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The map label for this gene is 162148935

Identifier: 162148935

GI number: 162148935

Start: 3251317

End: 3252618

Strand: Direct

Name: 162148935

Synonym: GDI_3165

Alternate gene names: NA

Gene position: 3251317-3252618 (Clockwise)

Preceding gene: 162148934

Following gene: 162148936

Centisome position: 82.43

GC content: 71.89

Gene sequence:

>1302_bases
TTGAACGTCTGCATCATGCCGCACGCGCACGCCAGAGTGACGCTGGCCCATGAGGTCGATTTCGCGGGCTGGCGAACCGC
GACGCGCCGCCTGGTCATGGCCGGCCAGCCCGCCGGGCGGATTGCGTGGCGAATCGACGCGCGCACGGCCGACCCGATCG
AGGACCAGGGCGCCGAAGCACCGGAGGGCAACCCTTTTCACGTATCCCGCGCCCTGCTGGACCTTGCCGAGACCGTCATC
CAGGCGCGCGATCCCGACCGTTTCGCGCTGCTCTACCGGCTGGTCCAGCGCAACGCGGCCGGCGAACGCGACCTGACAAC
CCGCACCGACGACCCCGACATCGCCCGCGCGCTGGTCCTGACCCAGGCGGTGCGGGACGATACCGCCCGCCTGCGCGCGC
ATCTGGAGCTGCCCGCCGAGGACATGGCCATCGGGCAGTGGACTTCGGAGTCCCACGTCCTCGTCCCCAATGCGCGATTC
CTGACCATTCAGCGTTCGCTGCGCCCCTGGGCGGTCTCGACGCCGGACGAAACCCTTCTGTGGACGGGCCGCAGCCTGCA
TCTGCTGCCGCCGGGCACCGACCCGTCCGCCCTGCCCACGGACAGGGAGTCCTGGGAGGGGACGGGCCTGACGCTGCGCC
CCGCCGATCTGCCGCGTCCGGCCCTGCGCCTGACCGAGGGACTGGATATCGCACGGATCGACAGCCTGCCGGCCCTGATC
GCGGCGGCGCGCGACTGCCTGATCTGCCCGATGGCACGCCAGACGACGCAGACGGTCTTCAGCGACGGGCGCCCGGGGGC
CGCGCTGATGCTGGTGGGCGAACAGCCGGGCGACCAGGAGGACCGCGTCGGCCGGCCTTTCGTCGGGCCTGCCGGGCAAT
TGCTGGACCGCACCCTGCACGAGGCCGGGATTACCCGCGATGCCGTCTACGTCACCAACGCGGTCAAGCATTTCCGCTTC
CAGAGGCGCGGCACCCGGCGCCTGCATGAAAAGCCGACCGTGGAAAACGTTACGGCCTGCGCGCCCTGGCTGGCGGCGGA
ACGGCGCATCGTGGCGCCGCGCGTGCTGGTGATGCTGGGCGCCACCGCCGCCGGTGCCGTCCTGGGCCGCAGCGTCACGA
TCGGGCGCGAGCGGTCGCGCCCGATCCCGCTGGCCGACGGGTCGACCGGGCTGGTCACCGTTCATCCGTCCTTCCTGCTG
CGCCAGCCGGACGAGGATGCACGCACCCGGGAATATGCCCGCTTCGTGGCCGATCTGCGCCTGGCGCGGGACCTTCTGCC
GGCGGCCACGCTCCCGTCCTGA

Upstream 100 bases:

>100_bases
GGGCCTACAGCCTGACCGACCCCGTCCGCGCCGGGCAGCCGCCGGTGCGCGAACCGGCCGAACGCGCGGCGCTCTATGCC
ACGCTCGACACAACCGCCGA

Downstream 100 bases:

>100_bases
CCCCGCCGGTCCATGGCTGATGACTGATATGCAGTCTCACCATCGTTACCCTGGGCGTGGTTCTGTTCTATCACAAAACA
CCCCCGTCGCTGCCGGAAGC

Product: uracil-DNA glycosylase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA-Directed DNA Polymerase Protein; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage DNA Polymerase; DNA-Directed DNA Polymerase; Phage Related DNA Polymerase; Uracil DNA Glycosylase Protein; Uracil DNA Glycosylase; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage SPO1 DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Helicase/Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNVCIMPHAHARVTLAHEVDFAGWRTATRRLVMAGQPAGRIAWRIDARTADPIEDQGAEAPEGNPFHVSRALLDLAETVI
QARDPDRFALLYRLVQRNAAGERDLTTRTDDPDIARALVLTQAVRDDTARLRAHLELPAEDMAIGQWTSESHVLVPNARF
LTIQRSLRPWAVSTPDETLLWTGRSLHLLPPGTDPSALPTDRESWEGTGLTLRPADLPRPALRLTEGLDIARIDSLPALI
AAARDCLICPMARQTTQTVFSDGRPGAALMLVGEQPGDQEDRVGRPFVGPAGQLLDRTLHEAGITRDAVYVTNAVKHFRF
QRRGTRRLHEKPTVENVTACAPWLAAERRIVAPRVLVMLGATAAGAVLGRSVTIGRERSRPIPLADGSTGLVTVHPSFLL
RQPDEDARTREYARFVADLRLARDLLPAATLPS

