Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
---|---|
Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is yhcP [C]
Identifier: 162148936
GI number: 162148936
Start: 3252727
End: 3254916
Strand: Direct
Name: yhcP [C]
Synonym: GDI_3166
Alternate gene names: 162148936
Gene position: 3252727-3254916 (Clockwise)
Preceding gene: 162148935
Following gene: 162148937
Centisome position: 82.47
GC content: 68.13
Gene sequence:
>2190_bases GTGCCTGTTTTTCCCTCGTCTTTGACCCCCATGCTGACGCGTCTGGCGTGCTGGCGGCCACCGAGCATCCGGCCGCCCGG CTATGCGCGGATGAGCGGCCTCAAGTGGCTCTACGCCCCGAAGGGCGAGGCGATCGGTTTCGCGGTACGCACCACGATCG CGGCACTGCTGTCCCTGCTGCTGGCGATGTGGATGGAACTGGACAGCCCGCAATGGGCGCCGATGACGGTATGGATCGTG GCCCAGGGGTCGCGCGGCGAAAGCCTGTCGAAGGCCCGCTGGCGCCTGGTCGGCACCGCCATCGGCGCCACCTCCGCCGT GGTCCTGATCGCGGCCTTTCCCCAGGCGCCATGGCTGTTTTTTCCCGCGATCGGCATATGGATCGGCCTGTGCTGCGGGC TGGCGACGCTGGTGCGGAACTTCCGGTCCTACGCACTGGTGCTGTCGGGCTATTCCTGCGCCATCGTCGCACTGGACGCC ATCCGCAGCCCCGACGACGTGTTCATGATCGCGATGTCGCGCTCGACCTACATCGTACTGGGCATCGTCTGCGAAAGCCT GGTCGCCGGGCTGTTTTCCCATAACCTGGCGGAAACCGCGCGCCGCAACATCCGTGAAAAGCTGCAGACGGCGCTGTCCA GCAGTTCGTCCGCCATCGCCGACCTGCTGGCCGGCGACCAGCAGGCCTTCATCCGGTCGCGCGCCCTGTTCGGCACCATC CTGACCATCAACGACCAGATCGAGTTCAGCGAGGTCGAGATGGGCCCCCACGGGCACGAGGGCGACCATGCCCGCGCCGC CCTGGCGGCCGTGTCCGTGCTGCTGTCGCGCGGCTTGGGCATGACCGCGCGCATGCGTGCGCTGGGCGTGCCGCACCAGA CGTTCACCGAGACATCGCTGCTGGTGCGCACCTATCTGCAGGGGCTGCCGCAGCGCCTGAAGCGCGACGAGGACGTCCTG GCCGCGATCGACGATCTGCGCGCCCTGCGCGGCGTGTGCCGCCAGCAGGTGGTCAATGCCCTGACCGAGGAAAGCAACGG CCGGTATCCTGCCGACGGCCCGGAAATCCAGGCCCTGCTGGACCTGCGCATCCTGCACAGCGCGCTGGAGGAACTGCTGG CGGAACTGCAGCAGGCGATCCGGGAATTCGACGCCAGCCAGCATGTCATTCGCGGCGACCATTTCCATTTCCGCCTGCAA TCCCATCGCGACCTGAAGGAAGCGGCCCATAACGGCATCCGCGCCGCGGTGGCCATCACCTGCGCCGGCCTGATATGGGA AGTCACCGCGTGGTCCAACGGCCTGCCCTTCATCACCATGGTCGCCCTGACCTGCGGCCTGTTCGCCACGCGCGAAAACC CGGTGCTGGGCACGATGAACTTCCTGCGCGGGGCGATGTGGTCGGTGGCCGCGTCCTTCATACTGGTCATGCTGCTGCTG CCCCGCCCGGCCGACCCGGAAATGCTGGCGGCCTGCCTGGCGCTGCCGATGATCGCGGGGGGGCTCGCCACCCGCAACCC GGCCACGGCGGGGGCGGCCGCCGCCTATACGCTCTTCCTGCCCCACCTGGTCGGGCCGTCCAACCAGGGACGCCTGAACG AGATCGCGTATTTCAATTCCGCGTTCTCGCTGCTGTGCAGCATCGGCTTCTCGGTCCTGATCTTCCGCACGATCCTGCCC TTCAGCAGCGCCCGCGAACGCTGGCGGATGCGCAACCGCAACCTGCACGACCTGCGCCACCTGGCATCCGCCCTTCCGGT GCCGCAGACCCGCGACTGGATCGGGCGCAACACCGACCGCTTCTCGCGCCTGATCCGCCACGCCGGCCCTACCCCCACCC CGACCATCGAGGCCTATCTGCAAGGCACGCTGTCGGTGATGACGATCGGCCTGAACGTCATCCGCCTGCGCACCGTGCTG GCCCGGGACCAGTTGCCGCTGTCCGCCCGGCGGCCGATTACCGTGGTGCTGGGCCGCATGGCGCAACTGACCGGACGCTA CGGCCGCACCGCACGCTCGGCCCGGGTCGCCACCGCCAGCCTGCGCCGGATCGAGGCCCGCGAGGCCAATATCGGCGCGC GCATCGAAATGACCCGCGCCATCGCGTACCTGCTGGTCATCTCATACGAACTGGATGCCAACGCCGCCTTCCTGGACGCG TCGAAACCCTATCGAATCGCCCAGTCCTGA
Upstream 100 bases:
>100_bases GTCCATGGCTGATGACTGATATGCAGTCTCACCATCGTTACCCTGGGCGTGGTTCTGTTCTATCACAAAACACCCCCGTC GCTGCCGGAAGCCGTGCATC
Downstream 100 bases:
>100_bases CCGGCTTCCAATGGCCGGACGAAACAGGCAAGACTGACCGGCAATTCCCGAGTGCCGAGCCCCGATCATGACATCGCCCC CGTCCGCCCCACCCCGCCGC
Product: fusaric acid resistence protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MPVFPSSLTPMLTRLACWRPPSIRPPGYARMSGLKWLYAPKGEAIGFAVRTTIAALLSLLLAMWMELDSPQWAPMTVWIV AQGSRGESLSKARWRLVGTAIGATSAVVLIAAFPQAPWLFFPAIGIWIGLCCGLATLVRNFRSYALVLSGYSCAIVALDA IRSPDDVFMIAMSRSTYIVLGIVCESLVAGLFSHNLAETARRNIREKLQTALSSSSSAIADLLAGDQQAFIRSRALFGTI LTINDQIEFSEVEMGPHGHEGDHARAALAAVSVLLSRGLGMTARMRALGVPHQTFTETSLLVRTYLQGLPQRLKRDEDVL AAIDDLRALRGVCRQQVVNALTEESNGRYPADGPEIQALLDLRILHSALEELLAELQQAIREFDASQHVIRGDHFHFRLQ SHRDLKEAAHNGIRAAVAITCAGLIWEVTAWSNGLPFITMVALTCGLFATRENPVLGTMNFLRGAMWSVAASFILVMLLL PRPADPEMLAACLALPMIAGGLATRNPATAGAAAAYTLFLPHLVGPSNQGRLNEIAYFNSAFSLLCSIGFSVLIFRTILP FSSARERWRMRNRNLHDLRHLASALPVPQTRDWIGRNTDRFSRLIRHAGPTPTPTIEAYLQGTLSVMTIGLNVIRLRTVL ARDQLPLSARRPITVVLGRMAQLTGRYGRTARSARVATASLRRIEAREANIGARIEMTRAIAYLLVISYELDANAAFLDA SKPYRIAQS
Sequences:
>Translated_729_residues MPVFPSSLTPMLTRLACWRPPSIRPPGYARMSGLKWLYAPKGEAIGFAVRTTIAALLSLLLAMWMELDSPQWAPMTVWIV AQGSRGESLSKARWRLVGTAIGATSAVVLIAAFPQAPWLFFPAIGIWIGLCCGLATLVRNFRSYALVLSGYSCAIVALDA IRSPDDVFMIAMSRSTYIVLGIVCESLVAGLFSHNLAETARRNIREKLQTALSSSSSAIADLLAGDQQAFIRSRALFGTI LTINDQIEFSEVEMGPHGHEGDHARAALAAVSVLLSRGLGMTARMRALGVPHQTFTETSLLVRTYLQGLPQRLKRDEDVL AAIDDLRALRGVCRQQVVNALTEESNGRYPADGPEIQALLDLRILHSALEELLAELQQAIREFDASQHVIRGDHFHFRLQ SHRDLKEAAHNGIRAAVAITCAGLIWEVTAWSNGLPFITMVALTCGLFATRENPVLGTMNFLRGAMWSVAASFILVMLLL PRPADPEMLAACLALPMIAGGLATRNPATAGAAAAYTLFLPHLVGPSNQGRLNEIAYFNSAFSLLCSIGFSVLIFRTILP FSSARERWRMRNRNLHDLRHLASALPVPQTRDWIGRNTDRFSRLIRHAGPTPTPTIEAYLQGTLSVMTIGLNVIRLRTVL ARDQLPLSARRPITVVLGRMAQLTGRYGRTARSARVATASLRRIEAREANIGARIEMTRAIAYLLVISYELDANAAFLDA SKPYRIAQS >Mature_728_residues PVFPSSLTPMLTRLACWRPPSIRPPGYARMSGLKWLYAPKGEAIGFAVRTTIAALLSLLLAMWMELDSPQWAPMTVWIVA QGSRGESLSKARWRLVGTAIGATSAVVLIAAFPQAPWLFFPAIGIWIGLCCGLATLVRNFRSYALVLSGYSCAIVALDAI RSPDDVFMIAMSRSTYIVLGIVCESLVAGLFSHNLAETARRNIREKLQTALSSSSSAIADLLAGDQQAFIRSRALFGTIL TINDQIEFSEVEMGPHGHEGDHARAALAAVSVLLSRGLGMTARMRALGVPHQTFTETSLLVRTYLQGLPQRLKRDEDVLA AIDDLRALRGVCRQQVVNALTEESNGRYPADGPEIQALLDLRILHSALEELLAELQQAIREFDASQHVIRGDHFHFRLQS HRDLKEAAHNGIRAAVAITCAGLIWEVTAWSNGLPFITMVALTCGLFATRENPVLGTMNFLRGAMWSVAASFILVMLLLP RPADPEMLAACLALPMIAGGLATRNPATAGAAAAYTLFLPHLVGPSNQGRLNEIAYFNSAFSLLCSIGFSVLIFRTILPF SSARERWRMRNRNLHDLRHLASALPVPQTRDWIGRNTDRFSRLIRHAGPTPTPTIEAYLQGTLSVMTIGLNVIRLRTVLA RDQLPLSARRPITVVLGRMAQLTGRYGRTARSARVATASLRRIEAREANIGARIEMTRAIAYLLVISYELDANAAFLDAS KPYRIAQS
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=187, Percent_Identity=30.4812834224599, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1787933, Length=530, Percent_Identity=23.0188679245283, Blast_Score=73, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 79843; Mature: 79712
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVFPSSLTPMLTRLACWRPPSIRPPGYARMSGLKWLYAPKGEAIGFAVRTTIAALLSLL CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHH LAMWMELDSPQWAPMTVWIVAQGSRGESLSKARWRLVGTAIGATSAVVLIAAFPQAPWLF HHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHH FPAIGIWIGLCCGLATLVRNFRSYALVLSGYSCAIVALDAIRSPDDVFMIAMSRSTYIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCEEEEEECCCCEEHH GIVCESLVAGLFSHNLAETARRNIREKLQTALSSSSSAIADLLAGDQQAFIRSRALFGTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHEEE LTINDQIEFSEVEMGPHGHEGDHARAALAAVSVLLSRGLGMTARMRALGVPHQTFTETSL EEECCCEEEEHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHH LVRTYLQGLPQRLKRDEDVLAAIDDLRALRGVCRQQVVNALTEESNGRYPADGPEIQALL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH DLRILHSALEELLAELQQAIREFDASQHVIRGDHFHFRLQSHRDLKEAAHNGIRAAVAIT HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEEHHCCHHHHHHHCCHHHHHHHH CAGLIWEVTAWSNGLPFITMVALTCGLFATRENPVLGTMNFLRGAMWSVAASFILVMLLL HHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PRPADPEMLAACLALPMIAGGLATRNPATAGAAAAYTLFLPHLVGPSNQGRLNEIAYFNS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AFSLLCSIGFSVLIFRTILPFSSARERWRMRNRNLHDLRHLASALPVPQTRDWIGRNTDR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCHHH FSRLIRHAGPTPTPTIEAYLQGTLSVMTIGLNVIRLRTVLARDQLPLSARRPITVVLGRM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AQLTGRYGRTARSARVATASLRRIEAREANIGARIEMTRAIAYLLVISYELDANAAFLDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCEEEEEC SKPYRIAQS CCCCCCCCC >Mature Secondary Structure PVFPSSLTPMLTRLACWRPPSIRPPGYARMSGLKWLYAPKGEAIGFAVRTTIAALLSLL CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHH LAMWMELDSPQWAPMTVWIVAQGSRGESLSKARWRLVGTAIGATSAVVLIAAFPQAPWLF HHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHH FPAIGIWIGLCCGLATLVRNFRSYALVLSGYSCAIVALDAIRSPDDVFMIAMSRSTYIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCEEEEEECCCCEEHH GIVCESLVAGLFSHNLAETARRNIREKLQTALSSSSSAIADLLAGDQQAFIRSRALFGTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHEEE LTINDQIEFSEVEMGPHGHEGDHARAALAAVSVLLSRGLGMTARMRALGVPHQTFTETSL EEECCCEEEEHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHH LVRTYLQGLPQRLKRDEDVLAAIDDLRALRGVCRQQVVNALTEESNGRYPADGPEIQALL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH DLRILHSALEELLAELQQAIREFDASQHVIRGDHFHFRLQSHRDLKEAAHNGIRAAVAIT HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEEHHCCHHHHHHHCCHHHHHHHH CAGLIWEVTAWSNGLPFITMVALTCGLFATRENPVLGTMNFLRGAMWSVAASFILVMLLL HHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PRPADPEMLAACLALPMIAGGLATRNPATAGAAAAYTLFLPHLVGPSNQGRLNEIAYFNS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AFSLLCSIGFSVLIFRTILPFSSARERWRMRNRNLHDLRHLASALPVPQTRDWIGRNTDR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCHHH FSRLIRHAGPTPTPTIEAYLQGTLSVMTIGLNVIRLRTVLARDQLPLSARRPITVVLGRM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AQLTGRYGRTARSARVATASLRRIEAREANIGARIEMTRAIAYLLVISYELDANAAFLDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCEEEEEC SKPYRIAQS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9055427 [H]