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The map label for this gene is yrdA [H]

Identifier: 167621978

GI number: 167621978

Start: 40938

End: 41495

Strand: Reverse

Name: yrdA [H]

Synonym: Shal_0037

Alternate gene names: 167621978

Gene position: 41495-40938 (Counterclockwise)

Preceding gene: 167621981

Following gene: 167621972

Centisome position: 0.79

GC content: 46.24

Gene sequence:

>558_bases
ATGCCTAGTTCAAGAAACCATAATTCACTGCGCCCGTATAAAGGGATAGTGCCAACACTAAAAAGTAATGTTTATGTTGA
TGAGGCTTGCGTTCTAGTCGGTGATATCACTCTAGATGATGACGCCAGTGTTTGGCCTTTAGTCGCTGCACGGGGTGATG
TTAATCATATCTATATAGGTAAGAGGTCGAACATCCAAGATGGTACCGTGTTGCATGTTACCCGCAAGTCGCCCTCACTA
CCTGACGGTCACCCGCTGATTATTGGGGATGATGTCACGATTGGCCACAAGGCTATGTTGCATGGCTGCCGAGTCGGTAA
TCGTATTTTGGTCGGTATGGGAGCGATCATCTTAGATGGTGCAATATTAGAAGATGATGTCATCCTTGGCGCTGGTTCTC
TCGTACCGCCAGGAAAAGTATTAAAGAGTGGTTTTCTATATGTAGGTAGCCCAGCTAAGCAGGCTCGTCCACTTACAGAT
GCTGAGCTAGCCTTCCTGCCGCAATCTGCTGACAATTATGTCAGGCTGAAGAATGAATATTTGCAAGAAGGTGAGTAA

Upstream 100 bases:

>100_bases
AATAAAACGGTCTATTTATTACTGTTTGCTGACAAAACACCCTGACCAGCTACTTTTTAGGCATTATAATGCAAAAAAAC
GCCATTTTAAGGACTTTTAG

Downstream 100 bases:

>100_bases
ACAAGGGTTAACGACATAGCTTCCTATATCTCCTATATAAAGCCGCTATAAAAGAATAACTTTACCTTGCTCATCGAACG
CCTCCTGTTCGATGAGAGCT

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MPSSRNHNSLRPYKGIVPTLKSNVYVDEACVLVGDITLDDDASVWPLVAARGDVNHIYIGKRSNIQDGTVLHVTRKSPSL
PDGHPLIIGDDVTIGHKAMLHGCRVGNRILVGMGAIILDGAILEDDVILGAGSLVPPGKVLKSGFLYVGSPAKQARPLTD
AELAFLPQSADNYVRLKNEYLQEGE

Sequences:

>Translated_185_residues
MPSSRNHNSLRPYKGIVPTLKSNVYVDEACVLVGDITLDDDASVWPLVAARGDVNHIYIGKRSNIQDGTVLHVTRKSPSL
PDGHPLIIGDDVTIGHKAMLHGCRVGNRILVGMGAIILDGAILEDDVILGAGSLVPPGKVLKSGFLYVGSPAKQARPLTD
AELAFLPQSADNYVRLKNEYLQEGE
>Mature_184_residues
PSSRNHNSLRPYKGIVPTLKSNVYVDEACVLVGDITLDDDASVWPLVAARGDVNHIYIGKRSNIQDGTVLHVTRKSPSLP
DGHPLIIGDDVTIGHKAMLHGCRVGNRILVGMGAIILDGAILEDDVILGAGSLVPPGKVLKSGFLYVGSPAKQARPLTDA
ELAFLPQSADNYVRLKNEYLQEGE

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=175, Percent_Identity=60.5714285714286, Blast_Score=230, Evalue=5e-62,
Organism=Escherichia coli, GI1787667, Length=159, Percent_Identity=35.8490566037736, Blast_Score=106, Evalue=7e-25,
Organism=Escherichia coli, GI87081681, Length=165, Percent_Identity=31.5151515151515, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19843; Mature: 19712

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSRNHNSLRPYKGIVPTLKSNVYVDEACVLVGDITLDDDASVWPLVAARGDVNHIYIG
CCCCCCCCCCCCCCCCCCHHCCCEEECCEEEEEEEEEECCCCCEEEEEEECCCCCEEEEE
KRSNIQDGTVLHVTRKSPSLPDGHPLIIGDDVTIGHKAMLHGCRVGNRILVGMGAIILDG
CCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCHHHCCC
AILEDDVILGAGSLVPPGKVLKSGFLYVGSPAKQARPLTDAELAFLPQSADNYVRLKNEY
EEECCCEEEECCCCCCCHHHHHCCCEEECCCHHHCCCCCCCEEEEECCCCCCEEEECHHH
LQEGE
HCCCC
>Mature Secondary Structure 
PSSRNHNSLRPYKGIVPTLKSNVYVDEACVLVGDITLDDDASVWPLVAARGDVNHIYIG
CCCCCCCCCCCCCCCCCHHCCCEEECCEEEEEEEEEECCCCCEEEEEEECCCCCEEEEE
KRSNIQDGTVLHVTRKSPSLPDGHPLIIGDDVTIGHKAMLHGCRVGNRILVGMGAIILDG
CCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCHHHCCC
AILEDDVILGAGSLVPPGKVLKSGFLYVGSPAKQARPLTDAELAFLPQSADNYVRLKNEY
EEECCCEEEECCCCCCCHHHHHCCCEEECCCHHHCCCCCCCEEEEECCCCCCEEEECHHH
LQEGE
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]