Sequences:

>Translated_433_residues
MNVCIMPHAHARVTLAHEVDFAGWRTATRRLVMAGQPAGRIAWRIDARTADPIEDQGAEAPEGNPFHVSRALLDLAETVI
QARDPDRFALLYRLVQRNAAGERDLTTRTDDPDIARALVLTQAVRDDTARLRAHLELPAEDMAIGQWTSESHVLVPNARF
LTIQRSLRPWAVSTPDETLLWTGRSLHLLPPGTDPSALPTDRESWEGTGLTLRPADLPRPALRLTEGLDIARIDSLPALI
AAARDCLICPMARQTTQTVFSDGRPGAALMLVGEQPGDQEDRVGRPFVGPAGQLLDRTLHEAGITRDAVYVTNAVKHFRF
QRRGTRRLHEKPTVENVTACAPWLAAERRIVAPRVLVMLGATAAGAVLGRSVTIGRERSRPIPLADGSTGLVTVHPSFLL
RQPDEDARTREYARFVADLRLARDLLPAATLPS
>Mature_433_residues
MNVCIMPHAHARVTLAHEVDFAGWRTATRRLVMAGQPAGRIAWRIDARTADPIEDQGAEAPEGNPFHVSRALLDLAETVI
QARDPDRFALLYRLVQRNAAGERDLTTRTDDPDIARALVLTQAVRDDTARLRAHLELPAEDMAIGQWTSESHVLVPNARF
LTIQRSLRPWAVSTPDETLLWTGRSLHLLPPGTDPSALPTDRESWEGTGLTLRPADLPRPALRLTEGLDIARIDSLPALI
AAARDCLICPMARQTTQTVFSDGRPGAALMLVGEQPGDQEDRVGRPFVGPAGQLLDRTLHEAGITRDAVYVTNAVKHFRF
QRRGTRRLHEKPTVENVTACAPWLAAERRIVAPRVLVMLGATAAGAVLGRSVTIGRERSRPIPLADGSTGLVTVHPSFLL
RQPDEDARTREYARFVADLRLARDLLPAATLPS

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 47557; Mature: 47557

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVCIMPHAHARVTLAHEVDFAGWRTATRRLVMAGQPAGRIAWRIDARTADPIEDQGAEA
CCEEECCCCCCEEEEEEECCCCHHHHHHHEEEEECCCCCCEEEEEECCCCCCCHHCCCCC
PEGNPFHVSRALLDLAETVIQARDPDRFALLYRLVQRNAAGERDLTTRTDDPDIARALVL
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
TQAVRDDTARLRAHLELPAEDMAIGQWTSESHVLVPNARFLTIQRSLRPWAVSTPDETLL
HHHHHHHHHHHHHHCCCCHHHCEEECCCCCCEEECCCCEEEEEECCCCCCEECCCCCEEE
WTGRSLHLLPPGTDPSALPTDRESWEGTGLTLRPADLPRPALRLTEGLDIARIDSLPALI
ECCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHCCCCEEHHHHHHHHH
AAARDCLICPMARQTTQTVFSDGRPGAALMLVGEQPGDQEDRVGRPFVGPAGQLLDRTLH
HHHHHHEECCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCCCHHHHHHHHHH
EAGITRDAVYVTNAVKHFRFQRRGTRRLHEKPTVENVTACAPWLAAERRIVAPRVLVMLG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEHHC
ATAAGAVLGRSVTIGRERSRPIPLADGSTGLVTVHPSFLLRQPDEDARTREYARFVADLR
CHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEECCHHEEECCCCHHHHHHHHHHHHHHH
LARDLLPAATLPS
HHHHHHCCCCCCC
>Mature Secondary Structure
MNVCIMPHAHARVTLAHEVDFAGWRTATRRLVMAGQPAGRIAWRIDARTADPIEDQGAEA
CCEEECCCCCCEEEEEEECCCCHHHHHHHEEEEECCCCCCEEEEEECCCCCCCHHCCCCC
PEGNPFHVSRALLDLAETVIQARDPDRFALLYRLVQRNAAGERDLTTRTDDPDIARALVL
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
TQAVRDDTARLRAHLELPAEDMAIGQWTSESHVLVPNARFLTIQRSLRPWAVSTPDETLL
HHHHHHHHHHHHHHCCCCHHHCEEECCCCCCEEECCCCEEEEEECCCCCCEECCCCCEEE
WTGRSLHLLPPGTDPSALPTDRESWEGTGLTLRPADLPRPALRLTEGLDIARIDSLPALI
ECCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHCCCCEEHHHHHHHHH
AAARDCLICPMARQTTQTVFSDGRPGAALMLVGEQPGDQEDRVGRPFVGPAGQLLDRTLH
HHHHHHEECCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCCCHHHHHHHHHH
EAGITRDAVYVTNAVKHFRFQRRGTRRLHEKPTVENVTACAPWLAAERRIVAPRVLVMLG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEHHC
ATAAGAVLGRSVTIGRERSRPIPLADGSTGLVTVHPSFLLRQPDEDARTREYARFVADLR
CHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEECCHHEEECCCCHHHHHHHHHHHHHHH
LARDLLPAATLPS
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA