVWWSEGLAEYISKGDDNPSALRVIKRDIGEAPTLE
EIFATEYKDGQDRTYKWSYMAIRFLVENYHSEFVQLSHYLKTDYFEGYDQLMASLTQHQAQFSTWLDTQVGEFDDNEEKT
KPRLHKQGRYDYRDYLQPQHLAHGENHLKF
>Mature_590_residues
MNTPSKFAITIIASLLASLSGCASVKQQNANPQLVNQINAASETALFDAQSPLLTTDAFTQASFALASSKDIAVIDKLLY
YFRAFSYYGPVDDLSDADIAALAEALEEISDSGLLDVQVRLQEQYAVTLYRYFANNDAAPALAPLLPQLEVQLKQLAAST
PNKANDYALLETLKAYGFLLNKSRKEVDGELNKVLLATDLNSALIDFAASAESIRANNDWPRTNAYWALALYRLALPSSE
DGEDTEQELALDAAVAAIAKADVTLRGDAAKDAYTAGFHVNVFAGQELCEENSDICRIPELKTALPIEHHCSDSLFILTQ
DLNEQELAESCKKLTSQESNFHSVLKTQLKPAPNDFNTALRVVAFKNWSQYHLNGQLIFDINTDNGGMYIEGTPSKPGNQ
ATFFAYRQWWIEPEFKVWNLNHEYVHYLDGHFVKYAGFGHFPEKMVWWSEGLAEYISKGDDNPSALRVIKRDIGEAPTLE
EIFATEYKDGQDRTYKWSYMAIRFLVENYHSEFVQLSHYLKTDYFEGYDQLMASLTQHQAQFSTWLDTQVGEFDDNEEKT
KPRLHKQGRYDYRDYLQPQHLAHGENHLKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PKD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013510
- InterPro:   IPR002169
- InterPro:   IPR013661
- InterPro:   IPR022409
- InterPro:   IPR000601 [H]

Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD [H]

EC number: =3.4.24.3 [H]

Molecular weight: Translated: 66494; Mature: 66494

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPSKFAITIIASLLASLSGCASVKQQNANPQLVNQINAASETALFDAQSPLLTTDAFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCEECHHHH
QASFALASSKDIAVIDKLLYYFRAFSYYGPVDDLSDADIAALAEALEEISDSGLLDVQVR
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
LQEQYAVTLYRYFANNDAAPALAPLLPQLEVQLKQLAASTPNKANDYALLETLKAYGFLL
EHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
NKSRKEVDGELNKVLLATDLNSALIDFAASAESIRANNDWPRTNAYWALALYRLALPSSE
CCCHHHHCCHHHEEEEEECCCHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
DGEDTEQELALDAAVAAIAKADVTLRGDAAKDAYTAGFHVNVFAGQELCEENSDICRIPE
CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCEECCEEEEEECCHHHHHCCCCEEECCC
LKTALPIEHHCSDSLFILTQDLNEQELAESCKKLTSQESNFHSVLKTQLKPAPNDFNTAL
CHHCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHE
RVVAFKNWSQYHLNGQLIFDINTDNGGMYIEGTPSKPGNQATFFAYRQWWIEPEFKVWNL
EEEEECCCCEEEECCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEEHHCCCCCEEEEEC
NHEYVHYLDGHFVKYAGFGHFPEKMVWWSEGLAEYISKGDDNPSALRVIKRDIGEAPTLE
CHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
EIFATEYKDGQDRTYKWSYMAIRFLVENYHSEFVQLSHYLKTDYFEGYDQLMASLTQHQA
HHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QFSTWLDTQVGEFDDNEEKTKPRLHKQGRYDYRDYLQPQHLAHGENHLKF
HHHHHHHCCCCCCCCCCHHHCCHHHHCCCCCHHHCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MNTPSKFAITIIASLLASLSGCASVKQQNANPQLVNQINAASETALFDAQSPLLTTDAFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCEECHHHH
QASFALASSKDIAVIDKLLYYFRAFSYYGPVDDLSDADIAALAEALEEISDSGLLDVQVR
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
LQEQYAVTLYRYFANNDAAPALAPLLPQLEVQLKQLAASTPNKANDYALLETLKAYGFLL
EHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
NKSRKEVDGELNKVLLATDLNSALIDFAASAESIRANNDWPRTNAYWALALYRLALPSSE
CCCHHHHCCHHHEEEEEECCCHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
DGEDTEQELALDAAVAAIAKADVTLRGDAAKDAYTAGFHVNVFAGQELCEENSDICRIPE
CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCEECCEEEEEECCHHHHHCCCCEEECCC
LKTALPIEHHCSDSLFILTQDLNEQELAESCKKLTSQESNFHSVLKTQLKPAPNDFNTAL
CHHCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHE
RVVAFKNWSQYHLNGQLIFDINTDNGGMYIEGTPSKPGNQATFFAYRQWWIEPEFKVWNL
EEEEECCCCEEEECCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEEHHCCCCCEEEEEC
NHEYVHYLDGHFVKYAGFGHFPEKMVWWSEGLAEYISKGDDNPSALRVIKRDIGEAPTLE
CHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
EIFATEYKDGQDRTYKWSYMAIRFLVENYHSEFVQLSHYLKTDYFEGYDQLMASLTQHQA
HHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QFSTWLDTQVGEFDDNEEKTKPRLHKQGRYDYRDYLQPQHLAHGENHLKF
HHHHHHHCCCCCCCCCCHHHCCHHHHCCCCCHHHCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1311172 [H]